Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36022 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 5.5e-37 157.1 81 100.0
SEGI_14802 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 6.8e-27 123.6 65 96.9
GSVIVG01013070001 Vitis vinifera HOM05D002388 ORTHO05D008833 7.0e-24 113.6 81 69.1
Lalb_Chr05g0225791 Lupinus albus HOM05D002388 ORTHO05D008833 1.2e-23 112.8 81 67.9
PSO384G4479 Papaver somniferum HOM05D002388 ORTHO05D008833 2.0e-23 112.1 81 66.7
CiPaw.11G097500 Carya illinoinensis HOM05D002388 ORTHO05D008833 3.5e-23 111.3 81 66.7
PSO339G0280 Papaver somniferum HOM05D002388 ORTHO05D008833 5.9e-23 110.5 81 65.4
Cpa.g.sc13.304 Carica papaya HOM05D002388 ORTHO05D008833 1.0e-22 109.8 81 66.7
Sabra01G0106900 Salix brachista HOM05D002388 ORTHO05D008833 1.0e-22 109.8 81 66.7
THA.LOC104804589 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 1.0e-22 109.8 81 65.4
Cc08_g03400 Coffea canephora HOM05D002388 ORTHO05D008833 1.3e-22 109.4 81 69.1
CSS0033524 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 1.7e-22 109.0 81 67.9
CiPaw.12G067300 Carya illinoinensis HOM05D002388 ORTHO05D008833 1.7e-22 109.0 81 66.7
DCAR_004281 Daucus carota HOM05D002388 ORTHO05D008833 1.7e-22 109.0 81 64.2
TWI60G0513 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 1.7e-22 109.0 81 64.2
CSS0026703 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 2.3e-22 108.6 81 67.9
Glyma.13G128600 Glycine max HOM05D002388 ORTHO05D008833 3.0e-22 108.2 81 65.4
MD06G1025500 Malus domestica HOM05D002388 ORTHO05D008833 3.0e-22 108.2 81 63.0
PGR031G2620 Punica granatum HOM05D002388 ORTHO05D008833 3.0e-22 108.2 78 66.7
TWI81G0136 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 3.0e-22 108.2 81 63.0
Lj1g0006191 Lotus japonicus HOM05D002388 ORTHO05D008833 5.0e-22 107.5 81 64.2
Potri.001G138100 Populus trichocarpa HOM05D002388 ORTHO05D008833 5.0e-22 107.5 81 64.2
QL12p001301 Quercus lobata HOM05D002388 ORTHO05D008833 5.0e-22 107.5 78 64.1
Sp5g29500 Schrenkiella parvula HOM05D002388 ORTHO05D008833 5.0e-22 107.5 81 64.2
ATR0564G363 Amborella trichopoda HOM05D002388 ORTHO05D008833 6.6e-22 107.1 81 61.7
arahy.Tifrunner.gnm1.ann1.Y11EX9 Arachis hypogaea HOM05D002388 ORTHO05D008833 6.6e-22 107.1 81 63.0
Ciclev10003014m.g Citrus clementina HOM05D002388 ORTHO05D008833 6.6e-22 107.1 81 64.2
Glyma.10G041600 Glycine max HOM05D002388 ORTHO05D008833 6.6e-22 107.1 81 64.2
HanXRQChr17g0538091 Helianthus annuus HOM05D002388 ORTHO05D008833 6.6e-22 107.1 81 60.5
Medtr2g014320 Medicago truncatula HOM05D002388 ORTHO05D008833 6.6e-22 107.1 79 64.6
Haze_08171 Corylus avellana HOM05D002388 ORTHO05D008833 8.6e-22 106.7 81 65.4
Prupe.5G029600 Prunus persica HOM05D002388 ORTHO05D008833 8.6e-22 106.7 81 61.7
TAR375G0363 Trochodendron aralioides HOM05D002388 ORTHO05D008833 8.6e-22 106.7 81 61.7
Actinidia14785 Actinidia chinensis HOM05D002388 ORTHO05D008833 1.1e-21 106.3 81 64.2
MD16G1280900 Malus domestica HOM05D002388 ORTHO05D008833 1.1e-21 106.3 81 60.5
Medtr8g066600 Medicago truncatula HOM05D002388 ORTHO05D008833 1.1e-21 106.3 81 63.0
Nitab4.5_0000109g0080 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.1e-21 106.3 81 60.5
SalBow6G3465 Salvia bowleyana HOM05D002388 ORTHO05D008833 1.1e-21 106.3 81 63.0
EL10Ac5g12027 Beta vulgaris HOM05D002388 ORTHO05D008833 1.5e-21 105.9 81 64.2
Nitab4.5_0002778g0070 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.5e-21 105.9 78 64.1
AL2G34200 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 1.9e-21 105.5 81 61.7
AT1G74340 Arabidopsis thaliana HOM05D002388 ORTHO05D008833 1.9e-21 105.5 81 61.7
CARHR067600 Cardamine hirsuta HOM05D002388 ORTHO05D008833 1.9e-21 105.5 81 61.7
Eucgr.D02219 Eucalyptus grandis HOM05D002388 ORTHO05D008833 1.9e-21 105.5 81 63.0
Aa31LG4G4590 Aethionema arabicum HOM05D002388 ORTHO05D008833 2.5e-21 105.1 81 63.0
A02p19260 Brassica napus HOM05D002388 ORTHO05D008833 2.5e-21 105.1 81 63.0
BolC2t09212H Brassica oleracea HOM05D002388 ORTHO05D008833 2.5e-21 105.1 81 63.0
BraA07t31559Z Brassica rapa HOM05D002388 ORTHO05D008833 2.5e-21 105.1 81 63.0
Thhalv10019650m.g Eutrema salsugineum HOM05D002388 ORTHO05D008833 2.5e-21 105.1 81 63.0
Os11g0311550 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 2.5e-21 105.1 78 66.7
BraA02t06971Z Brassica rapa HOM05D002388 ORTHO05D008833 3.3e-21 104.8 81 63.0
Carub.0002s2112 Capsella rubella HOM05D002388 ORTHO05D008833 3.3e-21 104.8 81 61.7
ECA246G0855 Erigeron canadensis HOM05D002388 ORTHO05D008833 3.3e-21 104.8 81 59.3
FAN04G1000 Fragaria x ananassa HOM05D002388 ORTHO05D008833 3.3e-21 104.8 81 63.0
Hma1.2p1_0870F.1_g230830 Hydrangea macrophylla HOM05D002388 ORTHO05D008833 3.3e-21 104.8 78 64.1
CDE05G0657 Ceratophyllum demersum HOM05D002388 ORTHO05D008833 4.3e-21 104.4 80 58.8
Duzib068G0043 Durio zibethinus HOM05D002388 ORTHO05D008833 4.3e-21 104.4 81 63.0
Manes.04G058600 Manihot esculenta HOM05D002388 ORTHO05D008833 4.3e-21 104.4 78 64.1
FAN18G1485 Fragaria x ananassa HOM05D002388 ORTHO05D008833 5.6e-21 104.0 81 60.5
Nitab4.5_0000556g0150 Nicotiana tabacum HOM05D002388 ORTHO05D008833 5.6e-21 104.0 81 61.7
Peaxi162Scf00185g00821 Petunia axillaris HOM05D002388 ORTHO05D008833 5.6e-21 104.0 81 60.5
BcaC08g46864 Brassica carinata HOM05D002388 ORTHO05D008833 7.3e-21 103.6 81 63.0
BolC6t39879H Brassica oleracea HOM05D002388 ORTHO05D008833 7.3e-21 103.6 81 63.0
CAN.G137.4 Capsicum annuum HOM05D002388 ORTHO05D008833 7.3e-21 103.6 81 61.7
MELO3C013830.2 Cucumis melo HOM05D002388 ORTHO05D008833 7.3e-21 103.6 81 63.0
SGA_v2.0_scaffold20G09240 Striga asiatica HOM05D002388 ORTHO05D008833 7.3e-21 103.6 78 60.3
TPR.G3364 Trifolium pratense HOM05D002388 ORTHO05D008833 7.3e-21 103.6 81 63.0
vmacro14193 Vaccinium macrocarpon HOM05D002388 ORTHO05D008833 7.3e-21 103.6 81 61.7
CsaV3_3G001440 Cucumis sativus L. HOM05D002388 ORTHO05D008833 9.5e-21 103.2 81 63.0
FAN08G0310 Fragaria x ananassa HOM05D002388 ORTHO05D008833 9.5e-21 103.2 81 60.5
RcHm_v2.0_Chr7g0211611 Rosa chinensis HOM05D002388 ORTHO05D008833 9.5e-21 103.2 81 60.5
Sed0013912 Sechium edule HOM05D002388 ORTHO05D008833 9.5e-21 103.2 81 63.0
Ah.12g055420 Amaranthus hybridus HOM05D002388 ORTHO05D008833 1.2e-20 102.8 81 63.0
Dinv28991 Davidia involucrata HOM05D002388 ORTHO05D008833 1.2e-20 102.8 81 63.0
Gohir.D08G175050 Gossypium hirsutum HOM05D002388 ORTHO05D008833 1.2e-20 102.8 81 63.0
Gorai.004G182800 Gossypium raimondii HOM05D002388 ORTHO05D008833 1.2e-20 102.8 81 63.0
Nn3g19407 Nelumbo nucifera HOM05D002388 ORTHO05D008833 1.2e-20 102.8 81 61.7
Migut.A01083 Erythranthe guttata HOM05D002388 ORTHO05D008833 1.6e-20 102.4 81 59.3
Nitab4.5_0001632g0030 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.6e-20 102.4 81 59.3
Psat4g122960 Pisum sativum HOM05D002388 ORTHO05D008833 1.6e-20 102.4 81 61.7
TAR119G0002 Trochodendron aralioides HOM05D002388 ORTHO05D008833 1.6e-20 102.4 81 60.5
CANSAT21G0073 Cannabis sativa HOM05D002388 ORTHO05D008833 2.1e-20 102.1 81 61.7
Peaxi162Scf00045g00216 Petunia axillaris HOM05D002388 ORTHO05D008833 2.1e-20 102.1 81 59.3
Solyc08g005210.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 2.1e-20 102.1 81 60.5
Sopen08g001240 Solanum pennellii HOM05D002388 ORTHO05D008833 2.1e-20 102.1 81 60.5
COL.COLO4_16958 Corchorus olitorius HOM05D002388 ORTHO05D008833 2.8e-20 101.7 81 61.7
AUR62018655 Chenopodium quinoa HOM05D002388 ORTHO05D008833 3.6e-20 101.3 81 63.0
Lsat_1_v5_gn_3_19620 Lactuca sativa HOM05D002388 ORTHO05D008833 4.7e-20 100.9 78 59.0
Thecc.03G308600 Theobroma cacao HOM05D002388 ORTHO05D008833 4.7e-20 100.9 81 61.7
CAN.G474.16 Capsicum annuum HOM05D002388 ORTHO05D008833 6.2e-20 100.5 81 58.0
Duzib205G0142 Durio zibethinus HOM05D002388 ORTHO05D008833 6.2e-20 100.5 81 60.5
CSS0006499 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 8.0e-20 100.1 78 65.4
AUR62007344 Chenopodium quinoa HOM05D002388 ORTHO05D008833 8.0e-20 100.1 81 63.0
Phvul.003G283500 Phaseolus vulgaris HOM05D002388 ORTHO05D008833 8.0e-20 100.1 81 60.5
unitig_32.g10897 Utricularia gibba HOM05D002388 ORTHO05D008833 8.0e-20 100.1 81 59.3
CSS0009097 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 1.4e-19 99.4 78 65.4
Peaxi162Scf00038g00010 Petunia axillaris HOM05D002388 ORTHO05D008833 1.8e-19 99.0 78 59.0
Sopen06g021590 Solanum pennellii HOM05D002388 ORTHO05D008833 3.1e-19 98.2 81 56.8
Pp3c22_2990 Physcomitrium patens HOM05D002388 ORTHO05D008833 4.0e-19 97.8 77 64.9
PGSC0003DMG400016784 Solanum tuberosum HOM05D002388 ORTHO05D008833 8.9e-19 96.7 81 55.6
PGSC0003DMG400003487 Solanum tuberosum HOM05D002388 ORTHO05D008833 1.2e-18 96.3 81 58.0
Solyc06g066400.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 3.4e-18 94.7 81 54.3
AagrBONN_evm.TU.Sc2ySwM_228.4391 Anthoceros agrestis HOM05D003123 ORTHO05D003492 1.3e-17 92.8 76 57.9
THA.LOC104808763 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 1.7e-17 92.4 76 57.9
Mapoly0067s0029 Marchantia polymorpha HOM05D002388 ORTHO05D008833 3.7e-17 91.3 80 53.8
Nn1g00187 Nelumbo nucifera HOM05D002388 ORTHO05D008833 6.6e-14 80.5 57 66.7
CSS0023919 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 7.3e-13 77.0 78 53.8
PGSC0003DMG400043827 Solanum tuberosum HOM05D002388 ORTHO05D008833 7.3e-13 77.0 81 49.4
ClCG10G001370 Citrullus lanatus HOM05D002388 ORTHO05D008833 9.5e-13 76.6 53 67.9
Os02g0140101 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 6.2e-12 73.9 48 70.8
Hund14364 Selenicereus undatus HOM05D002388 ORTHO05D008833 8.1e-12 73.6 51 66.7
BcaB05g24849 Brassica carinata HOM05D002388 ORTHO05D008833 6.8e-11 70.5 50 64.0
PGSC0003DMG400016734 Solanum tuberosum HOM05D002388 ORTHO05D008833 2.6e-10 68.6 55 58.2
arahy.Tifrunner.gnm1.ann1.G961TR Arachis hypogaea HOM05D002388 ORTHO05D008833 4.9e-09 64.3 81 42.0
Peaxi162Scf00218g02111 Petunia axillaris HOM05D004298 ORTHO05D008833 1.7e-06 55.8 38 60.5


User provided reference genes

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