Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 3.5e-247 858.2 568 100.0
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 7.7e-93 345.5 209 72.2
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 9.4e-91 338.6 210 71.9
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 2.0e-88 330.9 216 70.4
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 2.6e-88 330.5 205 71.2
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 5.7e-88 329.3 205 72.7
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 2.2e-87 327.4 205 71.2
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 4.8e-87 326.2 207 68.1
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 1.8e-86 324.3 204 71.1
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 1.8e-86 324.3 205 72.2
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 2.0e-85 320.9 243 63.4
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 1.7e-84 317.8 210 66.7
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 2.2e-84 317.4 205 70.2
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 5.0e-84 316.2 205 69.3
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 2.5e-83 313.9 214 65.4
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 7.2e-83 312.4 205 69.3
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 3.6e-82 310.1 205 66.8
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 6.1e-82 309.3 224 62.9
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 1.4e-81 308.1 237 61.2
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 2.0e-80 304.3 197 70.1
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 3.4e-80 303.5 205 65.4
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 7.5e-80 302.4 206 67.0
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 1.8e-78 297.7 209 63.6
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 3.1e-78 297.0 217 63.6
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 9.1e-78 295.4 225 60.4
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 1.2e-77 295.0 210 62.9
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 5.9e-77 292.7 219 63.0
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 7.7e-77 292.4 206 63.6
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 1.3e-76 291.6 212 62.7
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 2.3e-76 290.8 199 64.3
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 1.1e-75 288.5 211 60.7
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 7.2e-75 285.8 215 63.3
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 6.1e-74 282.7 206 60.2
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 8.0e-74 282.3 211 63.0
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 1.8e-73 281.2 205 62.0
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 3.0e-73 280.4 218 59.2
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 5.7e-72 276.2 201 62.2
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 7.5e-72 275.8 170 71.8
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 3.7e-71 273.5 234 57.7
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 2.7e-69 267.3 203 59.1
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 4.5e-69 266.5 220 55.9
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 7.8e-69 265.8 249 55.0
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 1.2e-66 258.5 203 58.6
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 1.2e-66 258.5 205 59.0
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 1.1e-62 245.4 211 54.5
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 2.3e-60 237.7 163 62.0
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 1.9e-59 234.6 205 54.1
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 1.1e-57 228.8 158 63.9
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 4.0e-57 226.9 224 50.0
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 6.8e-57 226.1 240 47.1
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 2.9e-55 220.7 123 78.0
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 3.7e-55 220.3 115 80.0
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 9.5e-51 205.7 201 48.8
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 8.1e-50 202.6 123 67.5
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 1.4e-49 201.8 209 48.8
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 7.6e-48 196.1 140 63.6
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 3.7e-47 193.7 106 75.5
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 6.4e-47 193.0 162 55.6
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 1.2e-45 188.7 143 60.1
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 1.2e-45 188.7 125 68.0
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 2.7e-45 187.6 122 68.0
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 6.0e-45 186.4 124 64.5
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 1.1e-43 182.2 132 59.1
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 1.5e-43 181.8 104 76.0
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 5.6e-43 179.9 121 63.6
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 7.3e-43 179.5 116 69.0
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 6.2e-42 176.4 198 43.9
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 8.9e-41 172.6 192 42.2
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 1.6e-37 161.8 122 60.7
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 1.1e-35 155.6 97 70.1
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 1.5e-35 155.2 86 77.9
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 4.3e-35 153.7 200 39.5
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 4.0e-33 147.1 97 67.0
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 5.8e-32 143.3 186 38.2
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 5.8e-32 143.3 119 52.9
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 4.9e-31 140.2 108 59.3
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 2.1e-29 134.8 193 37.3
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 1.3e-28 132.1 197 37.1
MD13G1227700 Malus domestica HOM05D007543 ORTHO05D009555 3.9e-28 130.6 98 61.2
AagrBONN_evm.TU.Sc2ySwM_344.5003 Anthoceros agrestis HOM05D007543 ORTHO05D009555 2.0e-24 118.2 99 57.6
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 2.6e-24 117.9 73 67.1
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 3.2e-22 110.9 198 33.3
Dinv29774 Davidia involucrata HOM05D007543 ORTHO05D009555 3.5e-21 107.5 76 64.5
Cre10.g418851 Chlamydomonas reinhardtii HOM05D007543 ORTHO05D009555 3.2e-14 84.3 212 29.2
Cc03_g07020 Coffea canephora HOM05D007543 ORTHO05D009555 3.3e-11 74.3 63 57.1
Ciclev10006635m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.4e-09 68.9 127 34.6
Solyc09g091150.2 Solanum lycopersicum HOM05D007543 ORTHO05D009555 1.2e-08 65.9 51 58.8
Cpa.g.sc59.61 Carica papaya HOM05D007543 ORTHO05D009555 2.6e-08 64.7 140 35.7
Sopen09g034130 Solanum pennellii HOM05D007543 ORTHO05D009555 2.6e-08 64.7 51 58.8
MBI10_g16797_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 3.4e-08 64.3 50 60.0
SalBow2G0410 Salvia bowleyana HOM05D007543 ORTHO05D009555 4.5e-08 63.9 48 60.4
Oeu024843.1 Olea europaea HOM05D007543 ORTHO05D009555 1.0e-07 62.8 59 47.5
Lj6C641T2 Lonicera japonica HOM05D007543 ORTHO05D009555 1.7e-07 62.0 46 67.4
Migut.G00601 Erythranthe guttata HOM05D007543 ORTHO05D009555 1.4e-06 58.9 51 54.9
unitig_0.g2249 Utricularia gibba HOM05D007543 ORTHO05D009555 3.2e-06 57.8 72 44.4


User provided reference genes

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