Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36168 Sequoiadendron giganteum HOM05D000447 ORTHO05D386753 2.9e-38 161.4 81 100.0
SEGI_17690 Sequoiadendron giganteum HOM05D000038 ORTHO05D000689 9.2e-08 60.1 46 71.7
SEGI_24534 Sequoiadendron giganteum HOM05D000447 ORTHO05D000315 7.8e-07 57.0 35 82.9
Cfa014897 Carpinus fangiana HOM05D000447 ORTHO05D000315 1.0e-06 56.6 37 75.7
Cc00_g19010 Coffea canephora HOM05D000447 ORTHO05D000315 1.0e-06 56.6 38 73.7
Cc00_g32030 Coffea canephora HOM05D000447 ORTHO05D000315 1.0e-06 56.6 38 73.7
Dinv29561 Davidia involucrata HOM05D000447 ORTHO05D000315 1.0e-06 56.6 35 85.7
Rhsim02G0053700 Rhododendron simsii HOM05D000447 ORTHO05D000315 1.0e-06 56.6 35 85.7
vmacro15508 Vaccinium macrocarpon HOM05D000447 ORTHO05D000315 1.0e-06 56.6 35 85.7
CSS0030597 Camellia sinensis var. sinensis HOM05D000447 ORTHO05D000315 1.3e-06 56.2 35 82.9
CiPaw.01G125400 Carya illinoinensis HOM05D000447 ORTHO05D000315 1.3e-06 56.2 35 82.9
Duzib151G0643 Durio zibethinus HOM05D000447 ORTHO05D000315 1.3e-06 56.2 35 82.9
Duzib212G0803 Durio zibethinus HOM05D000447 ORTHO05D000315 1.3e-06 56.2 35 82.9
Duzib268G1094 Durio zibethinus HOM05D000447 ORTHO05D000315 1.3e-06 56.2 35 82.9
Hma1.2p1_0691F.1_g204240 Hydrangea macrophylla HOM05D000447 ORTHO05D000315 1.3e-06 56.2 35 82.9
SEGI_03730 Sequoiadendron giganteum HOM05D000447 ORTHO05D000315 1.3e-06 56.2 35 82.9
SEGI_17462 Sequoiadendron giganteum HOM05D000447 ORTHO05D000315 1.3e-06 56.2 35 82.9
SEGI_19968 Sequoiadendron giganteum HOM05D000447 ORTHO05D000315 1.3e-06 56.2 35 82.9
SEGI_37875 Sequoiadendron giganteum HOM05D000447 ORTHO05D000315 1.3e-06 56.2 35 82.9
TAR362G1054 Trochodendron aralioides HOM05D000447 ORTHO05D000315 1.3e-06 56.2 35 82.9
TAR636G1162 Trochodendron aralioides HOM05D000447 ORTHO05D000315 1.3e-06 56.2 35 82.9
GSVIVG01032968001 Vitis vinifera HOM05D000447 ORTHO05D000315 1.3e-06 56.2 35 82.9
Cpa.g.sc59.102 Carica papaya HOM05D000447 ORTHO05D000315 1.7e-06 55.8 38 71.1
Nn4g22100 Nelumbo nucifera HOM05D000447 ORTHO05D000315 1.7e-06 55.8 35 80.0
Actinidia34624 Actinidia chinensis HOM05D000447 ORTHO05D000315 3.0e-06 55.1 38 73.7
Actinidia35952 Actinidia chinensis HOM05D000447 ORTHO05D000315 3.0e-06 55.1 38 73.7
MSTRG.4210 Avicennia marina HOM05D000447 ORTHO05D000315 3.0e-06 55.1 38 71.1
COL.COLO4_13390 Corchorus olitorius HOM05D000447 ORTHO05D000315 3.0e-06 55.1 35 80.0
COL.COLO4_20309 Corchorus olitorius HOM05D000447 ORTHO05D000315 3.0e-06 55.1 35 80.0
Dinv25611 Davidia involucrata HOM05D000447 ORTHO05D000315 3.0e-06 55.1 35 80.0
Glyma.01G228700 Glycine max HOM05D000447 ORTHO05D000315 3.0e-06 55.1 35 80.0
Glyma.11G011500 Glycine max HOM05D000447 ORTHO05D000315 3.0e-06 55.1 35 80.0
LjContig00222g0012656 Lotus japonicus HOM05D000447 ORTHO05D000315 3.0e-06 55.1 35 80.0
LjContig00222g0026015 Lotus japonicus HOM05D000447 ORTHO05D000315 3.0e-06 55.1 35 80.0
SEGI_13095 Sequoiadendron giganteum HOM05D000447 ORTHO05D000315 3.0e-06 55.1 35 80.0
SEGI_29861 Sequoiadendron giganteum HOM05D000447 ORTHO05D000315 3.0e-06 55.1 35 80.0
SEGI_37514 Sequoiadendron giganteum HOM05D000447 ORTHO05D000315 3.0e-06 55.1 35 80.0
TAR633G0470 Trochodendron aralioides HOM05D000447 ORTHO05D000315 3.0e-06 55.1 35 80.0
Actinidia11396 Actinidia chinensis HOM05D000447 ORTHO05D000315 3.9e-06 54.7 35 82.9
Ciclev10005133m.g Citrus clementina HOM05D000447 ORTHO05D000315 3.9e-06 54.7 35 80.0
Dinv32584 Davidia involucrata HOM05D000447 ORTHO05D000315 3.9e-06 54.7 35 80.0
Eucgr.H02828 Eucalyptus grandis HOM05D000447 ORTHO05D000315 3.9e-06 54.7 35 77.1
PGR142G2297 Punica granatum HOM05D000447 ORTHO05D000315 3.9e-06 54.7 38 71.1
arahy.Tifrunner.gnm1.ann1.0FI6RG Arachis hypogaea HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 77.1
arahy.Tifrunner.gnm1.ann1.UDJX6I Arachis hypogaea HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 77.1
CAN.G500.76 Capsicum annuum HOM05D000447 ORTHO05D000315 5.1e-06 54.3 38 71.1
Cfa014895 Carpinus fangiana HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Cfa014899 Carpinus fangiana HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Haze_11574 Corylus avellana HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Migut.G00627 Erythranthe guttata HOM05D000447 ORTHO05D000315 5.1e-06 54.3 38 71.1
Glyma.01G091400 Glycine max HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Glyma.05G153200 Glycine max HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Glyma.08G109300 Glycine max HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Glyma.08G109400 Glycine max HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Glyma.08G109500 Glycine max HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Glyma.08G110300 Glycine max HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Glyma.08G110420 Glycine max HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Glyma.08G110460 Glycine max HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Glyma.08G110801 Glycine max HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Glyma.08G110901 Glycine max HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Gohir.A02G024200 Gossypium hirsutum HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Gohir.A05G318401 Gossypium hirsutum HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Gohir.A10G121700 Gossypium hirsutum HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Gohir.A10G121800 Gossypium hirsutum HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Gohir.D02G031600 Gossypium hirsutum HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Gohir.D05G317000 Gossypium hirsutum HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Gohir.D10G144300 Gossypium hirsutum HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Gohir.D10G144400 Gossypium hirsutum HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Gorai.005G035100 Gossypium raimondii HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Gorai.009G339300 Gossypium raimondii HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Lalb_Chr05g0211281 Lupinus albus HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Lalb_Chr07g0186761 Lupinus albus HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Medtr5g007730 Medicago truncatula HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Oeu016712.1 Olea europaea HOM05D000447 ORTHO05D000315 5.1e-06 54.3 38 71.1
Phvul.001G083000 Phaseolus vulgaris HOM05D000447 ORTHO05D000315 5.1e-06 54.3 38 71.1
SEGI_35044 Sequoiadendron giganteum HOM05D000447 ORTHO05D000315 5.1e-06 54.3 35 80.0
Solyc09g091510.3 Solanum lycopersicum HOM05D000447 ORTHO05D000315 5.1e-06 54.3 38 71.1
Sopen09g034440 Solanum pennellii HOM05D000447 ORTHO05D000315 5.1e-06 54.3 38 71.1
PGSC0003DMG400029620 Solanum tuberosum HOM05D000447 ORTHO05D000315 5.1e-06 54.3 38 71.1
Atru.chr4.1773 Acer truncatum HOM05D000447 ORTHO05D000315 6.6e-06 53.9 35 82.9
arahy.Tifrunner.gnm1.ann1.GSLK7G Arachis hypogaea HOM05D000447 ORTHO05D000315 6.6e-06 53.9 35 77.1
arahy.Tifrunner.gnm1.ann1.S4FMHZ Arachis hypogaea HOM05D000447 ORTHO05D000315 6.6e-06 53.9 35 77.1
CAN.G765.1 Capsicum annuum HOM05D000447 ORTHO05D000315 6.6e-06 53.9 38 71.1
Lj1g0006517 Lotus japonicus HOM05D000447 ORTHO05D000315 6.6e-06 53.9 35 77.1
MBI07_g21059_MAGBIO Magnolia biondii HOM05D000447 ORTHO05D000315 6.6e-06 53.9 35 80.0
TAR371G0435 Trochodendron aralioides HOM05D000447 ORTHO05D000315 6.6e-06 53.9 35 77.1
CAN.G305.2 Capsicum annuum HOM05D000447 ORTHO05D000315 8.6e-06 53.5 38 71.1
Ciclev10015535m.g Citrus clementina HOM05D000447 ORTHO05D000315 8.6e-06 53.5 35 77.1
COL.COLO4_27163 Corchorus olitorius HOM05D000447 ORTHO05D000315 8.6e-06 53.5 38 71.1
Migut.G00628 Erythranthe guttata HOM05D000447 ORTHO05D000315 8.6e-06 53.5 35 77.1
Manes.03G150000 Manihot esculenta HOM05D000447 ORTHO05D000315 8.6e-06 53.5 35 77.1
Nitab4.5_0001066g0070 Nicotiana tabacum HOM05D000447 ORTHO05D000315 8.6e-06 53.5 38 71.1
Nitab4.5_0014110g0010 Nicotiana tabacum HOM05D000447 ORTHO05D000315 8.6e-06 53.5 38 71.1
Phvul.002G038600 Phaseolus vulgaris HOM05D000447 ORTHO05D000315 8.6e-06 53.5 35 77.1
Phvul.002G038700 Phaseolus vulgaris HOM05D000447 ORTHO05D000315 8.6e-06 53.5 35 77.1
Phvul.002G038800 Phaseolus vulgaris HOM05D000447 ORTHO05D000315 8.6e-06 53.5 35 77.1
Phvul.002G038900 Phaseolus vulgaris HOM05D000447 ORTHO05D000315 8.6e-06 53.5 35 77.1
Phvul.002G039000 Phaseolus vulgaris HOM05D000447 ORTHO05D000315 8.6e-06 53.5 35 77.1
Phvul.002G039100 Phaseolus vulgaris HOM05D000447 ORTHO05D000315 8.6e-06 53.5 35 77.1
Phvul.002G039166 Phaseolus vulgaris HOM05D000447 ORTHO05D000315 8.6e-06 53.5 35 77.1
Phvul.002G039232 Phaseolus vulgaris HOM05D000447 ORTHO05D000315 8.6e-06 53.5 35 77.1
Phvul.002G039300 Phaseolus vulgaris HOM05D000447 ORTHO05D000315 8.6e-06 53.5 35 77.1
Phvul.002G184300 Phaseolus vulgaris HOM05D000447 ORTHO05D000315 8.6e-06 53.5 35 77.1
TAR365G0830 Trochodendron aralioides HOM05D000447 ORTHO05D000315 8.6e-06 53.5 35 77.1
TAR365G0887 Trochodendron aralioides HOM05D000447 ORTHO05D000315 8.6e-06 53.5 35 77.1


User provided reference genes

Program Settings