Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36456 Sequoiadendron giganteum HOM05D004435 ORTHO05D005103 9.2e-87 323.6 166 100.0
Nn1g00298 Nelumbo nucifera HOM05D004435 ORTHO05D005103 5.9e-17 91.7 120 36.7
CARHR141910 Cardamine hirsuta HOM05D004435 ORTHO05D005103 1.3e-16 90.5 115 39.1
Sp4g28610 Schrenkiella parvula HOM05D004435 ORTHO05D005103 6.5e-16 88.2 115 38.3
AL4G45990 Arabidopsis lyrata HOM05D004435 ORTHO05D005103 1.4e-15 87.0 116 36.2
BcaC02g12673 Brassica carinata HOM05D004435 ORTHO05D005103 3.2e-15 85.9 118 39.0
Thhalv10001279m.g Eutrema salsugineum HOM05D004435 ORTHO05D005103 3.2e-15 85.9 116 36.2
AT2G46560 Arabidopsis thaliana HOM05D004435 ORTHO05D005103 7.2e-15 84.7 116 36.2
BcaC02g12668 Brassica carinata HOM05D004435 ORTHO05D005103 7.2e-15 84.7 116 36.2
C04p01360 Brassica napus HOM05D004435 ORTHO05D005103 7.2e-15 84.7 116 36.2
BolC4t21789H Brassica oleracea HOM05D004435 ORTHO05D005103 7.2e-15 84.7 116 36.2
BraA05t19122Z Brassica rapa HOM05D004435 ORTHO05D005103 7.2e-15 84.7 116 36.2
TAR374G0897 Trochodendron aralioides HOM05D004435 ORTHO05D005103 7.2e-15 84.7 120 37.5
Sed0001978 Sechium edule HOM05D004435 ORTHO05D005103 1.2e-14 84.0 130 40.0
CSS0028718 Camellia sinensis var. sinensis HOM05D004435 ORTHO05D005103 1.6e-14 83.6 120 35.0
CsaV3_3G007940 Cucumis sativus L. HOM05D004435 ORTHO05D005103 2.1e-14 83.2 130 37.7
AUR62004511 Chenopodium quinoa HOM05D004435 ORTHO05D005103 3.6e-14 82.4 119 35.3
ClCG05G000720 Citrullus lanatus HOM05D004435 ORTHO05D005103 3.6e-14 82.4 130 40.0
A05p01210 Brassica napus HOM05D004435 ORTHO05D005103 4.6e-14 82.0 116 36.2
Pp3c3_34200 Physcomitrium patens HOM05D004435 ORTHO05D005103 4.6e-14 82.0 128 35.2
vmacro04283 Vaccinium macrocarpon HOM05D004435 ORTHO05D005103 4.6e-14 82.0 123 37.4
Dinv34221 Davidia involucrata HOM05D004435 ORTHO05D005103 7.9e-14 81.3 120 35.8
Rhsim07G0003000 Rhododendron simsii HOM05D004435 ORTHO05D005103 7.9e-14 81.3 133 34.6
CDE10G1324 Ceratophyllum demersum HOM05D004435 ORTHO05D005103 1.0e-13 80.9 132 36.4
Potri.002G173300 Populus trichocarpa HOM05D004435 ORTHO05D005103 1.0e-13 80.9 120 36.7
Cfa003785 Carpinus fangiana HOM05D004435 ORTHO05D005103 1.4e-13 80.5 126 38.1
COL.COLO4_06228 Corchorus olitorius HOM05D004435 ORTHO05D005103 1.4e-13 80.5 133 33.1
MELO3C006012.2 Cucumis melo HOM05D004435 ORTHO05D005103 1.8e-13 80.1 130 36.9
TWI14G0481 Tripterygium wilfordii HOM05D004435 ORTHO05D005103 1.8e-13 80.1 129 33.3
GSVIVG01027171001 Vitis vinifera HOM05D004435 ORTHO05D005103 1.8e-13 80.1 120 36.7
Gohir.A11G098100 Gossypium hirsutum HOM05D004435 ORTHO05D005103 3.0e-13 79.3 128 32.8
Haze_15676 Corylus avellana HOM05D004435 ORTHO05D005103 5.1e-13 78.6 126 36.5
Gohir.D11G102800 Gossypium hirsutum HOM05D004435 ORTHO05D005103 5.1e-13 78.6 120 33.3
Lsat_1_v5_gn_4_33701 Lactuca sativa HOM05D004435 ORTHO05D005103 5.1e-13 78.6 120 32.5
Duzib133G0905 Durio zibethinus HOM05D004435 ORTHO05D005103 6.7e-13 78.2 140 32.1
AagrBONN_evm.TU.Sc2ySwM_228.2860 Anthoceros agrestis HOM05D004435 ORTHO05D005103 8.8e-13 77.8 118 36.4
Gorai.007G109900 Gossypium raimondii HOM05D004435 ORTHO05D005103 1.1e-12 77.4 120 33.3
Ciclev10018429m.g Citrus clementina HOM05D004435 ORTHO05D005103 1.5e-12 77.0 119 33.6
Manes.01G244500 Manihot esculenta HOM05D004435 ORTHO05D005103 1.5e-12 77.0 138 29.7
Mapoly0001s0466 Marchantia polymorpha HOM05D004435 ORTHO05D005103 1.5e-12 77.0 122 36.1
Sabra02G0140000 Salix brachista HOM05D004435 ORTHO05D005103 2.0e-12 76.6 120 35.0
Atru.chr5.694 Acer truncatum HOM05D004435 ORTHO05D005103 3.3e-12 75.9 138 31.2
Aa31LG1G27960 Aethionema arabicum HOM05D004435 ORTHO05D005103 3.3e-12 75.9 116 31.9
EL10Ac1g00244 Beta vulgaris HOM05D004435 ORTHO05D005103 3.3e-12 75.9 120 32.5
Ah.05g179380 Amaranthus hybridus HOM05D004435 ORTHO05D005103 5.7e-12 75.1 123 33.3
DCAR_008669 Daucus carota HOM05D004435 ORTHO05D005103 7.4e-12 74.7 123 32.5
FvH4_7g16880 Fragaria vesca HOM05D004435 ORTHO05D005103 7.4e-12 74.7 123 33.3
FAN06G0620 Fragaria x ananassa HOM05D004435 ORTHO05D005103 7.4e-12 74.7 123 33.3
FAN06G2443 Fragaria x ananassa HOM05D004435 ORTHO05D005103 7.4e-12 74.7 123 33.3
FAN10G0386 Fragaria x ananassa HOM05D004435 ORTHO05D005103 7.4e-12 74.7 123 33.3
THA.LOC104802083 Tarenaya hassleriana HOM05D004435 ORTHO05D005103 7.4e-12 74.7 127 32.3
RcHm_v2.0_Chr1g0360111 Rosa chinensis HOM05D004435 ORTHO05D005103 9.7e-12 74.3 123 35.8
Nitab4.5_0007244g0030 Nicotiana tabacum HOM05D004435 ORTHO05D005103 1.3e-11 73.9 126 34.9
FAN10G3841 Fragaria x ananassa HOM05D004435 ORTHO05D005103 2.2e-11 73.2 123 32.5
Nitab4.5_0001763g0010 Nicotiana tabacum HOM05D004435 ORTHO05D005103 2.2e-11 73.2 126 34.9
TPR.G20227 Trifolium pratense HOM05D004435 ORTHO05D005103 2.2e-11 73.2 123 30.9
FAN03G2945 Fragaria x ananassa HOM05D004435 ORTHO05D005103 2.8e-11 72.8 123 32.5
HPP92_020188 Vanilla planifolia HOM05D004435 ORTHO05D005103 3.7e-11 72.4 118 33.1
CAN.G1415.18 Capsicum annuum HOM05D004435 ORTHO05D005103 4.8e-11 72.0 112 37.5
Ca_23520_v3 Cicer arietinum L. HOM05D004435 ORTHO05D005103 4.8e-11 72.0 123 30.1
MD01G1083800 Malus domestica HOM05D004435 ORTHO05D005103 6.3e-11 71.6 123 34.1
Peaxi162Scf00345g00125 Petunia axillaris HOM05D004435 ORTHO05D005103 6.3e-11 71.6 112 38.4
Solyc01g096110.3 Solanum lycopersicum HOM05D004435 ORTHO05D005103 6.3e-11 71.6 112 36.6
Sopen01g039830 Solanum pennellii HOM05D004435 ORTHO05D005103 6.3e-11 71.6 112 36.6
Cc02_g39580 Coffea canephora HOM05D004435 ORTHO05D005103 8.2e-11 71.2 132 34.1
Medtr8g027425 Medicago truncatula HOM05D004435 ORTHO05D005103 1.1e-10 70.9 121 31.4
MBI06_g44136_MAGBIO Magnolia biondii HOM05D004435 ORTHO05D005103 2.4e-10 69.7 120 31.7
Glyma.07G054500 Glycine max HOM05D004435 ORTHO05D005103 5.3e-10 68.6 127 30.7
Lj3g0005802 Lotus japonicus HOM05D004435 ORTHO05D005103 5.3e-10 68.6 127 30.7
Hund27186 Selenicereus undatus HOM05D004435 ORTHO05D005103 5.3e-10 68.6 120 34.2
arahy.Tifrunner.gnm1.ann1.VXNL4X Arachis hypogaea HOM05D004435 ORTHO05D005103 6.9e-10 68.2 120 31.7
Migut.B01890 Erythranthe guttata HOM05D004435 ORTHO05D005103 2.0e-09 66.6 120 32.5
arahy.Tifrunner.gnm1.ann1.Y0VUSY Arachis hypogaea HOM05D004435 ORTHO05D005103 2.6e-09 66.2 120 31.7
CANSAT56G0169 Cannabis sativa HOM05D004435 ORTHO05D005103 3.4e-09 65.9 119 32.8
Lalb_Chr10g0100641 Lupinus albus HOM05D004435 ORTHO05D005103 3.4e-09 65.9 120 31.7
Aqoxy1G03073 Aquilegia oxysepala HOM05D004435 ORTHO05D005103 4.5e-09 65.5 109 33.9
Glyma.16G023300 Glycine max HOM05D004435 ORTHO05D005103 5.9e-09 65.1 143 28.7
Psat4g214760 Pisum sativum HOM05D004435 ORTHO05D005103 1.0e-08 64.3 127 29.9
unitig_736.g22808 Utricularia gibba HOM05D004435 ORTHO05D005103 1.3e-08 63.9 119 33.6
QL08p045721 Quercus lobata HOM05D004435 ORTHO05D005103 2.2e-08 63.2 123 34.1
FAN10G3182 Fragaria x ananassa HOM05D004435 ORTHO05D005103 3.8e-08 62.4 119 30.3
VMungo0331G1532 Vigna mungo HOM05D004435 ORTHO05D005103 5.0e-08 62.0 143 28.0
FAN10G3206 Fragaria x ananassa HOM05D004435 ORTHO05D005103 8.5e-08 61.2 119 30.3
PGR044G1747 Punica granatum HOM05D004435 ORTHO05D005103 8.5e-08 61.2 141 29.8
CiPaw.01G077800 Carya illinoinensis HOM05D004435 ORTHO05D005103 1.9e-07 60.1 125 31.2
Zm00001eb356500 Zea mays HOM05D004435 ORTHO05D005103 2.5e-07 59.7 67 43.3
ATR0605G097 Amborella trichopoda HOM05D004435 ORTHO05D005103 5.5e-07 58.5 107 31.8
PSO135G0708 Papaver somniferum HOM05D004435 ORTHO05D005103 5.5e-07 58.5 117 32.5
PSO384G1989 Papaver somniferum HOM05D004435 ORTHO05D005103 9.4e-07 57.8 120 30.0
Hma1.2p1_0101F.1_g049260 Hydrangea macrophylla HOM05D004435 ORTHO05D005103 1.6e-06 57.0 106 31.1
Eucgr.E00041 Eucalyptus grandis HOM05D004435 ORTHO05D005103 3.6e-06 55.8 64 43.8
HanXRQChr17g0563351 Helianthus annuus HOM05D004435 ORTHO05D005103 6.1e-06 55.1 120 26.7


User provided reference genes

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