Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36069 Sequoiadendron giganteum HOM05D005085 ORTHO05D006135 0.0e+00 1303.5 636 100.0
AagrBONN_evm.TU.Sc2ySwM_368.3337 Anthoceros agrestis HOM05D005085 ORTHO05D006135 6.5e-133 478.8 386 60.4
Mapoly0005s0073 Marchantia polymorpha HOM05D005085 ORTHO05D006135 2.7e-131 473.4 382 60.2
TAR375G0122 Trochodendron aralioides HOM05D005085 ORTHO05D006135 1.3e-128 464.5 384 58.9
SEGI_29845 Sequoiadendron giganteum HOM05D005085 ORTHO05D006135 1.7e-128 464.2 388 58.2
SEGI_15573 Sequoiadendron giganteum HOM05D005085 ORTHO05D006135 1.1e-127 461.5 384 58.3
SEGI_31502 Sequoiadendron giganteum HOM05D005085 ORTHO05D006135 1.4e-127 461.1 381 58.8
Dinv35331 Davidia involucrata HOM05D005085 ORTHO05D006135 5.9e-126 455.7 383 58.7
TAR629G3137 Trochodendron aralioides HOM05D005085 ORTHO05D006135 1.3e-125 454.5 384 57.6
Actinidia08648 Actinidia chinensis HOM05D005085 ORTHO05D006135 2.9e-125 453.4 382 57.1
MBI06_g46249_MAGBIO Magnolia biondii HOM05D005085 ORTHO05D006135 8.5e-125 451.8 383 57.7
Nn1g00241 Nelumbo nucifera HOM05D005085 ORTHO05D006135 4.2e-124 449.5 383 56.9
CSS0032106 Camellia sinensis var. sinensis HOM05D005085 ORTHO05D006135 1.2e-123 448.0 382 57.6
vmacro06534 Vaccinium macrocarpon HOM05D005085 ORTHO05D006135 2.8e-123 446.8 384 56.5
SalBow4G0231 Salvia bowleyana HOM05D005085 ORTHO05D006135 1.4e-122 444.5 381 56.2
Actinidia34217 Actinidia chinensis HOM05D005085 ORTHO05D006135 1.8e-122 444.1 382 56.0
SMO334G0022 Selaginella moellendorffii HOM05D005085 ORTHO05D006135 3.0e-122 443.4 382 58.4
Haze_00215 Corylus avellana HOM05D005085 ORTHO05D006135 4.0e-122 443.0 382 55.5
Ciclev10018947m.g Citrus clementina HOM05D005085 ORTHO05D006135 5.2e-122 442.6 381 55.6
Nitab4.5_0005599g0010 Nicotiana tabacum HOM05D005085 ORTHO05D006135 6.8e-122 442.2 381 55.4
Cfa016227 Carpinus fangiana HOM05D005085 ORTHO05D006135 1.2e-121 441.4 382 55.5
GSVIVG01038548001 Vitis vinifera HOM05D005085 ORTHO05D006135 1.2e-121 441.4 413 54.0
CSS0012677 Camellia sinensis var. sinensis HOM05D005085 ORTHO05D006135 1.3e-120 438.0 383 56.1
CiPaw.05G196500 Carya illinoinensis HOM05D005085 ORTHO05D006135 1.3e-120 438.0 382 56.3
Migut.F01031 Erythranthe guttata HOM05D005085 ORTHO05D006135 1.3e-120 438.0 382 55.2
Nitab4.5_0010146g0010 Nicotiana tabacum HOM05D005085 ORTHO05D006135 2.2e-120 437.2 381 54.6
PSO135G0649 Papaver somniferum HOM05D005085 ORTHO05D006135 2.2e-120 437.2 382 55.8
Rhsim03G0208500 Rhododendron simsii HOM05D005085 ORTHO05D006135 2.2e-120 437.2 383 56.1
PGSC0003DMG400009126 Solanum tuberosum HOM05D005085 ORTHO05D006135 2.2e-120 437.2 382 55.0
Peaxi162Scf00717g00321 Petunia axillaris HOM05D005085 ORTHO05D006135 3.7e-120 436.4 383 55.1
ATR0602G298 Amborella trichopoda HOM05D005085 ORTHO05D006135 4.9e-120 436.0 383 55.9
Nn3g18991 Nelumbo nucifera HOM05D005085 ORTHO05D006135 4.9e-120 436.0 383 55.4
Oeu037073.1 Olea europaea HOM05D005085 ORTHO05D006135 6.3e-120 435.6 381 54.3
Psat5g078640 Pisum sativum HOM05D005085 ORTHO05D006135 8.3e-120 435.3 381 55.4
Cc02_g01600 Coffea canephora HOM05D005085 ORTHO05D006135 1.1e-119 434.9 381 54.6
Hma1.2p1_0404F.1_g145430 Hydrangea macrophylla HOM05D005085 ORTHO05D006135 1.4e-119 434.5 383 56.1
Aqoxy7G00083 Aquilegia oxysepala HOM05D005085 ORTHO05D006135 1.8e-119 434.1 383 56.9
EL10Ac3g05287 Beta vulgaris HOM05D005085 ORTHO05D006135 1.8e-119 434.1 381 54.3
Sopen03g023080 Solanum pennellii HOM05D005085 ORTHO05D006135 2.4e-119 433.7 382 54.7
PGR142G4232 Punica granatum HOM05D005085 ORTHO05D006135 3.1e-119 433.3 382 55.5
MSTRG.27029 Avicennia marina HOM05D005085 ORTHO05D006135 4.1e-119 433.0 381 54.3
Os02g0290600 Oryza sativa ssp. japonica HOM05D005085 ORTHO05D006135 4.1e-119 433.0 382 53.9
Ah.07g205630 Amaranthus hybridus HOM05D005085 ORTHO05D006135 7.0e-119 432.2 380 54.5
FAN06G4927 Fragaria x ananassa HOM05D005085 ORTHO05D006135 7.0e-119 432.2 382 54.5
PSO384G0679 Papaver somniferum HOM05D005085 ORTHO05D006135 7.0e-119 432.2 382 55.5
Solyc03g083330.3 Solanum lycopersicum HOM05D005085 ORTHO05D006135 1.2e-118 431.4 382 54.5
FAN01G1488 Fragaria x ananassa HOM05D005085 ORTHO05D006135 1.6e-118 431.0 382 54.2
CAN.G968.3 Capsicum annuum HOM05D005085 ORTHO05D006135 2.0e-118 430.6 382 54.5
FvH4_7g31630 Fragaria vesca HOM05D005085 ORTHO05D006135 2.0e-118 430.6 382 54.2
FAN06G1404 Fragaria x ananassa HOM05D005085 ORTHO05D006135 2.0e-118 430.6 382 54.2
Eucgr.K00374 Eucalyptus grandis HOM05D005085 ORTHO05D006135 3.5e-118 429.9 382 54.2
Migut.F00216 Erythranthe guttata HOM05D005085 ORTHO05D006135 4.5e-118 429.5 381 53.3
Duzib205G0228 Durio zibethinus HOM05D005085 ORTHO05D006135 7.8e-118 428.7 381 54.9
Lj1g0017393 Lotus japonicus HOM05D005085 ORTHO05D006135 7.8e-118 428.7 382 54.5
CDE04G2343 Ceratophyllum demersum HOM05D005085 ORTHO05D006135 1.0e-117 428.3 382 54.5
Lju170A22T15 Lonicera japonica HOM05D005085 ORTHO05D006135 1.3e-117 427.9 382 54.7
Medtr3g091420 Medicago truncatula HOM05D005085 ORTHO05D006135 1.3e-117 427.9 382 53.9
VMungo1309G2271 Vigna mungo HOM05D005085 ORTHO05D006135 1.7e-117 427.6 381 54.1
Zm00001eb237090 Zea mays HOM05D005085 ORTHO05D006135 1.7e-117 427.6 382 53.4
Lalb_Chr08g0240261 Lupinus albus HOM05D005085 ORTHO05D006135 2.9e-117 426.8 381 54.3
CANSAT21G1132 Cannabis sativa HOM05D005085 ORTHO05D006135 3.8e-117 426.4 382 54.7
COL.COLO4_16758 Corchorus olitorius HOM05D005085 ORTHO05D006135 3.8e-117 426.4 381 54.6
FAN03G3191 Fragaria x ananassa HOM05D005085 ORTHO05D006135 3.8e-117 426.4 382 53.9
Ca_16704_v3 Cicer arietinum L. HOM05D005085 ORTHO05D006135 5.0e-117 426.0 413 51.3
Pp3c3_30620 Physcomitrium patens HOM05D005085 ORTHO05D006135 5.0e-117 426.0 387 57.1
Thecc.03G198500 Theobroma cacao HOM05D005085 ORTHO05D006135 5.0e-117 426.0 381 55.1
Glyma.04G236000 Glycine max HOM05D005085 ORTHO05D006135 6.6e-117 425.6 382 54.2
QL09p009347 Quercus lobata HOM05D005085 ORTHO05D006135 8.6e-117 425.2 382 54.5
Sed0021974 Sechium edule HOM05D005085 ORTHO05D006135 8.6e-117 425.2 381 55.1
Glyma.06G128600 Glycine max HOM05D005085 ORTHO05D006135 1.1e-116 424.9 382 53.9
MD07G1288900 Malus domestica HOM05D005085 ORTHO05D006135 2.5e-116 423.7 382 53.4
arahy.Tifrunner.gnm1.ann1.ZR5QI2 Arachis hypogaea HOM05D005085 ORTHO05D006135 3.3e-116 423.3 382 54.5
AUR62006093 Chenopodium quinoa HOM05D005085 ORTHO05D006135 3.3e-116 423.3 381 53.8
HanXRQChr04g0100521 Helianthus annuus HOM05D005085 ORTHO05D006135 3.3e-116 423.3 377 53.3
Oeu060984.1 Olea europaea HOM05D005085 ORTHO05D006135 4.3e-116 422.9 381 53.3
arahy.Tifrunner.gnm1.ann1.T9I2S7 Arachis hypogaea HOM05D005085 ORTHO05D006135 9.5e-116 421.8 382 54.2
Potri.012G014900 Populus trichocarpa HOM05D005085 ORTHO05D006135 9.5e-116 421.8 382 54.7
Potri.015G013400 Populus trichocarpa HOM05D005085 ORTHO05D006135 9.5e-116 421.8 382 54.2
RcHm_v2.0_Chr1g0380701 Rosa chinensis HOM05D005085 ORTHO05D006135 9.5e-116 421.8 382 53.1
Manes.02G143100 Manihot esculenta HOM05D005085 ORTHO05D006135 1.6e-115 421.0 382 54.2
Oeu060983.2 Olea europaea HOM05D005085 ORTHO05D006135 1.6e-115 421.0 379 53.3
Sabra15G0010900 Salix brachista HOM05D005085 ORTHO05D006135 1.6e-115 421.0 382 54.5
CsaV3_5G000500 Cucumis sativus L. HOM05D005085 ORTHO05D006135 2.1e-115 420.6 381 54.9
Pp3c8_9480 Physcomitrium patens HOM05D005085 ORTHO05D006135 2.8e-115 420.2 385 56.6
Atru.chr12.2188 Acer truncatum HOM05D005085 ORTHO05D006135 6.1e-115 419.1 381 53.8
MELO3C005886.2 Cucumis melo HOM05D005085 ORTHO05D006135 1.0e-114 418.3 381 54.6
TWI23G0498 Tripterygium wilfordii HOM05D005085 ORTHO05D006135 1.0e-114 418.3 382 53.9
Gohir.D04G001366 Gossypium hirsutum HOM05D005085 ORTHO05D006135 1.8e-114 417.5 381 53.5
Prupe.2G310400 Prunus persica HOM05D005085 ORTHO05D006135 4.0e-114 416.4 382 53.9
Phvul.009G052800 Phaseolus vulgaris HOM05D005085 ORTHO05D006135 8.9e-114 415.2 381 53.0
SGA_v2.0_scaffold192G40551 Striga asiatica HOM05D005085 ORTHO05D006135 1.5e-113 414.5 385 53.0
TPR.G19373 Trifolium pratense HOM05D005085 ORTHO05D006135 2.0e-113 414.1 371 53.9
Lsat_1_v5_gn_2_136081 Lactuca sativa HOM05D005085 ORTHO05D006135 4.4e-113 412.9 378 53.7
Sc19g0000870 Simmondsia chinensis HOM05D005085 ORTHO05D006135 5.7e-113 412.5 382 53.4
Hund11663 Selenicereus undatus HOM05D005085 ORTHO05D006135 9.8e-113 411.8 383 52.5
AUR62019399 Chenopodium quinoa HOM05D005085 ORTHO05D006135 2.9e-112 410.2 371 53.4
Thhalv10003701m.g Eutrema salsugineum HOM05D005085 ORTHO05D006135 1.8e-111 407.5 380 54.5
DCAR_008919 Daucus carota HOM05D005085 ORTHO05D006135 5.4e-111 406.0 383 52.0
THA.LOC104814927 Tarenaya hassleriana HOM05D005085 ORTHO05D006135 9.2e-111 405.2 404 51.0
Carub.0006s2201 Capsella rubella HOM05D005085 ORTHO05D006135 4.6e-110 402.9 384 53.9
Aa31LG11G3490 Aethionema arabicum HOM05D005085 ORTHO05D006135 5.9e-110 402.5 383 52.7
BcaB04g19831 Brassica carinata HOM05D005085 ORTHO05D006135 1.3e-109 401.4 378 54.2
Duzib068G1071 Durio zibethinus HOM05D005085 ORTHO05D006135 3.9e-109 399.8 371 53.6
A09p06550 Brassica napus HOM05D005085 ORTHO05D006135 5.0e-109 399.4 377 53.3
Sp2g23110 Schrenkiella parvula HOM05D005085 ORTHO05D006135 6.6e-109 399.1 384 53.6
Manes.01G183000 Manihot esculenta HOM05D005085 ORTHO05D006135 1.5e-108 397.9 382 52.6
BcaC04g23536 Brassica carinata HOM05D005085 ORTHO05D006135 1.9e-108 397.5 377 53.1
BolC9t53643H Brassica oleracea HOM05D005085 ORTHO05D006135 1.9e-108 397.5 377 53.1
C09p07310 Brassica napus HOM05D005085 ORTHO05D006135 4.3e-108 396.4 377 53.1
BraA09t36300Z Brassica rapa HOM05D005085 ORTHO05D006135 7.3e-108 395.6 377 53.1
Gohir.1Z049319 Gossypium hirsutum HOM05D005085 ORTHO05D006135 7.3e-108 395.6 381 51.7
CARHR189270 Cardamine hirsuta HOM05D005085 ORTHO05D006135 1.2e-107 394.8 383 53.3
AL6G35670 Arabidopsis lyrata HOM05D005085 ORTHO05D006135 1.6e-107 394.4 384 52.9
Cpa.g.sc3.82 Carica papaya HOM05D005085 ORTHO05D006135 1.6e-107 394.4 382 51.8
AT5G24260 Arabidopsis thaliana HOM05D005085 ORTHO05D006135 2.1e-107 394.0 384 52.9
Gorai.012G002400 Gossypium raimondii HOM05D005085 ORTHO05D006135 2.1e-107 394.0 369 52.3
Sabra12G0017000 Salix brachista HOM05D005085 ORTHO05D006135 3.6e-107 393.3 382 52.1
Gohir.A05G414800 Gossypium hirsutum HOM05D005085 ORTHO05D006135 4.7e-107 392.9 381 51.4
Sed0008428 Sechium edule HOM05D005085 ORTHO05D006135 3.1e-106 390.2 381 52.5
CBR_g26168 Chara braunii HOM05D005085 ORTHO05D006135 7.5e-105 385.6 381 52.0
ClCG01G000430 Citrullus lanatus HOM05D005085 ORTHO05D006135 3.0e-101 373.6 411 47.9
FAN10G0692 Fragaria x ananassa HOM05D005085 ORTHO05D006135 3.9e-101 373.2 384 48.7
FAN10G4178 Fragaria x ananassa HOM05D005085 ORTHO05D006135 3.9e-101 373.2 384 48.7
ECA238G3029 Erigeron canadensis HOM05D005085 ORTHO05D006135 4.3e-100 369.8 376 50.3
HPP92_002922 Vanilla planifolia HOM05D005085 ORTHO05D006135 2.3e-90 337.4 382 47.1
PRCOL_00001990 Prasinoderma coloniale HOM05D005085 ORTHO05D006135 6.0e-78 296.2 426 40.6
MBI06_g41630_MAGBIO Magnolia biondii HOM05D005085 ORTHO05D006135 1.6e-70 271.6 385 41.0
SEGI_01020 Sequoiadendron giganteum HOM05D001439 ORTHO05D017116 1.1e-63 248.8 219 51.1
SEGI_16610 Sequoiadendron giganteum HOM05D001439 ORTHO05D017116 3.0e-61 240.7 220 50.5
MCO02G195 Micromonas commoda HOM05D005085 ORTHO05D006135 4.3e-52 210.3 417 33.8
SEGI_28384 Sequoiadendron giganteum HOM05D001439 ORTHO05D017116 1.7e-48 198.4 118 82.2
SEGI_35780 Sequoiadendron giganteum HOM05D002947 ORTHO05D003447 1.4e-42 178.7 163 51.5
SEGI_32205 Sequoiadendron giganteum HOM05D001876 ORTHO05D017116 5.5e-39 166.8 218 37.6
SEGI_33873 Sequoiadendron giganteum HOM05D005023 ORTHO05D006009 5.9e-33 146.7 128 51.6
SEGI_14643 Sequoiadendron giganteum HOM05D003509 ORTHO05D004205 1.1e-31 142.5 135 45.9
SEGI_05359 Sequoiadendron giganteum HOM05D003193 ORTHO05D017116 5.5e-31 140.2 115 52.2
SEGI_40801 Sequoiadendron giganteum HOM05D003314 ORTHO05D000285 3.9e-29 134.0 130 56.2
Lj1A1019T47 Lonicera japonica HOM05D005085 ORTHO05D006135 1.3e-27 129.0 117 56.4
SEGI_15159 Sequoiadendron giganteum HOM05D004343 ORTHO05D005695 7.7e-25 119.8 106 49.1
SEGI_35559 Sequoiadendron giganteum HOM05D000725 ORTHO05D002005 1.3e-24 119.0 224 32.6
SEGI_19944 Sequoiadendron giganteum HOM05D001439 ORTHO05D000285 9.4e-23 112.8 219 38.8
SEGI_20183 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 1.6e-22 112.1 108 45.4
SEGI_39705 Sequoiadendron giganteum HOM05D005583 ORTHO05D006507 2.1e-22 111.7 95 54.7
SEGI_31457 Sequoiadendron giganteum HOM05D010022 ORTHO05D037593 8.0e-22 109.8 212 30.2
Lj1C1017G3 Lonicera japonica HOM05D005085 ORTHO05D006135 1.2e-20 105.9 111 49.5
SEGI_00389 Sequoiadendron giganteum HOM05D000121 ORTHO05D012651 1.8e-18 98.6 92 47.8
SEGI_34208 Sequoiadendron giganteum HOM05D001090 ORTHO05D002687 2.4e-18 98.2 218 26.6
SEGI_21273 Sequoiadendron giganteum HOM05D009239 ORTHO05D000002 7.0e-18 96.7 86 51.2
SEGI_27452 Sequoiadendron giganteum HOM05D004028 ORTHO05D004844 1.6e-17 95.5 219 25.1
SEGI_22155 Sequoiadendron giganteum HOM05D000644 ORTHO05D000504 1.0e-16 92.8 74 55.4
SEGI_30748 Sequoiadendron giganteum HOM05D003193 ORTHO05D017116 1.6e-14 85.5 147 30.6
SEGI_01816 Sequoiadendron giganteum HOM05D007987 ORTHO05D010121 2.1e-14 85.1 61 63.9
SEGI_38092 Sequoiadendron giganteum HOM05D000166 ORTHO05D001348 1.0e-13 82.8 95 38.9
SEGI_23823 Sequoiadendron giganteum HOM05D007170 ORTHO05D009243 1.8e-13 82.0 104 41.3
SEGI_33305 Sequoiadendron giganteum HOM05D003118 ORTHO05D003618 8.8e-13 79.7 132 38.6
SEGI_16908 Sequoiadendron giganteum HOM05D003193 ORTHO05D017116 2.6e-12 78.2 187 28.3
SEGI_38585 Sequoiadendron giganteum HOM05D000198 ORTHO05D006356 3.4e-12 77.8 70 60.0
Gohir.D10G185350 Gossypium hirsutum HOM05D005085 ORTHO05D006135 5.7e-12 77.0 46 65.2
Gorai.011G207800 Gossypium raimondii HOM05D005085 ORTHO05D006135 5.7e-12 77.0 46 65.2
SEGI_01228 Sequoiadendron giganteum HOM05D013703 ORTHO05D000002 2.2e-11 75.1 70 57.1
SEGI_13942 Sequoiadendron giganteum HOM05D001439 ORTHO05D010121 3.7e-11 74.3 63 55.6
SEGI_39499 Sequoiadendron giganteum HOM05D000367 ORTHO05D016487 1.8e-10 72.0 58 53.4
SEGI_06305 Sequoiadendron giganteum HOM05D003193 ORTHO05D002687 2.4e-10 71.6 131 29.0
SEGI_12592 Sequoiadendron giganteum HOM05D004338 ORTHO05D005205 3.1e-10 71.2 142 30.3
SEGI_22617 Sequoiadendron giganteum HOM05D000804 ORTHO05D005389 4.1e-10 70.9 54 61.1
SEGI_13148 Sequoiadendron giganteum HOM05D001282 ORTHO05D001236 4.5e-09 67.4 46 76.1
Lj1C1016T11 Lonicera japonica HOM05D005085 ORTHO05D006135 1.7e-08 65.5 40 67.5
SEGI_11246 Sequoiadendron giganteum HOM05D000228 ORTHO05D006129 2.3e-08 65.1 80 46.2
SEGI_15111 Sequoiadendron giganteum HOM05D000924 ORTHO05D007614 2.9e-08 64.7 51 60.8
SEGI_15344 Sequoiadendron giganteum HOM05D001938 ORTHO05D001965 3.8e-08 64.3 112 34.8
SEGI_12643 Sequoiadendron giganteum HOM05D018676 ORTHO05D017321 5.0e-08 63.9 130 29.2
SEGI_24789 Sequoiadendron giganteum HOM05D002312 ORTHO05D007981 6.5e-08 63.5 49 63.3
SEGI_26090 Sequoiadendron giganteum HOM05D001936 ORTHO05D002296 1.1e-07 62.8 44 61.4
SEGI_09942 Sequoiadendron giganteum HOM05D000938 ORTHO05D001451 3.3e-07 61.2 264 20.1
BcaB04g18355 Brassica carinata HOM05D005085 ORTHO05D006135 5.5e-07 60.5 39 59.0
SEGI_07109 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 9.5e-07 59.7 69 47.8
SEGI_22153 Sequoiadendron giganteum HOM05D064569 ORTHO05D007614 6.1e-06 57.0 51 54.9


User provided reference genes

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