Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 1.2e-174 616.3 302 100.0
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 5.3e-109 398.3 268 71.3
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 3.5e-108 395.6 268 71.3
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 4.5e-108 395.2 268 70.5
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 8.5e-107 391.0 268 69.8
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 4.2e-106 388.7 268 69.0
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 1.2e-105 387.1 267 70.4
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 8.0e-105 384.4 268 70.9
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 1.0e-104 384.0 271 67.9
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 1.0e-104 384.0 271 69.7
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 1.4e-104 383.6 267 70.4
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 2.3e-104 382.9 268 70.9
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 2.3e-104 382.9 271 68.6
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 2.3e-104 382.9 271 68.6
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 3.0e-104 382.5 268 68.7
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 8.8e-104 380.9 268 68.7
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 1.1e-103 380.6 267 70.4
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 1.5e-103 380.2 268 68.7
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.5e-103 380.2 268 68.7
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.0e-103 379.8 268 70.5
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 2.6e-103 379.4 267 70.8
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 5.7e-103 378.3 267 68.9
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 1.3e-102 377.1 272 68.8
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 1.7e-102 376.7 280 67.9
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 2.2e-102 376.3 275 68.4
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 2.2e-102 376.3 268 67.5
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 2.2e-102 376.3 268 67.2
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 2.8e-102 375.9 268 68.7
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 2.8e-102 375.9 267 68.9
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 3.7e-102 375.6 269 69.9
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 3.7e-102 375.6 268 67.9
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 3.7e-102 375.6 267 69.3
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 1.1e-101 374.0 266 67.7
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 1.1e-101 374.0 268 68.3
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 1.8e-101 373.2 268 67.9
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 7.0e-101 371.3 249 72.7
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 9.1e-101 370.9 268 67.5
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 1.6e-100 370.2 266 68.0
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 1.6e-100 370.2 267 66.7
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 2.0e-100 369.8 268 67.5
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 2.0e-100 369.8 266 67.7
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 2.0e-100 369.8 269 67.7
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 2.0e-100 369.8 266 66.5
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 2.6e-100 369.4 268 66.8
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 2.6e-100 369.4 266 67.7
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 3.5e-100 369.0 267 68.5
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 7.7e-100 367.9 268 67.2
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 1.3e-99 367.1 268 66.0
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 1.7e-99 366.7 267 66.7
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 2.2e-99 366.3 267 67.8
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 2.9e-99 365.9 266 66.9
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 3.8e-99 365.5 266 66.9
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 6.5e-99 364.8 266 66.2
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 8.5e-99 364.4 268 66.4
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 1.9e-98 363.2 268 66.4
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 1.9e-98 363.2 270 65.6
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 4.2e-98 362.1 268 67.2
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 4.2e-98 362.1 268 66.0
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 4.2e-98 362.1 269 65.8
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.2e-97 360.5 266 65.8
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 1.2e-97 360.5 268 66.8
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 1.6e-97 360.1 268 66.8
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 3.6e-97 359.0 267 66.3
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 8.0e-97 357.8 266 65.0
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 2.3e-96 356.3 266 65.0
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 2.3e-96 356.3 310 59.4
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 3.0e-96 355.9 268 65.3
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 4.0e-96 355.5 290 62.1
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 6.8e-96 354.8 268 66.8
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 8.8e-96 354.4 266 66.2
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 8.8e-96 354.4 269 63.9
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 1.5e-95 353.6 269 65.4
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 3.4e-95 352.4 268 66.4
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 7.5e-95 351.3 327 58.1
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 1.3e-94 350.5 273 65.6
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 1.3e-94 350.5 303 59.4
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 1.7e-94 350.1 249 67.9
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 3.7e-94 349.0 249 68.7
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 1.1e-93 347.4 266 65.8
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 3.1e-93 345.9 266 65.4
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 1.2e-92 344.0 249 68.3
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 4.5e-92 342.0 231 72.7
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 1.3e-91 340.5 249 68.3
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 1.5e-90 337.0 275 62.9
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 7.2e-90 334.7 267 62.9
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 3.6e-89 332.4 231 70.1
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 1.8e-88 330.1 268 63.4
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 1.0e-80 304.3 219 67.6
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.9e-78 296.2 275 59.3
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 5.4e-77 292.0 253 62.8
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 2.0e-76 290.0 368 43.5
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.7e-75 287.0 258 60.1
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 5.0e-75 285.4 272 57.0
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.8e-72 276.9 206 67.0
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.1e-72 276.2 278 56.8
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 3.9e-59 232.6 158 69.6
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 3.3e-58 229.6 231 56.3
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.1e-53 214.5 158 71.5
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 1.4e-45 187.6 203 50.2
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 7.1e-45 185.3 139 66.9
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 6.0e-44 182.2 120 69.2
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 7.3e-42 175.3 127 67.7
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 4.2e-37 159.5 111 66.7
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 6.0e-36 155.6 107 65.4
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 6.6e-35 152.1 112 69.6
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 1.4e-32 144.4 110 63.6
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.2e-23 114.8 81 70.4
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.2e-23 114.8 81 70.4
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 1.5e-23 114.4 99 59.6
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 2.6e-23 113.6 85 68.2
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 2.5e-21 107.1 66 68.2
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 2.3e-19 100.5 66 65.2
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 6.9e-16 89.0 144 38.2
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 6.5e-14 82.4 87 55.2
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.6e-12 77.8 84 53.6
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.8e-08 64.3 91 42.9
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 3.1e-08 63.5 41 68.3
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 4.1e-08 63.2 63 52.4
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 2.2e-06 57.4 81 38.3


User provided reference genes

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