Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36427 Sequoiadendron giganteum HOM05D001607 ORTHO05D001893 1.2e-83 313.2 164 100.0
Ca_27533_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 4.1e-31 138.7 143 52.4
Nn1g01507 Nelumbo nucifera HOM05D001607 ORTHO05D001893 1.6e-30 136.7 143 53.8
TPR.G8164 Trifolium pratense HOM05D001607 ORTHO05D001893 1.6e-30 136.7 143 54.5
GSVIVG01028929001 Vitis vinifera HOM05D001607 ORTHO05D001893 2.1e-30 136.3 144 52.8
Gohir.D08G110708 Gossypium hirsutum HOM05D001607 ORTHO05D001893 3.5e-30 135.6 147 52.4
Gorai.004G118400 Gossypium raimondii HOM05D001607 ORTHO05D001893 3.5e-30 135.6 147 52.4
Gohir.A08G099300 Gossypium hirsutum HOM05D001607 ORTHO05D001893 6.0e-30 134.8 147 51.7
Cfa022712 Carpinus fangiana HOM05D001607 ORTHO05D001893 1.0e-29 134.0 145 53.1
Medtr0025s0060 Medicago truncatula HOM05D001607 ORTHO05D001893 1.3e-29 133.7 143 51.7
Ciclev10004167m.g Citrus clementina HOM05D001607 ORTHO05D001893 2.3e-29 132.9 148 50.7
Lj2g0000053 Lotus japonicus HOM05D001607 ORTHO05D001893 2.3e-29 132.9 152 50.0
Lj5g0010480 Lotus japonicus HOM05D001607 ORTHO05D001893 2.3e-29 132.9 143 51.7
Thecc.03G178600 Theobroma cacao HOM05D001607 ORTHO05D001893 3.0e-29 132.5 148 49.3
Glyma.09G137200 Glycine max HOM05D001607 ORTHO05D001893 3.9e-29 132.1 142 48.6
Lalb_Chr19g0130771 Lupinus albus HOM05D001607 ORTHO05D001893 6.6e-29 131.3 152 48.0
Manes.06G148500 Manihot esculenta HOM05D001607 ORTHO05D001893 8.6e-29 131.0 143 51.7
COL.COLO4_14332 Corchorus olitorius HOM05D001607 ORTHO05D001893 1.1e-28 130.6 148 48.6
Glyma.16G182500 Glycine max HOM05D001607 ORTHO05D001893 1.5e-28 130.2 143 46.9
TAR375G0166 Trochodendron aralioides HOM05D001607 ORTHO05D001893 1.5e-28 130.2 141 55.3
Glyma.10G234500 Glycine max HOM05D001607 ORTHO05D001893 2.5e-28 129.4 147 50.3
Medtr1g101030 Medicago truncatula HOM05D001607 ORTHO05D001893 2.5e-28 129.4 143 50.3
Cpa.g.sc107.64 Carica papaya HOM05D001607 ORTHO05D001893 4.3e-28 128.6 148 48.6
Duzib068G0651 Durio zibethinus HOM05D001607 ORTHO05D001893 7.3e-28 127.9 140 51.4
ClCG01G004440 Citrullus lanatus HOM05D001607 ORTHO05D001893 9.5e-28 127.5 150 52.0
VMungo0464G1130 Vigna mungo HOM05D001607 ORTHO05D001893 9.5e-28 127.5 143 49.7
Atru.chr1.433 Acer truncatum HOM05D001607 ORTHO05D001893 2.1e-27 126.3 149 47.7
Actinidia25880 Actinidia chinensis HOM05D001607 ORTHO05D001893 2.1e-27 126.3 143 49.7
arahy.Tifrunner.gnm1.ann1.M3PRP5 Arachis hypogaea HOM05D001607 ORTHO05D001893 2.1e-27 126.3 148 48.6
TPR.G26981 Trifolium pratense HOM05D001607 ORTHO05D001893 2.1e-27 126.3 143 50.3
Peaxi162Scf00444g00722 Petunia axillaris HOM05D001607 ORTHO05D001893 2.8e-27 125.9 143 48.3
FAN01G0648 Fragaria x ananassa HOM05D001607 ORTHO05D001893 3.6e-27 125.6 144 49.3
FAN03G1039 Fragaria x ananassa HOM05D001607 ORTHO05D001893 3.6e-27 125.6 144 49.3
FAN03G1056 Fragaria x ananassa HOM05D001607 ORTHO05D001893 3.6e-27 125.6 144 49.3
MD01G1203100 Malus domestica HOM05D001607 ORTHO05D001893 3.6e-27 125.6 143 48.3
FvH4_7g29630 Fragaria vesca HOM05D001607 ORTHO05D001893 4.7e-27 125.2 144 49.3
FAN06G1924 Fragaria x ananassa HOM05D001607 ORTHO05D001893 4.7e-27 125.2 144 49.3
FAN06G4239 Fragaria x ananassa HOM05D001607 ORTHO05D001893 4.7e-27 125.2 144 49.3
Actinidia34121 Actinidia chinensis HOM05D001607 ORTHO05D001893 6.2e-27 124.8 151 46.4
arahy.Tifrunner.gnm1.ann1.2YSW8E Arachis hypogaea HOM05D001607 ORTHO05D001893 6.2e-27 124.8 148 48.0
arahy.Tifrunner.gnm1.ann1.HZL4S5 Arachis hypogaea HOM05D001607 ORTHO05D001893 6.2e-27 124.8 148 48.0
MD07G1272600 Malus domestica HOM05D001607 ORTHO05D001893 6.2e-27 124.8 154 45.5
Phvul.004G114200 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 6.2e-27 124.8 148 47.3
Psat0s3405g0080 Pisum sativum HOM05D001607 ORTHO05D001893 6.2e-27 124.8 143 48.3
Ah.07g207010 Amaranthus hybridus HOM05D001607 ORTHO05D001893 8.1e-27 124.4 144 49.3
AUR62021171 Chenopodium quinoa HOM05D001607 ORTHO05D001893 8.1e-27 124.4 145 51.0
MELO3C005470.2 Cucumis melo HOM05D001607 ORTHO05D001893 8.1e-27 124.4 157 47.8
FAN10G2541 Fragaria x ananassa HOM05D001607 ORTHO05D001893 8.1e-27 124.4 144 49.3
Sabra12G0106800 Salix brachista HOM05D001607 ORTHO05D001893 8.1e-27 124.4 143 49.7
TWI39G1280 Tripterygium wilfordii HOM05D001607 ORTHO05D001893 8.1e-27 124.4 144 45.1
FAN10G1529 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.1e-26 124.0 144 49.3
Prupe.2G295900 Prunus persica HOM05D001607 ORTHO05D001893 1.1e-26 124.0 142 47.2
Nitab4.5_0001842g0120 Nicotiana tabacum HOM05D001607 ORTHO05D001893 1.4e-26 123.6 143 49.0
RcHm_v2.0_Chr1g0377641 Rosa chinensis HOM05D001607 ORTHO05D001893 1.4e-26 123.6 144 48.6
EL10Ac3g05618 Beta vulgaris HOM05D001607 ORTHO05D001893 1.8e-26 123.2 144 49.3
CSS0006931 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 1.8e-26 123.2 144 50.0
CAN.G307.23 Capsicum annuum HOM05D001607 ORTHO05D001893 1.8e-26 123.2 143 46.9
MSTRG.27107 Avicennia marina HOM05D001607 ORTHO05D001893 2.3e-26 122.9 153 47.1
CiPaw.04G071800 Carya illinoinensis HOM05D001607 ORTHO05D001893 2.3e-26 122.9 144 50.0
CsaV3_5G004660 Cucumis sativus L. HOM05D001607 ORTHO05D001893 2.3e-26 122.9 150 48.7
Nitab4.5_0005845g0040 Nicotiana tabacum HOM05D001607 ORTHO05D001893 3.1e-26 122.5 140 48.6
AUR62015965 Chenopodium quinoa HOM05D001607 ORTHO05D001893 4.0e-26 122.1 144 49.3
MBI18_g25519_MAGBIO Magnolia biondii HOM05D001607 ORTHO05D001893 4.0e-26 122.1 144 50.7
Psat6g198240 Pisum sativum HOM05D001607 ORTHO05D001893 4.0e-26 122.1 143 48.3
Migut.F00330 Erythranthe guttata HOM05D001607 ORTHO05D001893 5.2e-26 121.7 144 47.9
Potri.012G142200 Populus trichocarpa HOM05D001607 ORTHO05D001893 5.2e-26 121.7 143 47.6
Lalb_Chr02g0141081 Lupinus albus HOM05D001607 ORTHO05D001893 6.8e-26 121.3 146 47.3
Rhsim03G0187200 Rhododendron simsii HOM05D001607 ORTHO05D001893 6.8e-26 121.3 144 47.9
SalBow4G1573 Salvia bowleyana HOM05D001607 ORTHO05D001893 6.8e-26 121.3 147 49.7
Sed0028131 Sechium edule HOM05D001607 ORTHO05D001893 6.8e-26 121.3 150 48.7
Gorai.007G011200 Gossypium raimondii HOM05D001607 ORTHO05D001893 8.9e-26 120.9 148 50.0
Gohir.D11G009700 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.2e-25 120.6 148 50.0
Sc25g0000580 Simmondsia chinensis HOM05D001607 ORTHO05D001893 1.5e-25 120.2 149 47.0
DCAR_001509 Daucus carota HOM05D001607 ORTHO05D001893 2.6e-25 119.4 146 47.3
Eucgr.A02778 Eucalyptus grandis HOM05D001607 ORTHO05D001893 2.6e-25 119.4 145 49.0
Potri.015G145300 Populus trichocarpa HOM05D001607 ORTHO05D001893 2.6e-25 119.4 142 46.5
Gohir.A11G010500 Gossypium hirsutum HOM05D001607 ORTHO05D001893 3.4e-25 119.0 140 51.4
ATR0680G301 Amborella trichopoda HOM05D001607 ORTHO05D001893 4.4e-25 118.6 145 49.0
VMungo0720G1584 Vigna mungo HOM05D001607 ORTHO05D001893 4.4e-25 118.6 145 49.7
BcaNung05068 Brassica carinata HOM05D001607 ORTHO05D001893 7.5e-25 117.9 151 44.4
C07p50960 Brassica napus HOM05D001607 ORTHO05D001893 7.5e-25 117.9 151 44.4
A03p52520 Brassica napus HOM05D001607 ORTHO05D001893 9.9e-25 117.5 151 45.7
BolC7t45597H Brassica oleracea HOM05D001607 ORTHO05D001893 9.9e-25 117.5 148 44.6
Duzib205G1855 Durio zibethinus HOM05D001607 ORTHO05D001893 9.9e-25 117.5 150 46.7
Aqoxy1G00239 Aquilegia oxysepala HOM05D001607 ORTHO05D001893 1.3e-24 117.1 144 45.8
CANSAT21G1423 Cannabis sativa HOM05D001607 ORTHO05D001893 1.3e-24 117.1 155 46.5
Phvul.007G071600 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 2.2e-24 116.3 147 46.9
Lsat_1_v5_gn_8_8420 Lactuca sativa HOM05D001607 ORTHO05D001893 2.9e-24 115.9 144 47.9
Lj1A999G29 Lonicera japonica HOM05D001607 ORTHO05D001893 2.9e-24 115.9 139 48.9
Ca_10751_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 3.7e-24 115.5 143 47.6
Sp7g18940 Schrenkiella parvula HOM05D001607 ORTHO05D001893 3.7e-24 115.5 148 46.6
THA.LOC104824854 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 4.9e-24 115.2 143 44.8
AL7G33300 Arabidopsis lyrata HOM05D001607 ORTHO05D001893 8.3e-24 114.4 148 44.6
Os02g0664300 Oryza sativa ssp. japonica HOM05D001607 ORTHO05D001893 1.1e-23 114.0 143 46.9
THA.LOC104824860 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 1.1e-23 114.0 147 43.5
A01p12270 Brassica napus HOM05D001607 ORTHO05D001893 1.4e-23 113.6 148 46.6
BraA01t01171Z Brassica rapa HOM05D001607 ORTHO05D001893 1.4e-23 113.6 148 46.6
AT4G20850 Arabidopsis thaliana HOM05D001607 ORTHO05D001893 1.9e-23 113.2 148 43.9
ECA233G5223 Erigeron canadensis HOM05D001607 ORTHO05D001893 3.2e-23 112.5 145 46.2
PGR042G0514 Punica granatum HOM05D001607 ORTHO05D001893 3.2e-23 112.5 149 47.0
Carub.0007s2059 Capsella rubella HOM05D001607 ORTHO05D001893 4.1e-23 112.1 148 42.6
BraA03t14327Z Brassica rapa HOM05D001607 ORTHO05D001893 5.4e-23 111.7 149 45.0
THA.LOC104812206 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 5.4e-23 111.7 143 43.4
BcaNung04147 Brassica carinata HOM05D001607 ORTHO05D001893 7.1e-23 111.3 148 43.9
Thhalv10024222m.g Eutrema salsugineum HOM05D001607 ORTHO05D001893 7.1e-23 111.3 148 43.9
Sopen03g004450 Solanum pennellii HOM05D001607 ORTHO05D001893 7.1e-23 111.3 143 45.5
SGA_v2.0_scaffold60G21061 Striga asiatica HOM05D001607 ORTHO05D001893 1.2e-22 110.5 143 46.2
BcaC09g51300 Brassica carinata HOM05D001607 ORTHO05D001893 1.6e-22 110.2 149 45.0
PSO478G2555 Papaver somniferum HOM05D001607 ORTHO05D001893 2.7e-22 109.4 144 47.2
PSO782G3230 Papaver somniferum HOM05D001607 ORTHO05D001893 2.7e-22 109.4 147 46.3
C01p14680 Brassica napus HOM05D001607 ORTHO05D001893 3.5e-22 109.0 149 45.0
BolC1t01419H Brassica oleracea HOM05D001607 ORTHO05D001893 3.5e-22 109.0 149 45.0
CARHR227400 Cardamine hirsuta HOM05D001607 ORTHO05D001893 3.5e-22 109.0 143 44.1
SGA_v2.0_scaffold44G16733 Striga asiatica HOM05D001607 ORTHO05D001893 3.5e-22 109.0 144 47.9
Zm00001eb249900 Zea mays HOM05D001607 ORTHO05D001893 4.6e-22 108.6 149 43.6
HanXRQChr10g0304171 Helianthus annuus HOM05D001607 ORTHO05D001893 6.0e-22 108.2 143 46.2
CDE08G1124 Ceratophyllum demersum HOM05D001607 ORTHO05D001893 1.0e-21 107.5 139 45.3
HPP92_011359 Vanilla planifolia HOM05D001607 ORTHO05D001893 1.3e-21 107.1 144 45.1
arahy.Tifrunner.gnm1.ann1.CMMP9X Arachis hypogaea HOM05D001607 ORTHO05D001893 3.3e-20 102.4 144 41.7
Mapoly0069s0029 Marchantia polymorpha HOM05D001607 ORTHO05D001893 9.5e-20 100.9 167 41.3
arahy.Tifrunner.gnm1.ann1.GK85WT Arachis hypogaea HOM05D001607 ORTHO05D001893 1.6e-19 100.1 144 41.0
Pp3c2_32420 Physcomitrium patens HOM05D001607 ORTHO05D001893 3.6e-19 99.0 150 44.0
HPP92_011358 Vanilla planifolia HOM05D001607 ORTHO05D001893 2.0e-17 93.2 143 39.9
Pp3c7_23000 Physcomitrium patens HOM05D001607 ORTHO05D001893 5.8e-17 91.7 166 38.0
AagrBONN_evm.TU.Sc2ySwM_344.3434 Anthoceros agrestis HOM05D001607 ORTHO05D001893 4.2e-15 85.5 194 35.6
Eucgr.A02780 Eucalyptus grandis HOM05D001607 ORTHO05D001893 1.6e-14 83.6 143 37.8
Hund04843 Selenicereus undatus HOM05D001607 ORTHO05D001893 1.6e-14 83.6 102 48.0
MD07G1272200 Malus domestica HOM05D001607 ORTHO05D001893 1.0e-13 80.9 68 55.9
Hund04758 Selenicereus undatus HOM05D001607 ORTHO05D001893 8.7e-13 77.8 71 57.7
SMO367G0172 Selaginella moellendorffii HOM05D001607 ORTHO05D001893 1.1e-12 77.4 139 38.1
Haze_13673 Corylus avellana HOM05D001607 ORTHO05D001893 5.6e-12 75.1 208 31.2
Solyc03g025630.3 Solanum lycopersicum HOM05D001607 ORTHO05D001893 9.6e-12 74.3 101 43.6
unitig_46.g18793 Utricularia gibba HOM05D001607 ORTHO05D001893 9.6e-12 74.3 101 43.6
Sopen03g004440 Solanum pennellii HOM05D001607 ORTHO05D001893 4.0e-10 68.9 77 49.4
arahy.Tifrunner.gnm1.ann1.7UXB07 Arachis hypogaea HOM05D001607 ORTHO05D001893 2.2e-08 63.2 57 52.6
vmacro06666 Vaccinium macrocarpon HOM05D001607 ORTHO05D001893 2.9e-08 62.8 103 36.9
BcaNung05685 Brassica carinata HOM05D001607 ORTHO05D001893 1.1e-07 60.8 139 32.4
Aa31LG6G2920 Aethionema arabicum HOM05D001607 ORTHO05D001893 1.9e-07 60.1 147 29.9
QL09p013882 Quercus lobata HOM05D001607 ORTHO05D001893 1.6e-06 57.0 39 61.5
arahy.Tifrunner.gnm1.ann1.B9FIPF Arachis hypogaea HOM05D001607 ORTHO05D001893 4.6e-06 55.5 58 51.7


User provided reference genes

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