Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36064 Sequoiadendron giganteum HOM05D003453 ORTHO05D004154 2.4e-169 599.4 452 100.0
SEGI_15755 Sequoiadendron giganteum HOM05D003453 ORTHO05D004154 7.9e-32 142.5 454 54.0
Aqoxy7G02898 Aquilegia oxysepala HOM05D003453 ORTHO05D004154 6.7e-15 86.3 136 50.0
FAN07G0750 Fragaria x ananassa HOM05D003453 ORTHO05D004154 2.5e-14 84.3 136 70.6
Haze_22047 Corylus avellana HOM05D003453 ORTHO05D004154 3.3e-14 84.0 219 49.8
FAN12G0296 Fragaria x ananassa HOM05D003453 ORTHO05D004154 4.3e-14 83.6 219 42.9
FAN17G0675 Fragaria x ananassa HOM05D003453 ORTHO05D004154 4.3e-14 83.6 219 50.2
FvH4_4g06910 Fragaria vesca HOM05D003453 ORTHO05D004154 5.7e-14 83.2 219 50.7
DCAR_020142 Daucus carota HOM05D003453 ORTHO05D004154 1.7e-13 81.6 136 68.4
FAN22G1784 Fragaria x ananassa HOM05D003453 ORTHO05D004154 4.8e-13 80.1 219 42.0
RcHm_v2.0_Chr4g0398811 Rosa chinensis HOM05D003453 ORTHO05D004154 8.2e-13 79.3 219 49.3
Oeu043899.1 Olea europaea HOM05D003453 ORTHO05D004154 3.1e-12 77.4 136 63.2
PGR044G1644 Punica granatum HOM05D003453 ORTHO05D004154 5.3e-12 76.6 136 64.0
Lju432C7T0 Lonicera japonica HOM05D003453 ORTHO05D004154 9.1e-12 75.9 136 72.8
Lju50A41T23 Lonicera japonica HOM05D003453 ORTHO05D004154 9.1e-12 75.9 136 72.8
Lju50A42T20 Lonicera japonica HOM05D003453 ORTHO05D004154 9.1e-12 75.9 136 72.8
Actinidia38507 Actinidia chinensis HOM05D003453 ORTHO05D004154 1.2e-11 75.5 136 61.8
vmacro22287 Vaccinium macrocarpon HOM05D003453 ORTHO05D004154 1.2e-11 75.5 187 48.1
Nn8g40645 Nelumbo nucifera HOM05D003453 ORTHO05D004154 1.5e-11 75.1 219 38.8
Oeu035455.1 Olea europaea HOM05D003453 ORTHO05D004154 2.6e-11 74.3 136 62.5
C07p54660 Brassica napus HOM05D003453 ORTHO05D004154 7.7e-11 72.8 137 54.0
BolC7t45955H Brassica oleracea HOM05D003453 ORTHO05D004154 7.7e-11 72.8 137 54.0
DCAR_009479 Daucus carota HOM05D003453 ORTHO05D004154 7.7e-11 72.8 149 63.1
Medtr4g127120 Medicago truncatula HOM05D003453 ORTHO05D004154 1.0e-10 72.4 220 45.0
Duzib150G0655 Durio zibethinus HOM05D003453 ORTHO05D004154 2.2e-10 71.2 149 54.4
Oeu044656.1 Olea europaea HOM05D003453 ORTHO05D004154 5.0e-10 70.1 136 62.5
Cc06_g17230 Coffea canephora HOM05D003453 ORTHO05D004154 6.5e-10 69.7 136 55.9
Haze_07582 Corylus avellana HOM05D002488 ORTHO05D002613 6.5e-10 69.7 156 28.8
Migut.J00777 Erythranthe guttata HOM05D003453 ORTHO05D004154 6.5e-10 69.7 140 60.7
HanXRQChr05g0142141 Helianthus annuus HOM05D003453 ORTHO05D004154 6.5e-10 69.7 135 54.8
CSS0013411 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 1.9e-09 68.2 135 59.3
CSS0032765 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 1.9e-09 68.2 135 59.3
Psat4g014280 Pisum sativum HOM05D003453 ORTHO05D004154 2.5e-09 67.8 201 39.8
Nitab4.5_0001793g0070 Nicotiana tabacum HOM05D002488 ORTHO05D002613 3.2e-09 67.4 157 30.6
SGA_v2.0_scaffold31G12781 Striga asiatica HOM05D003453 ORTHO05D004154 3.2e-09 67.4 146 64.4
VMungo1215G2556 Vigna mungo HOM05D003453 ORTHO05D004154 4.2e-09 67.0 162 46.9
Cfa019211 Carpinus fangiana HOM05D002488 ORTHO05D002613 5.5e-09 66.6 144 29.9
Dinv20601 Davidia involucrata HOM05D002488 ORTHO05D002613 5.5e-09 66.6 156 30.1
Nitab4.5_0003703g0050 Nicotiana tabacum HOM05D002488 ORTHO05D002613 5.5e-09 66.6 156 28.2
Atru.chr7.914 Acer truncatum HOM05D003453 ORTHO05D004154 7.2e-09 66.2 160 43.8
COL.COLO4_37566 Corchorus olitorius HOM05D003453 ORTHO05D004154 7.2e-09 66.2 165 43.6
Carub.0004s1475 Capsella rubella HOM05D003453 ORTHO05D004154 9.4e-09 65.9 138 56.5
Lalb_Chr23g0276711 Lupinus albus HOM05D003453 ORTHO05D004154 9.4e-09 65.9 152 38.2
MD13G1241200 Malus domestica HOM05D003453 ORTHO05D004154 9.4e-09 65.9 79 64.6
TPR.G5414 Trifolium pratense HOM05D003453 ORTHO05D004154 9.4e-09 65.9 136 44.9
Ca_02128_v3 Cicer arietinum L. HOM05D003453 ORTHO05D004154 1.2e-08 65.5 79 64.6
Lalb_Chr13g0299841 Lupinus albus HOM05D003453 ORTHO05D004154 1.2e-08 65.5 79 67.1
MD16G1245200 Malus domestica HOM05D003453 ORTHO05D004154 2.1e-08 64.7 79 67.1
Prupe.1G072100 Prunus persica HOM05D003453 ORTHO05D004154 2.1e-08 64.7 163 42.3
AUR62027430 Chenopodium quinoa HOM05D003453 ORTHO05D004154 2.7e-08 64.3 152 47.4
Manes.14G060900 Manihot esculenta HOM05D002488 ORTHO05D002613 2.7e-08 64.3 145 32.4
CAN.G338.29 Capsicum annuum HOM05D002488 ORTHO05D002613 3.6e-08 63.9 163 30.1
Dinv25469 Davidia involucrata HOM05D003453 ORTHO05D004154 6.1e-08 63.2 136 66.9
Sed0024940 Sechium edule HOM05D003453 ORTHO05D004154 6.1e-08 63.2 205 50.2
ATR0824G118 Amborella trichopoda HOM05D002488 ORTHO05D002613 7.9e-08 62.8 161 28.0
MD10G1041600 Malus domestica HOM05D002488 ORTHO05D002613 7.9e-08 62.8 129 29.5
Phvul.009G234500 Phaseolus vulgaris HOM05D003453 ORTHO05D004154 1.0e-07 62.4 84 65.5
Prupe.8G003900 Prunus persica HOM05D002488 ORTHO05D002613 1.0e-07 62.4 92 37.0
Gohir.A05G408700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 1.4e-07 62.0 135 53.3
MBI14_g10728_MAGBIO Magnolia biondii HOM05D003453 ORTHO05D004154 1.4e-07 62.0 136 48.5
Hma1.2p1_0235F.1_g098820 Hydrangea macrophylla HOM05D003453 ORTHO05D004154 1.8e-07 61.6 136 55.1
Lj6g0025589 Lotus japonicus HOM05D003453 ORTHO05D004154 2.3e-07 61.2 81 63.0
Duzib168G0040 Durio zibethinus HOM05D003453 ORTHO05D004154 3.0e-07 60.8 92 52.2
Gorai.012G008100 Gossypium raimondii HOM05D003453 ORTHO05D004154 3.0e-07 60.8 135 41.5
QL02p064658 Quercus lobata HOM05D003453 ORTHO05D004154 3.0e-07 60.8 84 61.9
THA.LOC104817769 Tarenaya hassleriana HOM05D003453 ORTHO05D004154 3.0e-07 60.8 290 49.3
Nitab4.5_0001335g0020 Nicotiana tabacum HOM05D003453 ORTHO05D004154 3.9e-07 60.5 136 58.8
Sed0001635 Sechium edule HOM05D003453 ORTHO05D004154 3.9e-07 60.5 155 58.7
HPP92_010787 Vanilla planifolia HOM05D003453 ORTHO05D004154 3.9e-07 60.5 141 51.8
Lalb_Chr13g0297591 Lupinus albus HOM05D002488 ORTHO05D002613 5.1e-07 60.1 97 35.1
Thecc.09G192200 Theobroma cacao HOM05D003453 ORTHO05D004154 5.1e-07 60.1 93 57.0
ATR0580G242 Amborella trichopoda HOM05D003453 ORTHO05D004154 6.7e-07 59.7 204 46.1
AL3G48980 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 6.7e-07 59.7 84 63.1
AT2G19330 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 6.7e-07 59.7 84 64.3
CsaV3_1G001020 Cucumis sativus L. HOM05D002488 ORTHO05D002613 6.7e-07 59.7 162 27.8
Gohir.D04G006700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 6.7e-07 59.7 135 50.4
Lalb_Chr23g0273331 Lupinus albus HOM05D002488 ORTHO05D002613 6.7e-07 59.7 92 31.5
DCAR_018009 Daucus carota HOM05D003453 ORTHO05D004154 8.8e-07 59.3 146 55.5
Cpa.g.sc159.31 Carica papaya HOM05D002488 ORTHO05D002613 1.1e-06 58.9 141 29.1
Aa31LG3G390 Aethionema arabicum HOM05D003453 ORTHO05D004154 1.5e-06 58.5 137 57.7
CiPaw.07G199200 Carya illinoinensis HOM05D003453 ORTHO05D004154 1.5e-06 58.5 150 46.7
Duzib205G2026 Durio zibethinus HOM05D002488 ORTHO05D002613 1.5e-06 58.5 140 28.6
Eucgr.C00085 Eucalyptus grandis HOM05D003453 ORTHO05D004154 1.5e-06 58.5 79 59.5
THA.LOC104814639 Tarenaya hassleriana HOM05D003453 ORTHO05D004154 1.5e-06 58.5 160 41.9
Atru.chr9.2572 Acer truncatum HOM05D002488 ORTHO05D002613 2.0e-06 58.2 146 28.1
Aa31LG2G20670 Aethionema arabicum HOM05D003453 ORTHO05D004154 2.0e-06 58.2 79 63.3
MELO3C026254.2 Cucumis melo HOM05D002488 ORTHO05D002613 2.0e-06 58.2 166 25.9
Sabra18G0114200 Salix brachista HOM05D003453 ORTHO05D004154 2.0e-06 58.2 156 46.2
BcaC06g36564 Brassica carinata HOM05D003453 ORTHO05D004154 2.6e-06 57.8 79 64.6
Ciclev10008785m.g Citrus clementina HOM05D003453 ORTHO05D004154 2.6e-06 57.8 162 45.1
AagrBONN_evm.TU.Sc2ySwM_368.3263 Anthoceros agrestis HOM05D004636 ORTHO05D005584 3.3e-06 57.4 92 35.9
ClCG06G017390 Citrullus lanatus HOM05D002488 ORTHO05D002613 3.3e-06 57.4 160 27.5
Glyma.15G167800 Glycine max HOM05D003453 ORTHO05D004154 3.3e-06 57.4 159 41.5
SHI03070 Sapria himalayana HOM05D003453 ORTHO05D004154 3.3e-06 57.4 209 29.7
Sp3g32700 Schrenkiella parvula HOM05D003453 ORTHO05D004154 3.3e-06 57.4 84 60.7
Nn2g14939 Nelumbo nucifera HOM05D002488 ORTHO05D002613 4.4e-06 57.0 92 32.6
QL10p006915 Quercus lobata HOM05D002488 ORTHO05D002613 4.4e-06 57.0 92 34.8
AT4G29880 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 5.7e-06 56.6 81 55.6
MSTRG.19360 Avicennia marina HOM05D003453 ORTHO05D004154 5.7e-06 56.6 136 65.4
BraA03t14715Z Brassica rapa HOM05D003453 ORTHO05D004154 5.7e-06 56.6 141 39.7
CiPaw.11G020700 Carya illinoinensis HOM05D002488 ORTHO05D002613 5.7e-06 56.6 87 34.5
Gohir.A12G199300 Gossypium hirsutum HOM05D002488 ORTHO05D002613 5.7e-06 56.6 92 34.8
Gohir.D12G202100 Gossypium hirsutum HOM05D002488 ORTHO05D002613 5.7e-06 56.6 92 34.8
MD05G1037800 Malus domestica HOM05D002488 ORTHO05D002613 5.7e-06 56.6 92 34.8
arahy.Tifrunner.gnm1.ann1.3E2B2N Arachis hypogaea HOM05D003453 ORTHO05D004154 7.4e-06 56.2 84 56.0
arahy.Tifrunner.gnm1.ann1.N816GG Arachis hypogaea HOM05D003453 ORTHO05D004154 7.4e-06 56.2 84 56.0
A07p01420 Brassica napus HOM05D003453 ORTHO05D004154 7.4e-06 56.2 163 42.3
C07p02870 Brassica napus HOM05D003453 ORTHO05D004154 7.4e-06 56.2 163 42.3
BolC7t40684H Brassica oleracea HOM05D003453 ORTHO05D004154 7.4e-06 56.2 163 42.3
BraA07t27936Z Brassica rapa HOM05D003453 ORTHO05D004154 7.4e-06 56.2 163 42.3
arahy.Tifrunner.gnm1.ann1.9WU370 Arachis hypogaea HOM05D002488 ORTHO05D002613 9.7e-06 55.8 165 26.7
CANSAT80G1691 Cannabis sativa HOM05D002488 ORTHO05D002613 9.7e-06 55.8 85 36.5
Glyma.09G061500 Glycine max HOM05D003453 ORTHO05D004154 9.7e-06 55.8 85 62.4
Psat4g060240 Pisum sativum HOM05D002488 ORTHO05D002613 9.7e-06 55.8 92 31.5
PGR018G0002 Punica granatum HOM05D003453 ORTHO05D004154 9.7e-06 55.8 136 51.5
PGR142G3132 Punica granatum HOM05D003453 ORTHO05D004154 9.7e-06 55.8 136 51.5
PGR142G4131 Punica granatum HOM05D003453 ORTHO05D004154 9.7e-06 55.8 136 51.5


User provided reference genes

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