Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 3.3e-206 721.5 358 100.0
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 2.1e-136 489.6 334 73.1
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 1.4e-52 211.1 284 44.7
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 2.7e-51 206.8 231 48.1
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.0e-50 204.9 230 48.3
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.3e-50 204.5 231 48.1
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 3.3e-49 199.9 211 50.7
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 7.3e-49 198.7 217 48.4
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 9.6e-49 198.4 217 48.8
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 9.6e-49 198.4 209 48.8
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 1.3e-48 198.0 213 50.2
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 1.3e-48 198.0 207 50.7
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 3.6e-48 196.4 207 48.8
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 3.6e-48 196.4 211 47.4
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 4.8e-48 196.1 211 50.7
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 6.2e-48 195.7 213 48.8
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 6.2e-48 195.7 216 50.5
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 2.4e-47 193.7 179 53.6
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 4.0e-47 193.0 264 40.5
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 6.9e-47 192.2 235 46.4
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 9.0e-47 191.8 206 50.0
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 2.0e-46 190.7 239 46.0
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 3.4e-46 189.9 217 47.5
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 4.5e-46 189.5 216 47.7
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 4.5e-46 189.5 217 48.4
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 7.6e-46 188.7 229 44.1
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 9.9e-46 188.3 239 44.8
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 1.3e-45 188.0 207 48.3
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 1.3e-45 188.0 226 46.0
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 1.7e-45 187.6 225 46.7
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 1.7e-45 187.6 214 46.7
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 1.7e-45 187.6 253 43.5
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 1.7e-45 187.6 221 45.7
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 2.2e-45 187.2 229 45.0
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 2.9e-45 186.8 217 46.1
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 3.8e-45 186.4 229 45.4
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 4.9e-45 186.0 220 45.5
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 6.4e-45 185.7 218 46.3
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 8.4e-45 185.3 218 46.3
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 8.4e-45 185.3 217 46.1
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 8.4e-45 185.3 218 45.9
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 8.4e-45 185.3 219 46.6
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 1.1e-44 184.9 208 48.6
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 1.1e-44 184.9 230 45.7
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 1.4e-44 184.5 214 47.7
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 1.4e-44 184.5 219 43.8
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 1.4e-44 184.5 219 43.8
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 1.4e-44 184.5 234 44.0
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 2.4e-44 183.7 216 44.9
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 2.4e-44 183.7 211 47.4
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 2.4e-44 183.7 222 44.1
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 2.4e-44 183.7 222 45.5
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 3.2e-44 183.3 212 44.3
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 3.2e-44 183.3 206 46.1
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 3.2e-44 183.3 223 46.2
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 4.2e-44 183.0 214 45.3
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 4.2e-44 183.0 214 45.8
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 7.1e-44 182.2 214 46.3
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 7.1e-44 182.2 223 45.7
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 9.3e-44 181.8 208 45.2
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 9.3e-44 181.8 218 46.8
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 1.2e-43 181.4 210 46.7
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 1.6e-43 181.0 217 45.6
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 1.6e-43 181.0 213 45.5
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 1.6e-43 181.0 225 45.8
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 2.1e-43 180.6 225 45.8
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 2.1e-43 180.6 216 44.4
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 2.7e-43 180.3 212 45.3
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 2.7e-43 180.3 235 43.8
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 3.5e-43 179.9 224 44.6
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 6.0e-43 179.1 223 45.7
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 7.9e-43 178.7 225 46.2
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 7.9e-43 178.7 212 43.4
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 1.0e-42 178.3 249 41.4
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.3e-42 177.9 225 44.4
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.3e-42 177.9 225 44.4
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 2.3e-42 177.2 216 44.0
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 2.3e-42 177.2 216 44.0
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 3.0e-42 176.8 224 45.1
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 3.0e-42 176.8 242 40.1
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 6.7e-42 175.6 231 43.3
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 6.7e-42 175.6 226 44.2
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 8.7e-42 175.3 249 43.4
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 1.1e-41 174.9 218 44.0
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 2.5e-41 173.7 208 47.1
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 2.5e-41 173.7 216 46.8
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 2.5e-41 173.7 245 41.6
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 5.6e-41 172.6 226 44.2
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 7.4e-41 172.2 214 44.9
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 9.6e-41 171.8 220 42.7
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 1.3e-40 171.4 176 48.9
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 1.3e-40 171.4 241 41.9
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 1.6e-40 171.0 225 42.2
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 8.1e-40 168.7 249 41.4
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.1e-39 168.3 263 40.7
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 1.4e-39 167.9 201 43.3
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 1.4e-39 167.9 201 43.3
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.4e-39 167.9 256 40.2
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 2.4e-39 167.2 212 45.3
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 3.1e-39 166.8 226 42.9
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 5.3e-39 166.0 235 42.1
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 2.6e-38 163.7 222 41.9
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 2.6e-38 163.7 229 41.5
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 7.6e-38 162.2 185 45.9
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 4.2e-36 156.4 269 36.4
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 7.1e-36 155.6 259 37.8
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 1.6e-35 154.5 210 42.4
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 7.9e-35 152.1 256 37.5
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 2.3e-34 150.6 190 44.2
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 3.0e-34 150.2 237 41.8
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 8.7e-34 148.7 184 44.0
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 9.6e-33 145.2 240 38.3
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 8.2e-32 142.1 232 40.5
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 6.9e-31 139.0 134 55.2
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 3.4e-30 136.7 216 38.0
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 3.4e-30 136.7 134 54.5
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 1.1e-28 131.7 228 40.4
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 3.1e-23 113.6 138 42.0
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 9.0e-23 112.1 237 32.9
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 2.6e-22 110.5 171 38.6
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 7.2e-20 102.4 141 36.2
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 7.7e-14 82.4 76 60.5
PRCOL_00005055 Prasinoderma coloniale HOM05D006231 ORTHO05D007857 2.9e-13 80.5 116 37.9
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 4.2e-12 76.6 87 48.3
Cre10.g464750 Chlamydomonas reinhardtii HOM05D006231 ORTHO05D007857 6.7e-10 69.3 215 28.4
SEGI_15474 Sequoiadendron giganteum HOM05D002510 ORTHO05D006928 4.8e-08 63.2 94 35.1
Ah.03g147260 Amaranthus hybridus HOM05D004023 ORTHO05D004681 2.6e-06 57.4 78 38.5
MCO01G772 Micromonas commoda HOM05D006231 ORTHO05D267820 3.5e-06 57.0 161 28.0
THA.LOC104811821 Tarenaya hassleriana HOM05D005733 ORTHO05D007442 3.5e-06 57.0 59 39.0
SalBow6G0174 Salvia bowleyana HOM05D005733 ORTHO05D007442 4.5e-06 56.6 62 35.5


User provided reference genes

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