Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36108 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.2e-274 948.3 472 100.0
SEGI_24391 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 9.7e-166 587.4 450 72.4
TAR383G1047 Trochodendron aralioides HOM05D003881 ORTHO05D004343 1.6e-131 473.8 450 58.7
TAR383G0903 Trochodendron aralioides HOM05D003881 ORTHO05D004343 2.0e-131 473.4 450 58.7
CDE06G1176 Ceratophyllum demersum HOM05D003881 ORTHO05D004343 5.9e-131 471.9 450 58.4
Dinv42377 Davidia involucrata HOM05D003881 ORTHO05D004343 1.9e-129 466.8 450 58.0
Nn8g38678 Nelumbo nucifera HOM05D003881 ORTHO05D004343 2.5e-129 466.5 450 58.0
Aqoxy5G02361 Aquilegia oxysepala HOM05D003881 ORTHO05D004343 3.3e-129 466.1 450 58.4
Solyc07g041510.3 Solanum lycopersicum HOM05D003881 ORTHO05D004343 8.0e-128 461.5 450 58.0
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 8.0e-128 461.5 450 58.0
CSS0040077 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 4.0e-127 459.1 472 56.1
Ciclev10007295m.g Citrus clementina HOM05D003881 ORTHO05D004343 1.2e-126 457.6 450 56.4
CAN.G457.4 Capsicum annuum HOM05D003881 ORTHO05D004343 2.6e-126 456.4 450 57.3
HanXRQChr12g0354081 Helianthus annuus HOM05D003881 ORTHO05D004343 4.4e-126 455.7 450 57.1
MELO3C015512.2 Cucumis melo HOM05D003881 ORTHO05D004343 5.7e-126 455.3 470 55.1
Sc14g0000600 Simmondsia chinensis HOM05D003881 ORTHO05D004343 5.7e-126 455.3 450 56.4
CsaV3_1G040850 Cucumis sativus L. HOM05D003881 ORTHO05D004343 7.5e-126 454.9 470 55.1
PSO135G0960 Papaver somniferum HOM05D003881 ORTHO05D004343 7.5e-126 454.9 451 56.3
MBI19_g11836_MAGBIO Magnolia biondii HOM05D003881 ORTHO05D004343 9.8e-126 454.5 450 57.8
Lj7A685T51 Lonicera japonica HOM05D003881 ORTHO05D004343 1.3e-125 454.1 450 56.7
Hund26018 Selenicereus undatus HOM05D003881 ORTHO05D004343 2.8e-125 453.0 450 56.4
CANSAT56G1084 Cannabis sativa HOM05D003881 ORTHO05D004343 3.7e-125 452.6 450 56.7
Rhsim01G0044300 Rhododendron simsii HOM05D003881 ORTHO05D004343 4.9e-125 452.2 416 59.6
Rhsim03G0228800 Rhododendron simsii HOM05D003881 ORTHO05D004343 6.3e-125 451.8 450 56.9
Sed0009854 Sechium edule HOM05D003881 ORTHO05D004343 6.3e-125 451.8 470 54.5
COL.COLO4_18111 Corchorus olitorius HOM05D003881 ORTHO05D004343 1.1e-124 451.1 450 55.3
PSO724G0120 Papaver somniferum HOM05D003881 ORTHO05D004343 1.4e-124 450.7 451 55.9
Eucgr.C00824 Eucalyptus grandis HOM05D003881 ORTHO05D004343 4.1e-124 449.1 450 55.6
Duzib168G2095 Durio zibethinus HOM05D003881 ORTHO05D004343 5.4e-124 448.7 450 54.9
PGR142G3183 Punica granatum HOM05D003881 ORTHO05D004343 5.4e-124 448.7 450 55.1
Glyma.09G068600 Glycine max HOM05D003881 ORTHO05D004343 7.0e-124 448.4 450 55.8
Gorai.001G015300 Gossypium raimondii HOM05D003881 ORTHO05D004343 7.0e-124 448.4 450 54.4
Thecc.09G079000 Theobroma cacao HOM05D003881 ORTHO05D004343 9.2e-124 448.0 450 55.3
Duzib150G0508 Durio zibethinus HOM05D003881 ORTHO05D004343 2.7e-123 446.4 450 54.9
Gohir.A07G014800 Gossypium hirsutum HOM05D003881 ORTHO05D004343 2.7e-123 446.4 450 54.2
Gohir.D07G014500 Gossypium hirsutum HOM05D003881 ORTHO05D004343 2.7e-123 446.4 450 54.2
Glyma.15G176400 Glycine max HOM05D003881 ORTHO05D004343 3.5e-123 446.0 450 55.6
MSTRG.26461 Avicennia marina HOM05D003881 ORTHO05D004343 4.5e-123 445.7 471 54.1
AUR62025189 Chenopodium quinoa HOM05D003881 ORTHO05D004343 4.5e-123 445.7 450 55.1
AUR62028984 Chenopodium quinoa HOM05D003881 ORTHO05D004343 4.5e-123 445.7 450 55.1
Medtr2g041420 Medicago truncatula HOM05D003881 ORTHO05D004343 1.0e-122 444.5 450 55.6
Peaxi162Scf00127g00019 Petunia axillaris HOM05D003881 ORTHO05D004343 1.3e-122 444.1 404 62.1
CiPaw.03G207700 Carya illinoinensis HOM05D003881 ORTHO05D004343 1.7e-122 443.7 450 55.6
Prupe.7G201100 Prunus persica HOM05D003881 ORTHO05D004343 2.3e-122 443.4 450 55.1
Ca_26333_v3 Cicer arietinum L. HOM05D003881 ORTHO05D004343 2.9e-122 443.0 450 55.1
ECA232G2980 Erigeron canadensis HOM05D003881 ORTHO05D004343 2.9e-122 443.0 450 55.3
Manes.16G096500 Manihot esculenta HOM05D003881 ORTHO05D004343 2.9e-122 443.0 450 55.6
Phvul.009G228100 Phaseolus vulgaris HOM05D003881 ORTHO05D004343 5.0e-122 442.2 450 55.3
Psat1g133400 Pisum sativum HOM05D003881 ORTHO05D004343 6.6e-122 441.8 450 54.9
Lj6g0005202 Lotus japonicus HOM05D003881 ORTHO05D004343 2.5e-121 439.9 450 54.4
Ah.14g084990 Amaranthus hybridus HOM05D003881 ORTHO05D004343 3.3e-121 439.5 432 56.2
FAN19G1850 Fragaria x ananassa HOM05D003881 ORTHO05D004343 3.3e-121 439.5 450 55.1
FAN26G0375 Fragaria x ananassa HOM05D003881 ORTHO05D004343 3.3e-121 439.5 450 55.1
Rhsim01G0044500 Rhododendron simsii HOM05D003881 ORTHO05D004343 3.3e-121 439.5 470 54.3
Lalb_Chr11g0074291 Lupinus albus HOM05D003881 ORTHO05D004343 4.3e-121 439.1 450 54.7
Dinv25567 Davidia involucrata HOM05D003881 ORTHO05D004343 1.6e-120 437.2 451 54.8
arahy.Tifrunner.gnm1.ann1.3W29E4 Arachis hypogaea HOM05D003881 ORTHO05D004343 2.8e-120 436.4 466 53.6
EL10Ac8g19107 Beta vulgaris HOM05D003881 ORTHO05D004343 6.1e-120 435.3 462 52.8
arahy.Tifrunner.gnm1.ann1.13CNWC Arachis hypogaea HOM05D003881 ORTHO05D004343 1.0e-119 434.5 450 54.7
FvH4_1g08430 Fragaria vesca HOM05D003881 ORTHO05D004343 1.4e-119 434.1 451 54.1
THA.LOC104815327 Tarenaya hassleriana HOM05D003881 ORTHO05D004343 1.4e-119 434.1 471 52.2
DCAR_031930 Daucus carota HOM05D003881 ORTHO05D004343 1.8e-119 433.7 464 53.2
FAN28G2111 Fragaria x ananassa HOM05D003881 ORTHO05D004343 3.0e-119 433.0 451 53.9
ATR0598G033 Amborella trichopoda HOM05D003881 ORTHO05D004343 4.0e-119 432.6 450 55.8
Lsat_1_v5_gn_5_141221 Lactuca sativa HOM05D003881 ORTHO05D004343 4.0e-119 432.6 478 53.1
vmacro06329 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 4.0e-119 432.6 474 52.7
SGA_v2.0_scaffold21G09481 Striga asiatica HOM05D003881 ORTHO05D004343 6.8e-119 431.8 463 53.8
Actinidia29923 Actinidia chinensis HOM05D003881 ORTHO05D004343 1.5e-118 430.6 453 55.2
ClCG03G015190 Citrullus lanatus HOM05D003881 ORTHO05D004343 1.5e-118 430.6 498 51.4
Atru.chr7.1693 Acer truncatum HOM05D003881 ORTHO05D004343 2.0e-118 430.3 457 52.5
TWI34G0082 Tripterygium wilfordii HOM05D003881 ORTHO05D004343 2.0e-118 430.3 450 54.2
AL3G43760 Arabidopsis lyrata HOM05D003881 ORTHO05D004343 2.6e-118 429.9 471 52.0
DCAR_024741 Daucus carota HOM05D003881 ORTHO05D004343 5.8e-118 428.7 471 52.7
Sp3g24670 Schrenkiella parvula HOM05D003881 ORTHO05D004343 1.3e-117 427.6 471 51.8
Thhalv10002377m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 8.3e-117 424.9 471 51.6
Carub.0003s2725 Capsella rubella HOM05D003881 ORTHO05D004343 1.4e-116 424.1 471 51.2
GSVIVG01015096001 Vitis vinifera HOM05D003881 ORTHO05D004343 1.4e-116 424.1 450 54.2
BcaB08g34515 Brassica carinata HOM05D003881 ORTHO05D004343 9.2e-116 421.4 471 51.2
C03p55630 Brassica napus HOM05D003881 ORTHO05D004343 1.6e-115 420.6 471 51.6
BolC3t17840H Brassica oleracea HOM05D003881 ORTHO05D004343 1.6e-115 420.6 471 51.6
Potri.006G143300 Populus trichocarpa HOM05D003881 ORTHO05D004343 1.6e-115 420.6 451 53.2
SalBow4G1287 Salvia bowleyana HOM05D003881 ORTHO05D004343 2.0e-115 420.2 416 56.7
FAN26G1433 Fragaria x ananassa HOM05D003881 ORTHO05D004343 3.5e-115 419.5 490 50.6
A03p44780 Brassica napus HOM05D003881 ORTHO05D004343 4.6e-115 419.1 471 51.4
BraA03t13613Z Brassica rapa HOM05D003881 ORTHO05D004343 4.6e-115 419.1 471 51.4
Migut.L01552 Erythranthe guttata HOM05D003881 ORTHO05D004343 6.0e-115 418.7 450 53.1
BcaC01g03143 Brassica carinata HOM05D003881 ORTHO05D004343 5.0e-114 415.6 474 50.6
Sabra06G0113500 Salix brachista HOM05D003881 ORTHO05D004343 1.1e-113 414.5 451 52.5
AagrBONN_evm.TU.Sc2ySwM_344.1648 Anthoceros agrestis HOM05D003881 ORTHO05D004343 2.5e-113 413.3 450 50.0
Sabra06G0112200 Salix brachista HOM05D003881 ORTHO05D004343 2.5e-113 413.3 451 52.3
SMO143G0189 Selaginella moellendorffii HOM05D003881 ORTHO05D004343 2.5e-113 413.3 448 52.2
Mapoly0010s0036 Marchantia polymorpha HOM05D003881 ORTHO05D004343 5.6e-113 412.1 450 50.9
Aa31sc133G100 Aethionema arabicum HOM05D003881 ORTHO05D004343 1.8e-111 407.1 504 48.4
Pp3c3_17140 Physcomitrium patens HOM05D003881 ORTHO05D004343 8.3e-109 398.3 450 49.8
Oeu041279.1 Olea europaea HOM05D003881 ORTHO05D004343 6.0e-107 392.1 450 49.8
RcHm_v2.0_Chr2g0094531 Rosa chinensis HOM05D003881 ORTHO05D004343 1.0e-106 391.3 451 50.6
Cfa003017 Carpinus fangiana HOM05D003881 ORTHO05D004343 5.1e-106 389.0 450 50.4
unitig_8.g3529 Utricularia gibba HOM05D003881 ORTHO05D004343 5.1e-106 389.0 401 54.9
Oeu018066.1 Olea europaea HOM05D003881 ORTHO05D004343 9.5e-105 384.8 507 47.3
QL11p000475 Quercus lobata HOM05D003881 ORTHO05D004343 6.8e-103 378.6 450 49.8
MD02G1088500 Malus domestica HOM05D003881 ORTHO05D004343 2.6e-102 376.7 450 49.1
Nitab4.5_0000343g0070 Nicotiana tabacum HOM05D003881 ORTHO05D004343 2.6e-102 376.7 456 50.0
Cc06_g12030 Coffea canephora HOM05D003881 ORTHO05D004343 1.3e-101 374.4 382 55.5
Nitab4.5_0001488g0030 Nicotiana tabacum HOM05D003881 ORTHO05D004343 7.1e-100 368.6 403 53.1
TPR.G28668 Trifolium pratense HOM05D003881 ORTHO05D004343 9.2e-100 368.2 407 50.4
Zm00001eb073540 Zea mays HOM05D003881 ORTHO05D004343 2.1e-99 367.1 460 47.6
Haze_25994 Corylus avellana HOM05D003881 ORTHO05D004343 1.0e-98 364.8 478 47.1
Os07g0476200 Oryza sativa ssp. japonica HOM05D003881 ORTHO05D004343 8.6e-98 361.7 395 52.9
Cpa.g.sc28.63 Carica papaya HOM05D003881 ORTHO05D004343 2.4e-95 353.6 451 48.1
Haze_25986 Corylus avellana HOM05D003881 ORTHO05D004343 5.8e-86 322.4 478 43.9
CARHR103810 Cardamine hirsuta HOM05D003881 ORTHO05D004343 1.5e-70 271.2 318 50.3
HPP92_007226 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.0e-66 258.5 314 47.5
CBR_g74629 Chara braunii HOM05D003881 ORTHO05D004343 2.8e-56 223.8 278 43.9
QL10p021459 Quercus lobata HOM05D000176 ORTHO05D000106 2.0e-46 191.0 132 68.9
ATR0193G031 Amborella trichopoda HOM05D003881 ORTHO05D004343 2.9e-37 160.6 108 71.3
CARHR103800 Cardamine hirsuta HOM05D003881 ORTHO05D004343 1.2e-35 155.2 153 52.9
SEGI_31283 Sequoiadendron giganteum HOM05D051493 ORTHO05D385466 2.1e-35 154.5 114 71.9
SHI23794 Sapria himalayana HOM05D003881 ORTHO05D004343 1.3e-32 145.2 344 32.6
Lsat_1_v5_gn_3_15640 Lactuca sativa HOM05D003881 ORTHO05D004343 8.2e-32 142.5 103 63.1
SEGI_29160 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.0e-30 137.9 96 77.1
ATR0193G014 Amborella trichopoda HOM05D003881 ORTHO05D004343 4.5e-30 136.7 78 87.2
SEGI_35060 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 4.5e-30 136.7 104 71.2
SEGI_15507 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.5e-28 131.0 79 82.3
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 2.3e-26 124.4 313 31.3
QL01p053501 Quercus lobata HOM05D003881 ORTHO05D004343 1.2e-25 122.1 98 63.3
ATR0684G059 Amborella trichopoda HOM05D003881 ORTHO05D004343 2.4e-23 114.4 70 80.0
QL03p010974 Quercus lobata HOM05D003881 ORTHO05D004343 1.5e-20 105.1 133 44.4
SEGI_23032 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 9.4e-20 102.4 68 76.5
SEGI_26438 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 6.1e-19 99.8 59 84.7
HPP92_026934 Vanilla planifolia HOM05D003881 ORTHO05D004343 6.8e-18 96.3 253 29.6
Rhsim03G0229000 Rhododendron simsii HOM05D003881 ORTHO05D004343 4.8e-16 90.1 81 65.4
SEGI_33062 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.8e-15 88.2 139 39.6
Actinidia38472 Actinidia chinensis HOM05D003881 ORTHO05D004343 5.4e-15 86.7 74 56.8
SEGI_25041 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.3e-13 81.3 94 52.1
TPR.G10985 Trifolium pratense HOM05D003881 ORTHO05D004343 4.2e-12 77.0 47 85.1
RcHm_v2.0_Chr5g0007121 Rosa chinensis HOM05D003881 ORTHO05D004343 3.0e-10 70.9 51 66.7
Zm00001eb329800 Zea mays HOM05D003881 ORTHO05D004343 6.8e-10 69.7 214 30.8
Hma1.2p1_0528F.1_g173040 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 1.5e-09 68.6 97 46.4
Hma1.2p1_0980F.1_g243635 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 1.5e-09 68.6 97 46.4
Hma1.2p1_1385F.1_g279633 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 1.5e-09 68.6 97 46.4
MCO14G023 Micromonas commoda HOM05D003881 ORTHO05D004343 1.5e-09 68.6 100 36.0
Pp3c7_11900 Physcomitrium patens HOM05D005010 ORTHO05D006065 3.7e-08 63.9 63 47.6
ATR0193G048 Amborella trichopoda HOM05D003881 ORTHO05D004343 8.3e-08 62.8 50 64.0
Hma1.2p1_0508F.1_g168780 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 2.7e-06 57.8 67 52.2


User provided reference genes

Program Settings