Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36158 Sequoiadendron giganteum HOM05D003640 ORTHO05D004439 1.6e-232 809.3 481 100.0
Mapoly0021s0043 Marchantia polymorpha HOM05D003640 ORTHO05D004439 1.6e-78 297.7 489 44.0
Pp3c14_13150 Physcomitrium patens HOM05D003640 ORTHO05D004439 2.3e-69 267.3 421 45.4
Nn1g00405 Nelumbo nucifera HOM05D003640 ORTHO05D004439 7.8e-62 242.3 355 42.0
CSS0041088 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 5.0e-61 239.6 355 45.1
TAR629G0154 Trochodendron aralioides HOM05D003640 ORTHO05D004439 2.5e-60 237.3 363 41.9
Nn3g18833 Nelumbo nucifera HOM05D003640 ORTHO05D004439 1.2e-59 235.0 304 46.1
QL09p007408 Quercus lobata HOM05D003640 ORTHO05D004439 2.8e-59 233.8 361 44.9
TAR636G3562 Trochodendron aralioides HOM05D003640 ORTHO05D004439 8.1e-59 232.3 363 44.6
GSVIVG01038625001 Vitis vinifera HOM05D003640 ORTHO05D004439 1.4e-58 231.5 355 44.2
Dinv29226 Davidia involucrata HOM05D003640 ORTHO05D004439 5.2e-58 229.6 380 39.5
QL93p0214_0013 Quercus lobata HOM05D003640 ORTHO05D004439 5.2e-58 229.6 361 44.3
ATR0580G072 Amborella trichopoda HOM05D003640 ORTHO05D004439 9.8e-57 225.3 340 45.6
Haze_00277 Corylus avellana HOM05D003640 ORTHO05D004439 9.8e-57 225.3 309 46.3
FAN10G2795 Fragaria x ananassa HOM05D003640 ORTHO05D004439 1.3e-56 224.9 348 47.4
FAN10G0822 Fragaria x ananassa HOM05D003640 ORTHO05D004439 2.2e-56 224.2 348 47.1
Sabra15G0004700 Salix brachista HOM05D003640 ORTHO05D004439 2.2e-56 224.2 358 41.1
ClCG01G000140 Citrullus lanatus HOM05D003640 ORTHO05D004439 2.9e-56 223.8 350 42.6
Prupe.2G317300 Prunus persica HOM05D003640 ORTHO05D004439 1.4e-55 221.5 356 40.7
Actinidia08687 Actinidia chinensis HOM05D003640 ORTHO05D004439 1.9e-55 221.1 355 42.3
FAN03G1455 Fragaria x ananassa HOM05D003640 ORTHO05D004439 3.2e-55 220.3 349 46.7
MELO3C005925.2 Cucumis melo HOM05D003640 ORTHO05D004439 5.4e-55 219.5 330 42.7
Pp3c17_17470 Physcomitrium patens HOM05D003640 ORTHO05D004439 5.4e-55 219.5 467 34.9
Sed0000635 Sechium edule HOM05D003640 ORTHO05D004439 5.4e-55 219.5 309 42.7
PGR142G2086 Punica granatum HOM05D003640 ORTHO05D004439 9.2e-55 218.8 362 41.4
FAN01G0295 Fragaria x ananassa HOM05D003640 ORTHO05D004439 1.2e-54 218.4 340 44.4
Potri.012G023200 Populus trichocarpa HOM05D003640 ORTHO05D004439 1.2e-54 218.4 351 41.3
Actinidia34257 Actinidia chinensis HOM05D003640 ORTHO05D004439 1.6e-54 218.0 322 41.3
CsaV3_5G000020 Cucumis sativus L. HOM05D003640 ORTHO05D004439 1.6e-54 218.0 330 42.4
MD07G1297600 Malus domestica HOM05D003640 ORTHO05D004439 1.6e-54 218.0 356 40.2
MD01G1227300 Malus domestica HOM05D003640 ORTHO05D004439 2.7e-54 217.2 356 39.9
TAR375G0550 Trochodendron aralioides HOM05D003640 ORTHO05D004439 2.7e-54 217.2 357 42.3
Rhsim03G0214000 Rhododendron simsii HOM05D003640 ORTHO05D004439 1.0e-53 215.3 348 44.0
Migut.F00997 Erythranthe guttata HOM05D003640 ORTHO05D004439 1.7e-53 214.5 386 38.1
FvH4_7g32660 Fragaria vesca HOM05D003640 ORTHO05D004439 1.7e-53 214.5 307 46.3
Glyma.06G134300 Glycine max HOM05D003640 ORTHO05D004439 1.7e-53 214.5 346 39.3
Duzib084G0116 Durio zibethinus HOM05D003640 ORTHO05D004439 3.0e-53 213.8 349 43.0
Potri.015G006700 Populus trichocarpa HOM05D003640 ORTHO05D004439 3.0e-53 213.8 390 38.2
Manes.01G041300 Manihot esculenta HOM05D003640 ORTHO05D004439 5.1e-53 213.0 373 43.7
THA.LOC104825162 Tarenaya hassleriana HOM05D003640 ORTHO05D004439 6.6e-53 212.6 358 40.5
CANSAT21G0645 Cannabis sativa HOM05D003640 ORTHO05D004439 2.5e-52 210.7 359 40.4
QL09p007399 Quercus lobata HOM05D003640 ORTHO05D004439 4.3e-52 209.9 344 39.2
QL93p0214_0021 Quercus lobata HOM05D003640 ORTHO05D004439 4.3e-52 209.9 344 39.2
RcHm_v2.0_Chr1g0382521 Rosa chinensis HOM05D003640 ORTHO05D004439 4.3e-52 209.9 355 45.4
Aqoxy7G00014 Aquilegia oxysepala HOM05D003640 ORTHO05D004439 9.5e-52 208.8 357 41.2
TWI39G1295 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 1.6e-51 208.0 349 42.7
Cc02_g00960 Coffea canephora HOM05D003640 ORTHO05D004439 2.1e-51 207.6 304 45.4
HanXRQChr05g0139301 Helianthus annuus HOM05D003640 ORTHO05D004439 2.8e-51 207.2 369 38.5
TWI23G0563 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 2.8e-51 207.2 355 38.3
Lalb_Chr11g0067271 Lupinus albus HOM05D003640 ORTHO05D004439 3.6e-51 206.8 322 39.8
Atru.chr12.2367 Acer truncatum HOM05D003640 ORTHO05D004439 6.2e-51 206.1 301 41.9
Lj1g0027227 Lotus japonicus HOM05D003640 ORTHO05D004439 1.1e-50 205.3 346 37.9
Actinidia28276 Actinidia chinensis HOM05D003640 ORTHO05D004439 1.4e-50 204.9 349 39.0
Aa31sc289G20 Aethionema arabicum HOM05D003640 ORTHO05D004439 1.4e-50 204.9 311 40.5
MSTRG.8618 Avicennia marina HOM05D003640 ORTHO05D004439 1.8e-50 204.5 342 40.4
arahy.Tifrunner.gnm1.ann1.1EDB5Y Arachis hypogaea HOM05D003640 ORTHO05D004439 3.1e-50 203.8 350 40.6
PSO135G0929 Papaver somniferum HOM05D003640 ORTHO05D004439 3.1e-50 203.8 349 39.0
vmacro06427 Vaccinium macrocarpon HOM05D003640 ORTHO05D004439 3.1e-50 203.8 385 37.1
CiPaw.06G042300 Carya illinoinensis HOM05D003640 ORTHO05D004439 4.0e-50 203.4 323 43.3
Sed0021595 Sechium edule HOM05D003640 ORTHO05D004439 4.0e-50 203.4 329 39.2
MBI12_g23004_MAGBIO Magnolia biondii HOM05D003640 ORTHO05D004439 5.2e-50 203.0 391 38.1
arahy.Tifrunner.gnm1.ann1.BT3HV7 Arachis hypogaea HOM05D003640 ORTHO05D004439 8.9e-50 202.2 350 40.0
COL.COLO4_14351 Corchorus olitorius HOM05D003640 ORTHO05D004439 2.0e-49 201.1 361 38.0
PSO384G0385 Papaver somniferum HOM05D003640 ORTHO05D004439 2.0e-49 201.1 331 39.6
SalBow6G0961 Salvia bowleyana HOM05D003640 ORTHO05D004439 2.0e-49 201.1 347 40.3
MSTRG.26989 Avicennia marina HOM05D003640 ORTHO05D004439 3.4e-49 200.3 327 42.5
Ca_16756_v3 Cicer arietinum L. HOM05D003640 ORTHO05D004439 3.4e-49 200.3 331 41.1
Glyma.04G230800 Glycine max HOM05D003640 ORTHO05D004439 4.4e-49 199.9 316 42.4
Lalb_Chr08g0239801 Lupinus albus HOM05D003640 ORTHO05D004439 7.6e-49 199.1 315 40.3
Hund09700 Selenicereus undatus HOM05D003640 ORTHO05D004439 2.2e-48 197.6 354 36.4
Lsat_1_v5_gn_9_50221 Lactuca sativa HOM05D003640 ORTHO05D004439 6.4e-48 196.1 315 40.6
SGA_v2.0_scaffold565G52945 Striga asiatica HOM05D003640 ORTHO05D004439 1.1e-47 195.3 371 37.7
Lsat_1_v5_gn_9_50181 Lactuca sativa HOM05D003640 ORTHO05D004439 1.4e-47 194.9 315 40.6
Hund21040 Selenicereus undatus HOM05D003640 ORTHO05D004439 1.9e-47 194.5 307 40.1
HanXRQChr15g0485391 Helianthus annuus HOM05D003640 ORTHO05D004439 2.4e-47 194.1 316 39.2
Lalb_Chr23g0271841 Lupinus albus HOM05D003640 ORTHO05D004439 2.4e-47 194.1 345 42.3
DCAR_008967 Daucus carota HOM05D003640 ORTHO05D004439 3.2e-47 193.7 336 43.5
ECA232G0587 Erigeron canadensis HOM05D003640 ORTHO05D004439 5.4e-47 193.0 358 37.7
Medtr3g092250 Medicago truncatula HOM05D003640 ORTHO05D004439 9.2e-47 192.2 330 38.2
AUR62006022 Chenopodium quinoa HOM05D003640 ORTHO05D004439 1.2e-46 191.8 344 40.1
Oeu037965.1 Olea europaea HOM05D003640 ORTHO05D004439 1.2e-46 191.8 348 36.8
VMungo1309G3003 Vigna mungo HOM05D003640 ORTHO05D004439 1.2e-46 191.8 346 37.3
Psat0s2807g0080 Pisum sativum HOM05D003640 ORTHO05D004439 2.7e-46 190.7 330 42.1
DCAR_020359 Daucus carota HOM05D003640 ORTHO05D004439 7.8e-46 189.1 300 39.3
MSTRG.8540 Avicennia marina HOM05D003640 ORTHO05D004439 5.1e-45 186.4 318 39.9
Nitab4.5_0001993g0040 Nicotiana tabacum HOM05D003640 ORTHO05D004439 5.6e-44 183.0 370 37.3
Sabra12G0010700 Salix brachista HOM05D003640 ORTHO05D004439 5.6e-44 183.0 403 35.0
CARHR266770 Cardamine hirsuta HOM05D003640 ORTHO05D004439 2.8e-43 180.6 297 43.1
CARHR266800 Cardamine hirsuta HOM05D003640 ORTHO05D004439 3.6e-43 180.3 332 38.9
Zm00001eb037420 Zea mays HOM05D003640 ORTHO05D004439 4.7e-43 179.9 327 37.9
PSO063G3729 Papaver somniferum HOM05D003640 ORTHO05D004439 6.2e-43 179.5 373 34.3
Phvul.009G050200 Phaseolus vulgaris HOM05D003640 ORTHO05D004439 1.1e-42 178.7 346 39.9
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 1.1e-42 178.7 332 41.3
AT5G53620 Arabidopsis thaliana HOM05D003640 ORTHO05D004439 1.4e-42 178.3 347 35.7
Carub.0008s1397 Capsella rubella HOM05D003640 ORTHO05D004439 1.4e-42 178.3 350 39.1
AL8G28460 Arabidopsis lyrata HOM05D003640 ORTHO05D004439 1.8e-42 177.9 334 36.5
Oeu055180.3 Olea europaea HOM05D003640 ORTHO05D004439 1.8e-42 177.9 355 38.6
Thecc.03G206700 Theobroma cacao HOM05D003640 ORTHO05D004439 2.4e-42 177.6 351 37.6
Solyc03g082490.4 Solanum lycopersicum HOM05D003640 ORTHO05D004439 3.1e-42 177.2 353 37.1
EL10Ac3g05201 Beta vulgaris HOM05D003640 ORTHO05D004439 4.0e-42 176.8 379 38.0
unitig_92.g28243 Utricularia gibba HOM05D003640 ORTHO05D004439 4.0e-42 176.8 351 37.0
Dinv35374 Davidia involucrata HOM05D003640 ORTHO05D004439 1.2e-41 175.3 277 44.0
Gohir.D08G115200 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.5e-41 174.9 359 35.9
Gorai.004G124100 Gossypium raimondii HOM05D003640 ORTHO05D004439 2.0e-41 174.5 355 36.9
Os08g0543600 Oryza sativa ssp. japonica HOM05D003640 ORTHO05D004439 2.0e-41 174.5 302 38.4
Gohir.A09G186400 Gossypium hirsutum HOM05D003640 ORTHO05D004439 7.6e-41 172.6 368 34.8
Zm00001eb198460 Zea mays HOM05D003640 ORTHO05D004439 7.6e-41 172.6 327 37.9
CSS0045837 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 9.9e-41 172.2 235 42.6
CDE04G2417 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 1.7e-40 171.4 356 34.6
Sp6g15750 Schrenkiella parvula HOM05D003640 ORTHO05D004439 2.2e-40 171.0 315 40.3
Thhalv10012857m.g Eutrema salsugineum HOM05D003640 ORTHO05D004439 2.9e-40 170.6 325 41.8
SHI02298 Sapria himalayana HOM05D003640 ORTHO05D004439 3.8e-40 170.2 353 38.5
Gorai.008G265800 Gossypium raimondii HOM05D003640 ORTHO05D004439 6.4e-40 169.5 362 38.1
CiPaw.05G202900 Carya illinoinensis HOM05D003640 ORTHO05D004439 8.4e-40 169.1 269 44.2
Gohir.A08G103800 Gossypium hirsutum HOM05D003640 ORTHO05D004439 8.4e-40 169.1 359 36.2
AUR62035604 Chenopodium quinoa HOM05D003640 ORTHO05D004439 1.9e-39 167.9 344 37.2
Duzib068G1167 Durio zibethinus HOM05D003640 ORTHO05D004439 1.9e-39 167.9 361 34.1
Gohir.A12G247000 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.9e-39 167.9 362 37.8
Duzib205G1657 Durio zibethinus HOM05D003640 ORTHO05D004439 2.4e-39 167.5 338 36.4
Gohir.D12G247700 Gossypium hirsutum HOM05D003640 ORTHO05D004439 2.4e-39 167.5 362 37.6
CAN.G358.147 Capsicum annuum HOM05D003640 ORTHO05D004439 4.2e-39 166.8 299 37.8
C03p17530 Brassica napus HOM05D003640 ORTHO05D004439 9.3e-39 165.6 258 46.1
BolC3t14166H Brassica oleracea HOM05D003640 ORTHO05D004439 9.3e-39 165.6 258 46.1
Oeu061023.1 Olea europaea HOM05D003640 ORTHO05D004439 1.6e-38 164.9 346 37.3
SGA_v2.0_scaffold136G35055 Striga asiatica HOM05D003640 ORTHO05D004439 4.6e-38 163.3 363 38.3
Gohir.D09G181300 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.0e-37 162.2 370 33.5
Hma1.2p1_0094F.1_g047240 Hydrangea macrophylla HOM05D003640 ORTHO05D004439 3.0e-37 160.6 377 35.8
BcaB01g04251 Brassica carinata HOM05D003640 ORTHO05D004439 3.9e-37 160.2 331 40.5
Sc19g0000670 Simmondsia chinensis HOM05D003640 ORTHO05D004439 1.1e-36 158.7 186 46.8
SalBow2G2490 Salvia bowleyana HOM05D003640 ORTHO05D004439 1.9e-36 157.9 347 34.6
A03p15040 Brassica napus HOM05D003640 ORTHO05D004439 4.3e-36 156.8 257 46.3
BraA03t10798Z Brassica rapa HOM05D003640 ORTHO05D004439 4.3e-36 156.8 257 46.3
BcaB05g22060 Brassica carinata HOM05D003640 ORTHO05D004439 4.0e-34 150.2 313 40.3
Sp6g15760 Schrenkiella parvula HOM05D003640 ORTHO05D004439 5.3e-34 149.8 162 50.6
Carub.0008s1383 Capsella rubella HOM05D003640 ORTHO05D004439 9.0e-34 149.1 354 33.1
BcaC01g06262 Brassica carinata HOM05D003640 ORTHO05D004439 2.6e-33 147.5 234 46.2
Cpa.g.sc3.144 Carica papaya HOM05D003640 ORTHO05D004439 1.6e-30 138.3 179 47.5
Gorai.006G203300 Gossypium raimondii HOM05D003640 ORTHO05D004439 1.6e-30 138.3 370 33.0
Sopen03g022220 Solanum pennellii HOM05D003640 ORTHO05D004439 1.6e-27 128.3 229 40.6
BcaB01g04247 Brassica carinata HOM05D003640 ORTHO05D004439 1.1e-26 125.6 306 39.2
C09p43570 Brassica napus HOM05D003640 ORTHO05D004439 2.6e-25 120.9 224 35.7
Lj1C1026T8 Lonicera japonica HOM05D003640 ORTHO05D004439 3.4e-25 120.6 191 44.0
Ah.07g204850 Amaranthus hybridus HOM05D003640 ORTHO05D004439 1.1e-20 105.5 338 32.5
PSO782G5739 Papaver somniferum HOM05D003640 ORTHO05D004439 7.6e-17 92.8 151 35.8
RcHm_v2.0_Chr1g0382631 Rosa chinensis HOM05D003640 ORTHO05D004439 9.3e-15 85.9 218 33.9
unitig_37.g11993 Utricularia gibba HOM05D003640 ORTHO05D004439 5.1e-13 80.1 160 32.5
CDE07G0792 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 1.1e-12 79.0 288 23.6
HanXRQChr03g0061701 Helianthus annuus HOM05D003640 ORTHO05D004439 8.4e-08 62.8 184 28.3
SEGI_40237 Sequoiadendron giganteum HOM05D009602 ORTHO05D011210 1.1e-07 62.4 39 82.1
HanXRQChr15g0479781 Helianthus annuus HOM05D003640 ORTHO05D004439 4.2e-07 60.5 98 34.7
HanXRQChr06g0170111 Helianthus annuus HOM05D003640 ORTHO05D004439 7.2e-07 59.7 110 32.7


User provided reference genes

Program Settings