Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 1.5e-164 582.8 290 100.0
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.6e-131 473.0 293 80.9
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 5.8e-129 464.5 291 79.0
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 5.8e-129 464.5 291 80.1
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 1.7e-128 463.0 288 79.9
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 1.1e-127 460.3 287 79.1
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.4e-127 459.9 286 81.1
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 1.4e-127 459.9 299 75.6
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 1.4e-127 459.9 289 77.9
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 1.4e-127 459.9 290 79.7
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 2.4e-127 459.1 281 80.1
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 4.2e-127 458.4 288 78.5
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 5.4e-127 458.0 288 78.8
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 5.4e-127 458.0 287 79.8
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 5.4e-127 458.0 291 78.7
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 5.4e-127 458.0 296 77.7
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 7.1e-127 457.6 288 78.8
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 1.2e-126 456.8 281 80.4
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 1.6e-126 456.4 303 74.3
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 1.6e-126 456.4 280 79.6
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 2.1e-126 456.1 284 79.6
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 2.1e-126 456.1 284 79.6
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 2.1e-126 456.1 284 79.6
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 2.1e-126 456.1 301 77.1
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 3.5e-126 455.3 288 77.4
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 4.6e-126 454.9 279 79.6
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 6.0e-126 454.5 284 79.2
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 6.0e-126 454.5 288 77.8
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 7.9e-126 454.1 286 79.0
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 7.9e-126 454.1 294 77.2
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 1.0e-125 453.8 279 79.6
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 1.0e-125 453.8 279 78.9
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 1.3e-125 453.4 288 78.1
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 1.3e-125 453.4 278 79.9
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 1.7e-125 453.0 291 77.3
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 1.7e-125 453.0 287 78.0
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 1.7e-125 453.0 279 79.6
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 1.7e-125 453.0 296 75.7
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.7e-125 453.0 292 77.4
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 1.7e-125 453.0 290 77.9
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 1.7e-125 453.0 291 78.0
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 1.7e-125 453.0 292 77.4
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 3.0e-125 452.2 279 79.6
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 3.9e-125 451.8 288 77.1
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 5.1e-125 451.4 291 78.0
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 6.6e-125 451.1 289 77.5
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 6.6e-125 451.1 294 75.9
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 8.7e-125 450.7 283 79.9
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 8.7e-125 450.7 291 77.3
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 1.5e-124 449.9 290 77.2
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 1.5e-124 449.9 280 78.6
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 2.5e-124 449.1 296 75.3
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 2.5e-124 449.1 288 77.8
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 2.5e-124 449.1 293 77.1
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 3.3e-124 448.7 282 79.8
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 3.3e-124 448.7 279 77.8
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 4.3e-124 448.4 278 78.4
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 5.6e-124 448.0 294 77.2
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 7.4e-124 447.6 294 76.5
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 7.4e-124 447.6 278 78.4
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 1.3e-123 446.8 291 77.7
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 1.3e-123 446.8 283 79.2
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 1.3e-123 446.8 279 78.9
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 2.1e-123 446.0 282 78.0
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 2.8e-123 445.7 288 75.3
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 3.6e-123 445.3 281 78.6
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 3.6e-123 445.3 298 75.5
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 3.6e-123 445.3 280 79.3
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 4.8e-123 444.9 285 76.5
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 6.2e-123 444.5 286 78.3
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 6.2e-123 444.5 286 78.0
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 6.2e-123 444.5 278 78.1
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 6.2e-123 444.5 284 78.2
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 8.1e-123 444.1 292 75.0
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 8.1e-123 444.1 282 77.3
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 1.4e-122 443.4 276 77.9
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 2.4e-122 442.6 278 78.1
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 2.4e-122 442.6 279 77.4
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 5.3e-122 441.4 290 75.2
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 5.3e-122 441.4 278 77.7
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 5.3e-122 441.4 290 75.9
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 9.0e-122 440.7 281 77.6
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 1.5e-121 439.9 287 77.4
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.5e-121 439.9 290 75.5
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 2.0e-121 439.5 279 77.4
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 2.6e-121 439.1 281 76.9
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 3.4e-121 438.7 281 77.6
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 3.4e-121 438.7 298 73.5
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 5.8e-121 438.0 283 76.0
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 5.8e-121 438.0 296 74.7
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 5.8e-121 438.0 294 74.1
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 7.6e-121 437.6 274 78.8
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 9.9e-121 437.2 282 77.0
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 1.3e-120 436.8 291 74.6
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 1.3e-120 436.8 279 77.1
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 2.2e-120 436.0 290 74.5
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 2.2e-120 436.0 298 74.5
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 4.9e-120 434.9 281 76.9
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 4.9e-120 434.9 296 74.0
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 6.4e-120 434.5 278 76.6
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 1.4e-119 433.3 288 73.6
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 4.2e-119 431.8 279 76.0
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 7.1e-119 431.0 296 72.6
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 7.1e-119 431.0 293 74.7
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 2.1e-118 429.5 289 74.4
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 2.7e-118 429.1 278 77.7
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 6.0e-118 427.9 263 78.7
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.0e-117 427.2 276 76.4
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 7.4e-116 421.0 294 73.1
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 9.6e-116 420.6 295 71.5
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 1.1e-114 417.2 310 69.0
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 1.4e-114 416.8 307 70.7
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 3.1e-114 415.6 266 78.2
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 3.1e-114 415.6 277 76.2
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 1.0e-112 410.6 286 74.1
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 1.0e-112 410.6 288 72.2
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 2.9e-112 409.1 278 74.5
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 4.2e-111 405.2 279 74.2
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 1.2e-110 403.7 308 67.2
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 2.7e-110 402.5 266 76.7
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 1.1e-108 397.1 278 73.0
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 1.9e-108 396.4 248 76.6
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 2.5e-108 396.0 246 79.3
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 7.4e-108 394.4 361 59.8
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 1.1e-106 390.6 219 84.5
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 3.1e-106 389.0 254 76.4
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 6.9e-106 387.9 283 66.8
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 9.0e-106 387.5 251 74.9
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 1.5e-105 386.7 250 72.8
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 2.2e-104 382.9 281 70.5
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 2.2e-104 382.9 219 82.6
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 2.1e-102 376.3 216 83.3
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 2.1e-102 376.3 216 83.3
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 2.2e-99 366.3 251 70.1
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 1.2e-94 350.5 198 84.8
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.0e-88 330.9 299 60.9
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 1.0e-88 330.9 221 74.2
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 1.4e-87 327.0 215 75.8
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 5.2e-85 318.5 180 84.4
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 5.7e-84 315.1 180 84.4
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 1.3e-80 303.9 212 72.2
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 3.3e-76 289.3 172 80.8
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 1.6e-73 280.4 187 74.3
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 2.7e-73 279.6 219 68.9
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 4.0e-69 265.8 152 85.5
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 5.4e-66 255.4 194 67.0
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 2.5e-63 246.5 145 84.1
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 2.9e-56 223.0 209 60.3
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 3.9e-48 196.1 243 49.0
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 1.2e-44 184.5 119 71.4
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 4.9e-43 179.1 149 65.1
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 3.2e-42 176.4 135 68.1
Lj8A156T78 Lonicera japonica HOM05D003815 ORTHO05D004580 3.9e-40 169.5 178 55.6
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 1.2e-38 164.5 105 73.3
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 8.3e-35 151.8 86 79.1
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 2.7e-33 146.7 96 71.9
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 4.7e-30 136.0 305 32.1
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 2.9e-27 126.7 94 66.0
Lj3g0015923 Lotus japonicus HOM05D003815 ORTHO05D004580 2.9e-27 126.7 191 46.1
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 1.2e-25 121.3 189 41.3
BcaC08g43686 Brassica carinata HOM05D003815 ORTHO05D004580 1.3e-24 117.9 66 87.9
BolC6t36186H Brassica oleracea HOM05D003815 ORTHO05D004580 1.3e-24 117.9 66 87.9
BolC6t36614H Brassica oleracea HOM05D003815 ORTHO05D004580 4.0e-21 106.3 87 66.7
PSO017G7235 Papaver somniferum HOM05D003815 ORTHO05D004580 2.8e-14 83.6 45 80.0
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 4.8e-14 82.8 79 53.2
Sopen05g017440 Solanum pennellii HOM05D003815 ORTHO05D004580 1.8e-13 80.9 156 36.5
Sopen05g018740 Solanum pennellii HOM05D000002 ORTHO05D000001 3.1e-13 80.1 82 53.7
BolC9t59438H Brassica oleracea HOM05D003815 ORTHO05D004580 9.9e-12 75.1 92 47.8
ATR0730G237 Amborella trichopoda HOM05D003815 ORTHO05D004580 2.9e-11 73.6 70 61.4
C09p66180 Brassica napus HOM05D003815 ORTHO05D004580 3.2e-10 70.1 103 40.8
Ca_12192_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 1.2e-09 68.2 62 62.9
Ca_30580_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 1.2e-09 68.2 62 62.9
Solyc04g079020.4 Solanum lycopersicum HOM05D003815 ORTHO05D004580 3.9e-08 63.2 110 37.3
COL.COLO4_31682 Corchorus olitorius HOM05D000007 ORTHO05D000017 8.7e-08 62.0 43 74.4
Oeu026881.1 Olea europaea HOM05D001611 ORTHO05D001464 1.5e-07 61.2 57 49.1
Actinidia16545 Actinidia chinensis HOM05D003815 ORTHO05D056144 4.3e-07 59.7 64 50.0
Actinidia24031 Actinidia chinensis HOM05D003815 ORTHO05D004580 7.4e-07 58.9 34 76.5
Lj2g0024488 Lotus japonicus HOM05D003815 ORTHO05D004580 2.1e-06 57.4 38 76.3
Lj8C156T6 Lonicera japonica HOM05D003815 ORTHO05D004580 2.8e-06 57.0 60 55.0
MCO17G054 Micromonas commoda HOM05D003815 ORTHO05D270498 3.7e-06 56.6 144 31.9


User provided reference genes

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