Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 1.1e-47 193.0 96 100.0
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 7.3e-20 100.5 90 56.7
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 7.3e-20 100.5 90 57.8
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 7.3e-20 100.5 90 56.7
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 9.5e-20 100.1 90 55.6
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 9.5e-20 100.1 90 56.7
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 1.2e-19 99.8 90 56.7
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 1.2e-19 99.8 90 54.4
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 1.2e-19 99.8 90 55.6
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 1.6e-19 99.4 90 52.2
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 2.1e-19 99.0 59 76.3
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 2.1e-19 99.0 59 74.6
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 2.8e-19 98.6 86 59.3
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 2.8e-19 98.6 88 58.0
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 3.6e-19 98.2 88 56.8
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 3.6e-19 98.2 90 53.3
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 3.6e-19 98.2 90 54.4
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 3.6e-19 98.2 90 55.6
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 3.6e-19 98.2 90 55.6
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 3.6e-19 98.2 88 59.1
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 3.6e-19 98.2 90 54.4
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 4.7e-19 97.8 61 73.8
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 4.7e-19 97.8 90 53.3
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 6.2e-19 97.4 90 54.4
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 6.2e-19 97.4 90 54.4
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 6.2e-19 97.4 90 54.4
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 6.2e-19 97.4 90 54.4
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 6.2e-19 97.4 90 54.4
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 6.2e-19 97.4 90 53.3
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 6.2e-19 97.4 87 56.3
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 6.2e-19 97.4 90 54.4
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 6.2e-19 97.4 90 54.4
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 6.2e-19 97.4 90 53.3
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 8.1e-19 97.1 90 53.3
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 8.1e-19 97.1 90 53.3
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 1.1e-18 96.7 88 56.8
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.1e-18 96.7 90 53.3
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.1e-18 96.7 90 53.3
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 1.1e-18 96.7 90 54.4
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 1.1e-18 96.7 90 52.2
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 1.4e-18 96.3 90 53.3
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 1.8e-18 95.9 90 52.2
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 1.8e-18 95.9 90 52.2
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 1.8e-18 95.9 90 52.2
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 1.8e-18 95.9 90 52.2
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 1.8e-18 95.9 88 56.8
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 1.8e-18 95.9 90 55.6
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 2.3e-18 95.5 88 55.7
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 2.3e-18 95.5 87 55.2
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 2.3e-18 95.5 88 55.7
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 2.3e-18 95.5 90 53.3
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 2.3e-18 95.5 87 56.3
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 2.3e-18 95.5 90 55.6
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 3.1e-18 95.1 87 56.3
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 3.1e-18 95.1 90 54.4
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 3.1e-18 95.1 90 53.3
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 3.1e-18 95.1 90 55.6
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 4.0e-18 94.7 90 53.3
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 5.2e-18 94.4 88 54.5
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 5.2e-18 94.4 90 53.3
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 6.8e-18 94.0 87 55.2
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 6.8e-18 94.0 90 54.4
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 6.8e-18 94.0 87 55.2
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 6.8e-18 94.0 88 54.5
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 6.8e-18 94.0 90 52.2
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 6.8e-18 94.0 88 54.5
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 8.9e-18 93.6 87 54.0
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 8.9e-18 93.6 87 52.9
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 8.9e-18 93.6 87 55.2
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 8.9e-18 93.6 87 55.2
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 8.9e-18 93.6 87 55.2
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 8.9e-18 93.6 88 54.5
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 8.9e-18 93.6 87 54.0
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 8.9e-18 93.6 90 53.3
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 1.2e-17 93.2 90 51.1
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 1.2e-17 93.2 87 55.2
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 1.5e-17 92.8 88 53.4
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 1.5e-17 92.8 88 52.3
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 2.6e-17 92.0 87 51.7
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 2.6e-17 92.0 87 51.7
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 3.4e-17 91.7 90 51.1
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 3.4e-17 91.7 88 51.1
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 4.4e-17 91.3 90 51.1
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 5.8e-17 90.9 90 53.3
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 5.8e-17 90.9 63 60.3
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 5.8e-17 90.9 88 52.3
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 9.9e-17 90.1 88 51.1
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 1.3e-16 89.7 88 51.1
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 1.7e-16 89.4 90 48.9
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 1.7e-16 89.4 90 48.9
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 8.3e-16 87.0 80 56.2
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 2.4e-15 85.5 61 63.9
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 1.2e-14 83.2 59 61.0
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 2.7e-14 82.0 88 47.7
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 3.5e-14 81.6 67 58.2
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 4.6e-14 81.3 50 74.0
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 7.8e-14 80.5 75 54.7
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 7.8e-14 80.5 74 55.4
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 1.0e-13 80.1 88 48.9
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 1.3e-13 79.7 90 44.4
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 2.3e-13 79.0 74 54.1
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 5.1e-13 77.8 73 53.4
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 6.6e-13 77.4 88 48.9
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 6.6e-13 77.4 84 50.0
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 6.6e-13 77.4 74 55.4
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 8.6e-13 77.0 76 52.6
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 1.1e-12 76.6 79 51.9
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 2.5e-12 75.5 90 48.9
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 2.4e-10 68.9 88 40.9
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.9e-07 59.3 74 43.2
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 2.7e-06 55.5 62 38.7


User provided reference genes

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