Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36660 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 3.6e-103 378.3 188 100.0
SEGI_15996 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 3.0e-41 172.6 149 62.4
SEGI_10233 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 7.8e-34 147.9 119 63.0
SEGI_40184 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.3e-32 142.1 123 61.0
SEGI_12086 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 7.6e-29 131.3 119 58.0
SEGI_33422 Sequoiadendron giganteum HOM05D001189 ORTHO05D001027 5.6e-24 115.2 107 58.9
SEGI_38234 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 1.8e-22 110.2 133 46.6
SEGI_32162 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 3.4e-21 105.9 115 49.6
SEGI_39015 Sequoiadendron giganteum HOM05D013116 ORTHO05D009660 3.4e-21 105.9 109 50.5
SEGI_40779 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 1.9e-19 100.1 66 65.2
SEGI_33819 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 2.4e-19 99.8 107 44.9
SEGI_30636 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 6.6e-17 91.7 120 40.0
SEGI_14987 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 8.7e-17 91.3 146 42.5
SEGI_30517 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.8e-15 85.5 60 76.7
SEGI_28128 Sequoiadendron giganteum HOM05D000190 ORTHO05D000113 1.4e-14 84.0 45 80.0
SEGI_36347 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 2.6e-13 79.7 127 36.2
SEGI_20393 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 5.8e-13 78.6 114 36.8
SEGI_02366 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 7.6e-13 78.2 95 41.1
SEGI_07285 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 7.6e-13 78.2 59 54.2
SEGI_14537 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 9.9e-13 77.8 86 45.3
SEGI_30488 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 9.9e-13 77.8 93 41.9
SEGI_25517 Sequoiadendron giganteum HOM05D000764 ORTHO05D002819 1.3e-12 77.4 89 41.6
SEGI_17339 Sequoiadendron giganteum HOM05D000028 ORTHO05D000296 6.4e-12 75.1 49 63.3
SEGI_28582 Sequoiadendron giganteum HOM05D000060 ORTHO05D000563 8.4e-12 74.7 85 40.0
SEGI_29275 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 1.4e-11 73.9 65 49.2
SEGI_16637 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 1.9e-11 73.6 99 41.4
SEGI_39453 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 4.2e-11 72.4 90 35.6
SEGI_28996 Sequoiadendron giganteum HOM05D013116 ORTHO05D000563 5.4e-11 72.0 124 36.3
SEGI_37743 Sequoiadendron giganteum HOM05D002691 ORTHO05D003304 9.3e-11 71.2 108 37.0
SEGI_08797 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 1.2e-10 70.9 65 49.2
SEGI_34549 Sequoiadendron giganteum HOM05D000190 ORTHO05D000113 1.2e-10 70.9 47 61.7
SEGI_23514 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 1.6e-10 70.5 65 49.2
SEGI_28867 Sequoiadendron giganteum HOM05D013116 ORTHO05D012902 1.6e-10 70.5 103 35.9
Rhsim08G0083200 Rhododendron simsii HOM05D003191 ORTHO05D003656 2.1e-10 70.1 93 36.6
SEGI_31807 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 3.5e-10 69.3 65 44.6
SEGI_18132 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 4.6e-10 68.9 65 49.2
SEGI_20878 Sequoiadendron giganteum HOM05D001711 ORTHO05D002211 4.6e-10 68.9 129 35.7
SEGI_26381 Sequoiadendron giganteum HOM05D001575 ORTHO05D001536 6.0e-10 68.6 65 47.7
SEGI_35868 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 6.0e-10 68.6 65 46.2
Rhsim05G0179000 Rhododendron simsii HOM05D011528 ORTHO05D015218 7.9e-10 68.2 116 33.6
SEGI_09627 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 1.0e-09 67.8 77 36.4
SEGI_13762 Sequoiadendron giganteum HOM05D000304 ORTHO05D009660 1.0e-09 67.8 88 40.9
SEGI_17572 Sequoiadendron giganteum HOM05D000103 ORTHO05D000049 1.0e-09 67.8 129 31.0
SEGI_41168 Sequoiadendron giganteum HOM05D000756 ORTHO05D000604 1.3e-09 67.4 130 33.8
RhsimUnG0084300 Rhododendron simsii HOM05D011528 ORTHO05D000563 3.9e-09 65.9 140 32.9
SabraUnG0000900 Salix brachista HOM05D000004 ORTHO05D000002 3.9e-09 65.9 124 28.2
SEGI_05302 Sequoiadendron giganteum HOM05D013116 ORTHO05D012902 3.9e-09 65.9 76 38.2
Thecc.01G105600 Theobroma cacao HOM05D000004 ORTHO05D000563 3.9e-09 65.9 118 31.4
Prupe.5G246300 Prunus persica HOM05D000004 ORTHO05D000002 6.7e-09 65.1 59 44.1
Rhsim08G0083300 Rhododendron simsii HOM05D003134 ORTHO05D003500 1.5e-08 63.9 105 32.4
Sabra11G0010700 Salix brachista HOM05D000004 ORTHO05D009927 1.5e-08 63.9 142 31.7
Sabra19G0020900 Salix brachista HOM05D000004 ORTHO05D000002 1.9e-08 63.5 124 27.4
SEGI_29563 Sequoiadendron giganteum HOM05D004901 ORTHO05D005592 1.9e-08 63.5 104 32.7
PSO063G2514 Papaver somniferum HOM05D000004 ORTHO05D000002 2.5e-08 63.2 55 47.3
SEGI_34073 Sequoiadendron giganteum HOM05D018818 ORTHO05D014682 3.3e-08 62.8 106 36.8
SEGI_14568 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 4.3e-08 62.4 70 40.0
SEGI_33440 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 4.3e-08 62.4 95 38.9
PSO339G5592 Papaver somniferum HOM05D000004 ORTHO05D000002 5.6e-08 62.0 55 43.6
Dinv38966 Davidia involucrata HOM05D000151 ORTHO05D000074 7.4e-08 61.6 52 46.2
PSO063G0930 Papaver somniferum HOM05D000004 ORTHO05D000002 7.4e-08 61.6 50 48.0
PSO541G3038 Papaver somniferum HOM05D000004 ORTHO05D000563 7.4e-08 61.6 56 42.9
PSO478G0516 Papaver somniferum HOM05D000004 ORTHO05D000002 9.6e-08 61.2 142 35.2
PSO832G1137 Papaver somniferum HOM05D000004 ORTHO05D000002 9.6e-08 61.2 56 41.1
PGR083G1481 Punica granatum HOM05D000004 ORTHO05D000002 1.3e-07 60.8 51 43.1
SEGI_08757 Sequoiadendron giganteum HOM05D013116 ORTHO05D009660 1.3e-07 60.8 133 32.3
SEGI_28814 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 1.3e-07 60.8 52 42.3
PGR119G2216 Punica granatum HOM05D000004 ORTHO05D000563 1.6e-07 60.5 51 47.1
Hma1.2p1_1811F.1_g303630 Hydrangea macrophylla HOM05D011119 ORTHO05D011737 2.1e-07 60.1 59 44.1
PSO063G1779 Papaver somniferum HOM05D000004 ORTHO05D000002 2.1e-07 60.1 55 43.6
PSO675G7964 Papaver somniferum HOM05D000004 ORTHO05D000002 2.1e-07 60.1 51 45.1
PGR083G2793 Punica granatum HOM05D000004 ORTHO05D000002 2.1e-07 60.1 134 32.1
PGR102G0017 Punica granatum HOM05D000004 ORTHO05D000002 2.1e-07 60.1 51 43.1
SEGI_10937 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 2.1e-07 60.1 68 44.1
TAR135G0002 Trochodendron aralioides HOM05D000004 ORTHO05D000002 2.1e-07 60.1 52 42.3
FvH4_4g08352 Fragaria vesca HOM05D000004 ORTHO05D000002 2.8e-07 59.7 53 45.3
PSO170G4806 Papaver somniferum HOM05D000004 ORTHO05D000563 2.8e-07 59.7 51 47.1
PSO675G1879 Papaver somniferum HOM05D000004 ORTHO05D000002 2.8e-07 59.7 55 41.8
Hund17948 Selenicereus undatus HOM05D036855 ORTHO05D011737 2.8e-07 59.7 59 44.1
SEGI_33560 Sequoiadendron giganteum HOM05D000991 ORTHO05D000563 2.8e-07 59.7 98 31.6
PSO170G4300 Papaver somniferum HOM05D000004 ORTHO05D000002 3.7e-07 59.3 51 45.1
Rhsim03G0243100 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.7e-07 59.3 58 44.8
Actinidia10157 Actinidia chinensis HOM05D000124 ORTHO05D009660 4.8e-07 58.9 52 44.2
Sabra15G0032500 Salix brachista HOM05D004254 ORTHO05D000563 4.8e-07 58.9 128 26.6
FvH4_3g23752 Fragaria vesca HOM05D000004 ORTHO05D014643 6.2e-07 58.5 102 33.3
FvH4_5g27471 Fragaria vesca HOM05D000004 ORTHO05D000563 6.2e-07 58.5 102 33.3
FvH4_5g28291 Fragaria vesca HOM05D000004 ORTHO05D000563 6.2e-07 58.5 102 33.3
FvH4_c2g00053 Fragaria vesca HOM05D000004 ORTHO05D000563 6.2e-07 58.5 102 33.3
Rhsim04G0098200 Rhododendron simsii HOM05D000004 ORTHO05D000563 6.2e-07 58.5 53 43.4
TAR143G0002 Trochodendron aralioides HOM05D000004 ORTHO05D000563 6.2e-07 58.5 51 49.0
Atru.chr6.2464 Acer truncatum HOM05D000004 ORTHO05D000563 8.1e-07 58.2 52 42.3
CSS0030845 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.1e-07 58.2 58 44.8
CAN.G249.16 Capsicum annuum HOM05D008382 ORTHO05D009660 8.1e-07 58.2 51 45.1
CiPaw.14G083400 Carya illinoinensis HOM05D000004 ORTHO05D000563 8.1e-07 58.2 52 44.2
PSO063G7224 Papaver somniferum HOM05D000004 ORTHO05D000002 8.1e-07 58.2 55 40.0
PSO339G2721 Papaver somniferum HOM05D000004 ORTHO05D000002 8.1e-07 58.2 55 40.0
PSO761G0440 Papaver somniferum HOM05D000004 ORTHO05D000002 8.1e-07 58.2 55 41.8
SEGI_20123 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 8.1e-07 58.2 116 30.2
Eucgr.L00350 Eucalyptus grandis HOM05D000018 ORTHO05D000453 1.1e-06 57.8 52 40.4
FvH4_5g37993 Fragaria vesca HOM05D014227 ORTHO05D000563 1.1e-06 57.8 52 38.5
HanXRQChr07g0190251 Helianthus annuus HOM05D000004 ORTHO05D000002 1.1e-06 57.8 54 46.3
HanXRQChr10g0295121 Helianthus annuus HOM05D000004 ORTHO05D000002 1.1e-06 57.8 54 46.3
HanXRQChr13g0415051 Helianthus annuus HOM05D000004 ORTHO05D000002 1.1e-06 57.8 54 46.3
PSO170G1357 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-06 57.8 51 43.1
PSO675G6845 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-06 57.8 142 33.8
QL09p008939 Quercus lobata HOM05D000004 ORTHO05D000002 1.1e-06 57.8 138 31.2
FvH4_2g12101 Fragaria vesca HOM05D001125 ORTHO05D003189 1.4e-06 57.4 102 33.3
PSO017G5027 Papaver somniferum HOM05D000004 ORTHO05D000002 1.4e-06 57.4 142 33.1
PSO017G7238 Papaver somniferum HOM05D000004 ORTHO05D000002 1.4e-06 57.4 51 41.2
PSO675G1206 Papaver somniferum HOM05D000004 ORTHO05D000002 1.4e-06 57.4 142 33.1
SEGI_00045 Sequoiadendron giganteum HOM05D012154 ORTHO05D009660 1.4e-06 57.4 99 33.3
BolC2t07546H Brassica oleracea HOM05D000004 ORTHO05D000563 1.8e-06 57.0 51 45.1
MBI05_g36416_MAGBIO Magnolia biondii HOM05D012572 ORTHO05D011737 1.8e-06 57.0 56 42.9
PSO017G0752 Papaver somniferum HOM05D000004 ORTHO05D000002 1.8e-06 57.0 55 40.0
PSO781G0082 Papaver somniferum HOM05D000004 ORTHO05D000002 1.8e-06 57.0 55 40.0
SEGI_13733 Sequoiadendron giganteum HOM05D010421 ORTHO05D000029 1.8e-06 57.0 85 32.9
SEGI_31658 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 1.8e-06 57.0 110 31.8
PSO063G2046 Papaver somniferum HOM05D000004 ORTHO05D000002 2.4e-06 56.6 55 40.0
PSO478G0935 Papaver somniferum HOM05D000004 ORTHO05D000002 2.4e-06 56.6 142 33.1
PSO724G0202 Papaver somniferum HOM05D000004 ORTHO05D000002 2.4e-06 56.6 142 33.1
QL09p008068 Quercus lobata HOM05D000004 ORTHO05D009660 2.4e-06 56.6 53 43.4
SEGI_39693 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 2.4e-06 56.6 65 40.0
TPR.G27212 Trifolium pratense HOM05D035450 ORTHO05D010126 2.4e-06 56.6 54 38.9
Medtr4g102460 Medicago truncatula HOM05D000004 ORTHO05D000002 3.1e-06 56.2 117 28.2
PSO675G3106 Papaver somniferum HOM05D000004 ORTHO05D000002 3.1e-06 56.2 142 31.7
PSO732G0311 Papaver somniferum HOM05D000004 ORTHO05D000002 3.1e-06 56.2 55 40.0
QL11p024776 Quercus lobata HOM05D000004 ORTHO05D000002 3.1e-06 56.2 134 28.4
Rhsim04G0004700 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.1e-06 56.2 58 43.1
SEGI_20567 Sequoiadendron giganteum HOM05D013116 ORTHO05D012902 3.1e-06 56.2 102 33.3
PSO339G0871 Papaver somniferum HOM05D000004 ORTHO05D000002 4.0e-06 55.8 55 40.0
PGR142G2802 Punica granatum HOM05D000004 ORTHO05D000002 4.0e-06 55.8 52 38.5
TWI63G0248 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 4.0e-06 55.8 60 31.7
TWI77G0626 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 4.0e-06 55.8 51 39.2
Actinidia03258 Actinidia chinensis HOM05D057492 ORTHO05D000563 6.9e-06 55.1 53 37.7
ECA232G2072 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.9e-06 55.1 52 38.5
Thhalv10002967m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 6.9e-06 55.1 53 41.5
FvH4_3g40201 Fragaria vesca HOM05D000004 ORTHO05D000002 6.9e-06 55.1 99 31.3
FvH4_4g12742 Fragaria vesca HOM05D000004 ORTHO05D000002 6.9e-06 55.1 56 39.3
HanXRQChr16g0519861 Helianthus annuus HOM05D000004 ORTHO05D000002 6.9e-06 55.1 54 44.4
Hma1.2p1_1176F.1_g264230 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 6.9e-06 55.1 60 36.7
Hma1.2p1_1483F.1_g286280 Hydrangea macrophylla HOM05D000004 ORTHO05D011737 6.9e-06 55.1 154 29.9
PSO675G2557 Papaver somniferum HOM05D000004 ORTHO05D000002 6.9e-06 55.1 50 42.0
TWI09G0867 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.9e-06 55.1 53 37.7
Atru.chr9.1417 Acer truncatum HOM05D000004 ORTHO05D000563 9.0e-06 54.7 154 29.2
Thhalv10003071m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 9.0e-06 54.7 53 39.6
FvH4_2g17921 Fragaria vesca HOM05D008382 ORTHO05D009660 9.0e-06 54.7 99 31.3
PSO832G1458 Papaver somniferum HOM05D000004 ORTHO05D009660 9.0e-06 54.7 93 32.3
PGR102G1331 Punica granatum HOM05D000004 ORTHO05D000002 9.0e-06 54.7 86 33.7
PGR134G0003 Punica granatum HOM05D000004 ORTHO05D000002 9.0e-06 54.7 86 33.7
QL03p051256 Quercus lobata HOM05D000573 ORTHO05D030524 9.0e-06 54.7 50 40.0
SEGI_16377 Sequoiadendron giganteum HOM05D000236 ORTHO05D000192 9.0e-06 54.7 58 43.1
SEGI_31155 Sequoiadendron giganteum HOM05D000236 ORTHO05D000192 9.0e-06 54.7 58 43.1
SEGI_32819 Sequoiadendron giganteum HOM05D000236 ORTHO05D000192 9.0e-06 54.7 58 43.1


User provided reference genes

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