Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 2.4e-211 738.8 383 100.0
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 1.5e-133 480.3 316 75.9
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 1.4e-131 473.8 317 76.3
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 6.0e-130 468.4 316 75.0
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 1.0e-129 467.6 335 70.1
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 5.1e-129 465.3 321 72.9
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 6.6e-129 464.9 316 73.4
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 1.9e-128 463.4 340 68.8
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 2.5e-128 463.0 359 67.4
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 2.5e-128 463.0 345 69.9
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 2.5e-128 463.0 316 73.7
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 1.6e-127 460.3 313 74.4
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 2.1e-127 459.9 323 71.2
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 1.1e-126 457.6 388 65.2
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 1.1e-126 457.6 388 65.2
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 1.4e-126 457.2 364 65.7
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 4.0e-126 455.7 310 73.2
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 3.4e-125 452.6 358 65.4
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 4.4e-125 452.2 317 71.3
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 5.8e-125 451.8 319 72.4
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 7.5e-125 451.4 348 68.4
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 7.5e-125 451.4 332 70.8
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 1.3e-124 450.7 326 71.2
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 1.7e-124 450.3 352 67.6
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 3.7e-124 449.1 353 66.3
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 6.4e-124 448.4 347 67.7
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 6.4e-124 448.4 319 69.9
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 1.1e-123 447.6 357 67.5
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 1.1e-123 447.6 321 71.0
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 1.4e-123 447.2 320 72.5
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 2.4e-123 446.4 355 68.2
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 7.1e-123 444.9 314 71.0
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 9.2e-123 444.5 351 65.8
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 1.2e-122 444.1 360 65.3
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 2.1e-122 443.4 336 67.9
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 2.7e-122 443.0 332 69.6
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 2.7e-122 443.0 356 65.2
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 3.5e-122 442.6 356 66.3
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 4.6e-122 442.2 313 70.9
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 4.6e-122 442.2 357 64.4
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 1.7e-121 440.3 320 71.2
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 3.0e-121 439.5 316 69.9
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 3.9e-121 439.1 313 69.6
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 5.1e-121 438.7 331 68.0
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 6.6e-121 438.3 346 65.9
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 1.5e-120 437.2 318 69.2
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 1.9e-120 436.8 391 61.1
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 1.9e-120 436.8 313 70.3
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 2.5e-120 436.4 350 66.6
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 7.3e-120 434.9 349 65.9
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 9.5e-120 434.5 340 66.5
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 2.1e-119 433.3 344 66.3
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 2.8e-119 433.0 321 69.5
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 6.2e-119 431.8 342 63.7
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 1.8e-118 430.3 354 63.8
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 3.1e-118 429.5 313 69.6
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 2.6e-117 426.4 386 63.5
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 3.4e-117 426.0 316 68.0
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 4.4e-117 425.6 360 63.6
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 1.7e-116 423.7 350 63.4
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 1.7e-116 423.7 320 67.2
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 2.2e-116 423.3 312 69.9
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 2.2e-116 423.3 317 69.7
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 3.8e-116 422.5 321 65.7
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 4.9e-116 422.2 320 65.9
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 1.4e-115 420.6 321 65.7
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 1.4e-115 420.6 323 66.6
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 1.4e-115 420.6 318 66.4
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 1.9e-115 420.2 322 65.2
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 3.2e-115 419.5 318 67.3
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 3.2e-115 419.5 321 65.7
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 3.2e-115 419.5 309 66.0
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 5.4e-115 418.7 317 66.9
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 6.0e-114 415.2 325 67.7
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 6.0e-114 415.2 395 57.5
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 7.8e-114 414.8 321 65.4
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 7.8e-114 414.8 321 65.4
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 1.7e-113 413.7 321 65.4
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 2.3e-113 413.3 315 65.4
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 3.0e-113 412.9 321 65.1
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 8.7e-113 411.4 312 67.0
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 6.9e-110 401.7 315 63.8
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 7.6e-109 398.3 405 57.3
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.7e-108 397.1 417 58.8
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 2.9e-108 396.4 393 56.2
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 5.4e-107 392.1 321 62.6
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 7.8e-106 388.3 326 63.2
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 1.3e-103 380.9 326 59.5
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 1.3e-103 380.9 343 58.3
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 9.6e-96 354.8 561 41.5
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 6.2e-95 352.1 259 68.7
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 6.9e-94 348.6 267 66.3
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 5.5e-91 339.0 295 58.6
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 1.6e-87 327.4 276 62.7
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 1.7e-84 317.4 257 66.5
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 6.7e-81 305.4 252 64.7
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 3.3e-80 303.1 221 68.3
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 1.4e-65 254.6 312 48.1
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 1.8e-65 254.2 191 68.1
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 2.8e-63 246.9 184 70.1
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 2.6e-53 213.8 197 58.9
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 2.2e-47 194.1 154 61.0
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 3.0e-41 173.7 185 50.8
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 1.4e-38 164.9 331 34.7
Os06g0708900 Oryza sativa ssp. japonica HOM05D006577 ORTHO05D008428 5.9e-29 132.9 86 74.4
Zm00001eb395460 Zea mays HOM05D006577 ORTHO05D008428 1.9e-27 127.9 117 60.7
VMungo0251G3731 Vigna mungo HOM05D006577 ORTHO05D008428 3.3e-27 127.1 86 73.3
Zm00001eb339160 Zea mays HOM05D006577 ORTHO05D008428 7.3e-27 125.9 93 68.8
CARHR123800 Cardamine hirsuta HOM05D006577 ORTHO05D008428 7.5e-24 115.9 70 74.3
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 1.7e-23 114.8 193 39.9
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 5.0e-20 103.2 115 52.2
Nitab4.5_0000030g0480 Nicotiana tabacum HOM05D006577 ORTHO05D008428 1.2e-16 92.0 73 60.3
AUR62042461 Chenopodium quinoa HOM05D006577 ORTHO05D008428 3.4e-16 90.5 104 52.9
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 1.3e-15 88.6 64 73.4
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 6.4e-15 86.3 64 71.9
Lj3C28T3 Lonicera japonica HOM05D006577 ORTHO05D008428 1.4e-14 85.1 52 76.9
Cre06.g280700 Chlamydomonas reinhardtii HOM05D006577 ORTHO05D008428 4.1e-14 83.6 110 39.1
Lj3A8T28 Lonicera japonica HOM05D006577 ORTHO05D008428 7.1e-14 82.8 52 75.0
TPR.G13376 Trifolium pratense HOM05D006577 ORTHO05D008428 2.1e-13 81.3 67 62.7
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 2.5e-11 74.3 134 53.0
BcaB08g35318 Brassica carinata HOM05D006577 ORTHO05D008428 3.1e-09 67.4 58 55.2
FvH4_3g03932 Fragaria vesca HOM05D006577 ORTHO05D008428 5.2e-09 66.6 74 55.4


User provided reference genes

Program Settings