Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36274 Sequoiadendron giganteum HOM05D003105 ORTHO05D003471 7.9e-113 410.6 230 100.0
VMungo1383G2417 Vigna mungo HOM05D003105 ORTHO05D003471 4.8e-17 92.4 217 35.0
Glyma.08G360800 Glycine max HOM05D003105 ORTHO05D003471 2.0e-15 87.0 178 36.0
Prupe.1G221100 Prunus persica HOM05D003105 ORTHO05D003471 1.4e-13 80.9 205 34.6
MD16G1124400 Malus domestica HOM05D003105 ORTHO05D003471 1.9e-13 80.5 194 34.0
TAR629G1599 Trochodendron aralioides HOM05D003105 ORTHO05D003471 1.9e-13 80.5 198 35.9
Glyma.18G300800 Glycine max HOM05D003105 ORTHO05D003471 3.2e-13 79.7 205 32.7
COL.COLO4_13697 Corchorus olitorius HOM05D003105 ORTHO05D003471 4.2e-13 79.3 213 32.4
Manes.12G007100 Manihot esculenta HOM05D003105 ORTHO05D003471 1.6e-12 77.4 181 34.3
Dinv03746 Davidia involucrata HOM05D003105 ORTHO05D003471 2.1e-12 77.0 207 34.3
CiPaw.05G105500 Carya illinoinensis HOM05D003105 ORTHO05D003471 6.0e-12 75.5 209 33.5
FvH4_4g23200 Fragaria vesca HOM05D003105 ORTHO05D003471 6.0e-12 75.5 196 32.1
FAN12G4071 Fragaria x ananassa HOM05D003105 ORTHO05D003471 6.0e-12 75.5 196 32.1
THA.LOC104807398 Tarenaya hassleriana HOM05D003105 ORTHO05D003471 6.0e-12 75.5 189 33.3
MD13G1123800 Malus domestica HOM05D003105 ORTHO05D003471 7.9e-12 75.1 208 33.2
AUR62028883 Chenopodium quinoa HOM05D003105 ORTHO05D003471 1.3e-11 74.3 162 35.2
Ciclev10032019m.g Citrus clementina HOM05D003105 ORTHO05D003471 1.3e-11 74.3 210 31.9
Cc11_g17340 Coffea canephora HOM05D003105 ORTHO05D003471 1.3e-11 74.3 207 32.9
PGR119G1430 Punica granatum HOM05D003105 ORTHO05D003471 1.3e-11 74.3 184 35.3
Duzib251G0616 Durio zibethinus HOM05D003105 ORTHO05D003471 2.3e-11 73.6 191 30.9
QL03p051089 Quercus lobata HOM05D003105 ORTHO05D003471 2.3e-11 73.6 179 35.2
TWI18G0471 Tripterygium wilfordii HOM05D003105 ORTHO05D003471 2.3e-11 73.6 202 32.2
Eucgr.H04602 Eucalyptus grandis HOM05D003105 ORTHO05D003471 3.0e-11 73.2 178 34.3
Phvul.008G001600 Phaseolus vulgaris HOM05D003105 ORTHO05D003471 3.0e-11 73.2 212 31.1
Potri.001G060500 Populus trichocarpa HOM05D003105 ORTHO05D003471 3.0e-11 73.2 217 32.7
AUR62005672 Chenopodium quinoa HOM05D003105 ORTHO05D003471 3.9e-11 72.8 183 33.9
Hund25487 Selenicereus undatus HOM05D003105 ORTHO05D003471 3.9e-11 72.8 209 32.1
RcHm_v2.0_Chr4g0429561 Rosa chinensis HOM05D003105 ORTHO05D003471 5.1e-11 72.4 194 32.0
Sabra01G0043400 Salix brachista HOM05D003105 ORTHO05D003471 5.1e-11 72.4 200 33.0
Duzib147G0512 Durio zibethinus HOM05D003105 ORTHO05D003471 6.7e-11 72.0 152 31.6
Thecc.02G199400 Theobroma cacao HOM05D003105 ORTHO05D003471 6.7e-11 72.0 205 38.5
FAN17G2382 Fragaria x ananassa HOM05D003105 ORTHO05D003471 8.7e-11 71.6 198 31.3
Thecc.04G041300 Theobroma cacao HOM05D003105 ORTHO05D003471 8.7e-11 71.6 151 34.4
Gorai.012G084100 Gossypium raimondii HOM05D003105 ORTHO05D003471 1.1e-10 71.2 156 32.7
SEGI_00399 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 1.1e-10 71.2 120 38.3
SEGI_30342 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 1.1e-10 71.2 194 30.9
PSO017G5017 Papaver somniferum HOM05D003105 ORTHO05D003471 1.5e-10 70.9 208 32.2
Aa31LG3G14540 Aethionema arabicum HOM05D003105 ORTHO05D003471 3.3e-10 69.7 225 28.9
MELO3C014907.2 Cucumis melo HOM05D003105 ORTHO05D003471 3.3e-10 69.7 162 33.3
Atru.chr11.2383 Acer truncatum HOM05D003105 ORTHO05D003471 4.3e-10 69.3 203 30.0
CsaV3_3G026830 Cucumis sativus L. HOM05D003105 ORTHO05D003471 4.3e-10 69.3 158 34.2
SEGI_39801 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 4.3e-10 69.3 168 32.7
Sed0012834 Sechium edule HOM05D003105 ORTHO05D003471 5.6e-10 68.9 161 32.9
COL.COLO4_13299 Corchorus olitorius HOM05D003105 ORTHO05D003471 7.4e-10 68.6 154 31.8
Duzib264G1204 Durio zibethinus HOM05D003105 ORTHO05D003471 9.6e-10 68.2 154 33.1
ECA234G0704 Erigeron canadensis HOM05D003105 ORTHO05D003471 1.6e-09 67.4 174 33.3
Actinidia30614 Actinidia chinensis HOM05D003105 ORTHO05D003471 2.1e-09 67.0 198 31.8
Lj1g0015821 Lotus japonicus HOM05D003105 ORTHO05D003471 2.8e-09 66.6 162 32.7
Psat3g169000 Pisum sativum HOM05D003105 ORTHO05D003471 3.7e-09 66.2 162 33.3
arahy.Tifrunner.gnm1.ann1.JWHM9L Arachis hypogaea HOM05D003328 ORTHO05D003722 4.8e-09 65.9 182 28.6
Sabra03G0122500 Salix brachista HOM05D003105 ORTHO05D003471 4.8e-09 65.9 202 32.2
vmacro01039 Vaccinium macrocarpon HOM05D003105 ORTHO05D003471 4.8e-09 65.9 184 29.3
ClCG05G013790 Citrullus lanatus HOM05D003105 ORTHO05D003471 6.2e-09 65.5 161 31.7
Medtr7g027020 Medicago truncatula HOM05D003105 ORTHO05D003471 6.2e-09 65.5 143 32.9
Rhsim12G0022800 Rhododendron simsii HOM05D003105 ORTHO05D003471 6.2e-09 65.5 188 30.9
CsaV3_6G007960 Cucumis sativus L. HOM05D003105 ORTHO05D003471 8.1e-09 65.1 206 32.0
PSO478G1654 Papaver somniferum HOM05D003105 ORTHO05D003471 8.1e-09 65.1 201 32.8
Cpa.g.sc19.168 Carica papaya HOM05D003105 ORTHO05D003471 1.1e-08 64.7 155 29.7
ClCG06G001910 Citrullus lanatus HOM05D003105 ORTHO05D003471 1.1e-08 64.7 206 32.0
Manes.13G007300 Manihot esculenta HOM05D003105 ORTHO05D003471 1.1e-08 64.7 135 31.9
PGR004G1231 Punica granatum HOM05D003328 ORTHO05D003722 1.1e-08 64.7 184 34.2
Aqoxy5G03249 Aquilegia oxysepala HOM05D003105 ORTHO05D003471 1.4e-08 64.3 181 32.6
Cfa009403 Carpinus fangiana HOM05D003105 ORTHO05D003471 1.4e-08 64.3 180 31.1
DCAR_025456 Daucus carota HOM05D003328 ORTHO05D003722 1.4e-08 64.3 198 32.3
Glyma.19G096200 Glycine max HOM05D003105 ORTHO05D003471 1.4e-08 64.3 161 31.7
CANSAT01G0148 Cannabis sativa HOM05D003105 ORTHO05D003471 1.8e-08 63.9 224 29.5
Gohir.D07G239000 Gossypium hirsutum HOM05D003105 ORTHO05D003471 1.8e-08 63.9 154 31.2
SEGI_28043 Sequoiadendron giganteum HOM05D003761 ORTHO05D004412 1.8e-08 63.9 166 29.5
HPP92_001927 Vanilla planifolia HOM05D003105 ORTHO05D003471 1.8e-08 63.9 201 29.4
Aqoxy3G03729 Aquilegia oxysepala HOM05D003328 ORTHO05D003722 2.4e-08 63.5 166 31.9
VMungo1383G2771 Vigna mungo HOM05D003105 ORTHO05D003471 2.4e-08 63.5 162 32.7
Gorai.001G275000 Gossypium raimondii HOM05D003105 ORTHO05D003471 3.1e-08 63.2 154 31.2
Lalb_Chr22g0360191 Lupinus albus HOM05D003105 ORTHO05D003471 3.1e-08 63.2 162 32.7
VMungo0464G0668 Vigna mungo HOM05D003328 ORTHO05D003722 3.1e-08 63.2 173 31.2
Lsat_1_v5_gn_4_2141 Lactuca sativa HOM05D003105 ORTHO05D003471 4.0e-08 62.8 197 32.0
Lalb_Chr02g0158801 Lupinus albus HOM05D003328 ORTHO05D003722 4.0e-08 62.8 177 32.8
MD09G1075500 Malus domestica HOM05D003328 ORTHO05D003722 4.0e-08 62.8 193 29.5
Migut.K00883 Erythranthe guttata HOM05D003328 ORTHO05D003722 5.3e-08 62.4 231 31.6
Glyma.16G053200 Glycine max HOM05D003105 ORTHO05D003471 5.3e-08 62.4 160 32.5
Gohir.A03G150400 Gossypium hirsutum HOM05D003105 ORTHO05D003471 5.3e-08 62.4 155 29.7
Gohir.A07G231800 Gossypium hirsutum HOM05D003105 ORTHO05D003471 5.3e-08 62.4 154 31.2
HanXRQChr17g0551651 Helianthus annuus HOM05D003105 ORTHO05D003471 5.3e-08 62.4 150 30.7
Actinidia26271 Actinidia chinensis HOM05D003328 ORTHO05D003722 6.9e-08 62.0 198 30.8
CSS0002115 Camellia sinensis var. sinensis HOM05D003328 ORTHO05D003722 6.9e-08 62.0 206 28.2
CSS0026022 Camellia sinensis var. sinensis HOM05D003328 ORTHO05D003722 6.9e-08 62.0 206 28.2
Psat0s1842g0120 Pisum sativum HOM05D003105 ORTHO05D003471 6.9e-08 62.0 165 31.5
TPR.G8570 Trifolium pratense HOM05D003105 ORTHO05D003471 6.9e-08 62.0 129 33.3
arahy.Tifrunner.gnm1.ann1.WJSS10 Arachis hypogaea HOM05D003328 ORTHO05D003722 9.0e-08 61.6 182 28.6
Sed0001071 Sechium edule HOM05D003105 ORTHO05D003471 9.0e-08 61.6 203 29.6
Gorai.005G194900 Gossypium raimondii HOM05D003105 ORTHO05D003471 1.2e-07 61.2 129 31.0
Manes.04G087900 Manihot esculenta HOM05D003105 ORTHO05D003471 1.2e-07 61.2 130 32.3
Phvul.001G089800 Phaseolus vulgaris HOM05D003105 ORTHO05D003471 1.2e-07 61.2 162 32.7
Potri.001G326200 Populus trichocarpa HOM05D003105 ORTHO05D003471 1.2e-07 61.2 153 31.4
Sabra04G0071400 Salix brachista HOM05D003328 ORTHO05D003722 1.2e-07 61.2 166 33.7
BcaC08g44504 Brassica carinata HOM05D003105 ORTHO05D003471 1.5e-07 60.8 165 30.9
ECA246G1262 Erigeron canadensis HOM05D000482 ORTHO05D000349 1.5e-07 60.8 144 31.2
Gohir.D02G173200 Gossypium hirsutum HOM05D003105 ORTHO05D003471 1.5e-07 60.8 155 29.0
Rhsim10G0004200 Rhododendron simsii HOM05D003105 ORTHO05D003471 1.5e-07 60.8 146 30.8
vmacro05978 Vaccinium macrocarpon HOM05D003105 ORTHO05D003471 2.0e-07 60.5 134 32.8
AT5G41050 Arabidopsis thaliana HOM05D003105 ORTHO05D003471 2.6e-07 60.1 166 29.5
CANSAT64G0009 Cannabis sativa HOM05D003105 ORTHO05D003471 2.6e-07 60.1 136 30.9
Ciclev10016966m.g Citrus clementina HOM05D003105 ORTHO05D003471 2.6e-07 60.1 135 31.1
Gohir.A05G336300 Gossypium hirsutum HOM05D003105 ORTHO05D003471 2.6e-07 60.1 123 34.1
Gohir.D04G074800 Gossypium hirsutum HOM05D003105 ORTHO05D003471 2.6e-07 60.1 123 34.1
AL7G48500 Arabidopsis lyrata HOM05D003105 ORTHO05D003471 3.4e-07 59.7 166 29.5
CAN.G473.126 Capsicum annuum HOM05D003105 ORTHO05D003471 3.4e-07 59.7 134 32.1
Cpa.g.sc70.117 Carica papaya HOM05D003105 ORTHO05D003471 3.4e-07 59.7 154 32.5
Phvul.004G042600 Phaseolus vulgaris HOM05D003328 ORTHO05D003722 3.4e-07 59.7 173 31.2
Actinidia36220 Actinidia chinensis HOM05D003105 ORTHO05D003471 4.5e-07 59.3 153 32.0
Carub.0007s3444 Capsella rubella HOM05D003105 ORTHO05D003471 4.5e-07 59.3 162 29.6
VMungo1383G3466 Vigna mungo HOM05D003991 ORTHO05D004883 4.5e-07 59.3 180 34.4
BraA10t44569Z Brassica rapa HOM05D003105 ORTHO05D003471 5.8e-07 58.9 197 30.5
Glyma.19G035700 Glycine max HOM05D003328 ORTHO05D003722 5.8e-07 58.9 175 31.4
Nitab4.5_0005858g0020 Nicotiana tabacum HOM05D003105 ORTHO05D003471 5.8e-07 58.9 141 29.8
Sc11g0000300 Simmondsia chinensis HOM05D003105 ORTHO05D003471 5.8e-07 58.9 195 31.3
Ciclev10012100m.g Citrus clementina HOM05D003328 ORTHO05D003722 1.0e-06 58.2 193 30.6
Duzib187G0713 Durio zibethinus HOM05D003105 ORTHO05D003471 1.0e-06 58.2 152 30.9
Lsat_1_v5_gn_0_3380 Lactuca sativa HOM05D003105 ORTHO05D003471 1.0e-06 58.2 129 31.0
Nn3g16368 Nelumbo nucifera HOM05D003105 ORTHO05D003471 1.0e-06 58.2 153 30.7
Nitab4.5_0000519g0060 Nicotiana tabacum HOM05D003105 ORTHO05D003471 1.0e-06 58.2 141 29.8
Potri.017G068400 Populus trichocarpa HOM05D003105 ORTHO05D003471 1.0e-06 58.2 136 33.1
GSVIVG01033047001 Vitis vinifera HOM05D003105 ORTHO05D003471 1.0e-06 58.2 134 31.3
CARHR213320 Cardamine hirsuta HOM05D003105 ORTHO05D003471 1.3e-06 57.8 167 29.3
SEGI_16578 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 1.3e-06 57.8 158 29.7
CSS0029953 Camellia sinensis var. sinensis HOM05D003105 ORTHO05D003471 1.7e-06 57.4 130 32.3
SGA_v2.0_scaffold44G16932 Striga asiatica HOM05D003105 ORTHO05D003471 1.7e-06 57.4 163 27.6
TPR.G15627 Trifolium pratense HOM05D003105 ORTHO05D003471 1.7e-06 57.4 158 29.7
A10p25080 Brassica napus HOM05D003105 ORTHO05D003471 2.2e-06 57.0 198 29.8
Hma1.2p1_0525F.1_g172590 Hydrangea macrophylla HOM05D003105 ORTHO05D003471 2.2e-06 57.0 157 28.0
BolC6t37149H Brassica oleracea HOM05D003105 ORTHO05D003471 2.9e-06 56.6 166 30.1
Sabra16G0208700 Salix brachista HOM05D003105 ORTHO05D003471 2.9e-06 56.6 132 30.3
Solyc02g094330.3 Solanum lycopersicum HOM05D003105 ORTHO05D003471 2.9e-06 56.6 134 31.3
Sopen02g038980 Solanum pennellii HOM05D003105 ORTHO05D003471 2.9e-06 56.6 134 31.3
PGSC0003DMG400020204 Solanum tuberosum HOM05D003105 ORTHO05D003471 2.9e-06 56.6 134 31.3
TWI34G0266 Tripterygium wilfordii HOM05D003105 ORTHO05D003471 2.9e-06 56.6 152 29.6
TWI34G0640 Tripterygium wilfordii HOM05D003105 ORTHO05D003471 2.9e-06 56.6 152 29.6
Atru.chr6.2604 Acer truncatum HOM05D003105 ORTHO05D003471 3.8e-06 56.2 156 30.1
arahy.Tifrunner.gnm1.ann1.E5Z218 Arachis hypogaea HOM05D003105 ORTHO05D003471 3.8e-06 56.2 135 28.9
BcaB02g07915 Brassica carinata HOM05D003105 ORTHO05D003471 3.8e-06 56.2 165 30.3
C06p19560 Brassica napus HOM05D003105 ORTHO05D003471 3.8e-06 56.2 166 30.7
DCAR_025455 Daucus carota HOM05D003328 ORTHO05D003722 3.8e-06 56.2 204 28.4
FAN07G2884 Fragaria x ananassa HOM05D003105 ORTHO05D003471 3.8e-06 56.2 222 27.5
Lj6A832T39 Lonicera japonica HOM05D003105 ORTHO05D003471 3.8e-06 56.2 189 30.2
Manes.11G083400 Manihot esculenta HOM05D003105 ORTHO05D003471 3.8e-06 56.2 150 28.7
Medtr7g405770 Medicago truncatula HOM05D003105 ORTHO05D003471 3.8e-06 56.2 136 31.6
Phvul.008G026300 Phaseolus vulgaris HOM05D003328 ORTHO05D003722 3.8e-06 56.2 197 31.5
SalBow4G2474 Salvia bowleyana HOM05D003105 ORTHO05D003471 3.8e-06 56.2 150 30.7
SalBow4G2791 Salvia bowleyana HOM05D003105 ORTHO05D003471 3.8e-06 56.2 150 30.7
SEGI_16110 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 3.8e-06 56.2 165 28.5
SEGI_33454 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 3.8e-06 56.2 121 30.6
arahy.Tifrunner.gnm1.ann1.XNCV96 Arachis hypogaea HOM05D003105 ORTHO05D003471 4.9e-06 55.8 135 28.9
EL10Ac6g15447 Beta vulgaris HOM05D003105 ORTHO05D003471 4.9e-06 55.8 139 29.5
BcaB04g19421 Brassica carinata HOM05D003105 ORTHO05D003471 4.9e-06 55.8 155 29.7
Medtr6g015995 Medicago truncatula HOM05D003328 ORTHO05D003722 4.9e-06 55.8 203 30.5
Sabra17G0059700 Salix brachista HOM05D003105 ORTHO05D003471 4.9e-06 55.8 132 30.3
Hund12823 Selenicereus undatus HOM05D003105 ORTHO05D003471 4.9e-06 55.8 158 32.3
AL6G23740 Arabidopsis lyrata HOM05D003105 ORTHO05D003471 6.4e-06 55.5 196 30.6
BcaB06g27587 Brassica carinata HOM05D003105 ORTHO05D003471 6.4e-06 55.5 166 27.1
A07p20640 Brassica napus HOM05D003105 ORTHO05D003471 6.4e-06 55.5 166 29.5
BraA07t29753Z Brassica rapa HOM05D003105 ORTHO05D003471 6.4e-06 55.5 166 29.5
Oeu035354.1 Olea europaea HOM05D003105 ORTHO05D003471 6.4e-06 55.5 155 31.0
BcaNung02204 Brassica carinata HOM05D003328 ORTHO05D003722 8.4e-06 55.1 202 31.2
BolC9t59234H Brassica oleracea HOM05D003105 ORTHO05D003471 8.4e-06 55.1 198 30.3
Carub.0006s1393 Capsella rubella HOM05D003328 ORTHO05D003722 8.4e-06 55.1 200 31.0
Eucgr.H03355 Eucalyptus grandis HOM05D003105 ORTHO05D003471 8.4e-06 55.1 150 28.7
Oeu048930.1 Olea europaea HOM05D003105 ORTHO05D003471 8.4e-06 55.1 155 31.0
Peaxi162Scf00420g00642 Petunia axillaris HOM05D003105 ORTHO05D003471 8.4e-06 55.1 161 30.4


User provided reference genes

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