Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22884 Sequoiadendron giganteum HOM05D005286 ORTHO05D006348 1.1e-147 526.6 265 100.0
SEGI_35897 Sequoiadendron giganteum HOM05D005286 ORTHO05D006348 1.1e-147 526.6 265 100.0
Lj1g0003788 Lotus japonicus HOM05D003519 ORTHO05D004443 3.3e-94 349.0 261 65.5
ATR0138G018 Amborella trichopoda HOM05D005286 ORTHO05D006348 7.2e-94 347.8 240 71.7
Lalb_Chr23g0272691 Lupinus albus HOM05D005286 ORTHO05D006348 2.8e-93 345.9 240 69.6
CANSAT35G0194 Cannabis sativa HOM05D005286 ORTHO05D006348 4.7e-93 345.1 253 66.8
Solyc12g088020.1 Solanum lycopersicum HOM05D005286 ORTHO05D006348 4.7e-93 345.1 239 68.2
Sopen12g030050 Solanum pennellii HOM05D005286 ORTHO05D006348 1.0e-92 344.0 239 68.2
Atru.chr4.988 Acer truncatum HOM05D005286 ORTHO05D006348 5.2e-92 341.7 240 69.2
Rhsim08G0000400 Rhododendron simsii HOM05D005286 ORTHO05D006348 6.8e-92 341.3 238 68.5
GSVIVG01022340001 Vitis vinifera HOM05D005286 ORTHO05D006348 1.2e-91 340.5 259 66.0
Prupe.4G274700 Prunus persica HOM05D005286 ORTHO05D006348 1.5e-91 340.1 254 65.7
Nn1g08960 Nelumbo nucifera HOM05D005286 ORTHO05D006348 2.0e-91 339.7 258 65.1
ClCG04G002290 Citrullus lanatus HOM05D005286 ORTHO05D006348 2.6e-91 339.3 261 64.8
Thecc.01G137300 Theobroma cacao HOM05D005286 ORTHO05D006348 2.6e-91 339.3 240 68.3
Lj4A421T8 Lonicera japonica HOM05D005286 ORTHO05D006348 5.7e-91 338.2 254 65.0
CAN.G1104.7 Capsicum annuum HOM05D005286 ORTHO05D006348 7.5e-91 337.8 260 65.0
Peaxi162Scf00151g00811 Petunia axillaris HOM05D005286 ORTHO05D006348 7.5e-91 337.8 239 67.4
PGSC0003DMG400045338 Solanum tuberosum HOM05D005286 ORTHO05D006348 7.5e-91 337.8 239 68.2
Nn5g28436 Nelumbo nucifera HOM05D005286 ORTHO05D006348 9.8e-91 337.4 243 66.7
CSS0034769 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.3e-90 337.0 238 67.6
Glyma.06G155750 Glycine max HOM05D005286 ORTHO05D006348 1.3e-90 337.0 240 66.7
Gohir.D12G083400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 1.3e-90 337.0 259 64.9
Potri.007G101600 Populus trichocarpa HOM05D005286 ORTHO05D006348 1.3e-90 337.0 265 62.6
HPP92_011629 Vanilla planifolia HOM05D005286 ORTHO05D006348 1.3e-90 337.0 245 67.8
MD15G1135000 Malus domestica HOM05D005286 ORTHO05D006348 1.7e-90 336.7 264 63.6
Phvul.009G154600 Phaseolus vulgaris HOM05D005286 ORTHO05D006348 2.2e-90 336.3 240 66.7
TAR625G0087 Trochodendron aralioides HOM05D005286 ORTHO05D006348 2.2e-90 336.3 238 70.6
Ca_16981_v3 Cicer arietinum L. HOM05D005286 ORTHO05D006348 2.8e-90 335.9 240 66.7
Gorai.008G094500 Gossypium raimondii HOM05D005286 ORTHO05D006348 2.8e-90 335.9 259 64.9
Hma1.2p1_3117F.1_g332810 Hydrangea macrophylla HOM05D005286 ORTHO05D006348 2.8e-90 335.9 239 67.8
RcHm_v2.0_Chr2g0122521 Rosa chinensis HOM05D005286 ORTHO05D006348 2.8e-90 335.9 240 67.9
CiPaw.03G118000 Carya illinoinensis HOM05D005286 ORTHO05D006348 3.7e-90 335.5 240 67.5
CsaV3_4G030380 Cucumis sativus L. HOM05D005286 ORTHO05D006348 3.7e-90 335.5 249 66.3
CSS0004303 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 4.9e-90 335.1 238 67.6
Aqoxy5G02419 Aquilegia oxysepala HOM05D005286 ORTHO05D006348 6.3e-90 334.7 252 65.1
FvH4_1g24860 Fragaria vesca HOM05D005286 ORTHO05D006348 8.3e-90 334.3 240 67.5
FAN19G2916 Fragaria x ananassa HOM05D005286 ORTHO05D006348 8.3e-90 334.3 240 67.5
MSTRG.23499 Avicennia marina HOM05D005286 ORTHO05D006348 1.1e-89 334.0 239 68.6
Ciclev10000962m.g Citrus clementina HOM05D005286 ORTHO05D006348 1.1e-89 334.0 265 62.6
FAN23G2334 Fragaria x ananassa HOM05D005286 ORTHO05D006348 1.1e-89 334.0 264 64.0
MBI06_g35210_MAGBIO Magnolia biondii HOM05D005286 ORTHO05D006348 1.1e-89 334.0 239 68.6
TPR.G33580 Trifolium pratense HOM05D005286 ORTHO05D006348 1.1e-89 334.0 240 67.1
VMungo1309G1016 Vigna mungo HOM05D005286 ORTHO05D006348 1.1e-89 334.0 240 67.1
Medtr3g096675 Medicago truncatula HOM05D005286 ORTHO05D006348 1.4e-89 333.6 240 67.5
MELO3C008897.2 Cucumis melo HOM05D005286 ORTHO05D006348 1.8e-89 333.2 249 65.9
FAN26G1990 Fragaria x ananassa HOM05D005286 ORTHO05D006348 1.8e-89 333.2 240 67.5
Sc09g0002230 Simmondsia chinensis HOM05D005286 ORTHO05D006348 1.8e-89 333.2 239 66.1
vmacro18685 Vaccinium macrocarpon HOM05D005286 ORTHO05D006348 1.8e-89 333.2 238 68.1
Actinidia16523 Actinidia chinensis HOM05D005286 ORTHO05D006348 2.4e-89 332.8 265 62.3
Aa31LG1G17980 Aethionema arabicum HOM05D005286 ORTHO05D006348 2.4e-89 332.8 264 63.3
arahy.Tifrunner.gnm1.ann1.7K8RK5 Arachis hypogaea HOM05D005286 ORTHO05D006348 2.4e-89 332.8 240 65.8
AUR62006858 Chenopodium quinoa HOM05D005286 ORTHO05D006348 2.4e-89 332.8 267 61.0
ECA248G0233 Erigeron canadensis HOM05D005286 ORTHO05D006348 2.4e-89 332.8 257 64.6
FAN28G1250 Fragaria x ananassa HOM05D005286 ORTHO05D006348 2.4e-89 332.8 240 67.5
Sabra07G0083800 Salix brachista HOM05D005286 ORTHO05D006348 2.4e-89 332.8 240 65.8
Duzib187G0999 Durio zibethinus HOM05D005286 ORTHO05D006348 3.1e-89 332.4 261 64.0
TWI75G1712 Tripterygium wilfordii HOM05D005286 ORTHO05D006348 3.1e-89 332.4 264 63.6
Hund21799 Selenicereus undatus HOM05D005286 ORTHO05D006348 4.1e-89 332.0 243 64.6
arahy.Tifrunner.gnm1.ann1.ZN9YLD Arachis hypogaea HOM05D005286 ORTHO05D006348 5.4e-89 331.6 240 65.8
Gohir.A12G085400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 7.0e-89 331.3 259 63.7
Sed0025698 Sechium edule HOM05D005286 ORTHO05D006348 9.2e-89 330.9 240 67.1
SGA_v2.0_scaffold189G40378 Striga asiatica HOM05D005286 ORTHO05D006348 9.2e-89 330.9 238 68.5
CSS0028284 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.2e-88 330.5 265 61.9
Manes.12G159000 Manihot esculenta HOM05D005286 ORTHO05D006348 1.2e-88 330.5 265 64.9
Sabra07G0083900 Salix brachista HOM05D005286 ORTHO05D006348 1.6e-88 330.1 240 64.2
Duzib147G1331 Durio zibethinus HOM05D005286 ORTHO05D006348 2.7e-88 329.3 278 60.8
Potri.007G101700 Populus trichocarpa HOM05D005286 ORTHO05D006348 3.5e-88 328.9 240 64.6
AUR62000514 Chenopodium quinoa HOM05D005286 ORTHO05D006348 5.9e-88 328.2 267 59.9
AL8G41150 Arabidopsis lyrata HOM05D005286 ORTHO05D006348 7.8e-88 327.8 266 62.0
PGR119G0364 Punica granatum HOM05D005286 ORTHO05D006348 7.8e-88 327.8 266 62.0
QL10p041275 Quercus lobata HOM05D005286 ORTHO05D006348 7.8e-88 327.8 259 62.5
Cfa021278 Carpinus fangiana HOM05D005286 ORTHO05D006348 1.3e-87 327.0 240 66.7
Migut.H00797 Erythranthe guttata HOM05D005286 ORTHO05D006348 1.3e-87 327.0 264 62.9
Hma1.2p1_0310F.1_g121020 Hydrangea macrophylla HOM05D005286 ORTHO05D006348 1.3e-87 327.0 239 66.5
QL10p041264 Quercus lobata HOM05D005286 ORTHO05D006348 1.7e-87 326.6 259 61.0
EL10Ac4g09623 Beta vulgaris HOM05D005286 ORTHO05D006348 2.9e-87 325.9 265 59.6
CARHR277830 Cardamine hirsuta HOM05D005286 ORTHO05D006348 5.0e-87 325.1 261 62.8
AT5G63910 Arabidopsis thaliana HOM05D005286 ORTHO05D006348 6.6e-87 324.7 262 61.1
THA.LOC104819345 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 6.6e-87 324.7 264 60.6
Ah.06g191030 Amaranthus hybridus HOM05D005286 ORTHO05D006348 1.1e-86 323.9 239 62.8
BcaB02g09762 Brassica carinata HOM05D005286 ORTHO05D006348 3.3e-86 322.4 264 60.2
BcaC01g02644 Brassica carinata HOM05D005286 ORTHO05D006348 4.3e-86 322.0 266 60.2
Lsat_1_v5_gn_1_78000 Lactuca sativa HOM05D005286 ORTHO05D006348 7.3e-86 321.2 239 64.4
THA.LOC104818420 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 7.3e-86 321.2 269 62.5
Oeu037874.1 Olea europaea HOM05D005286 ORTHO05D006348 2.8e-85 319.3 239 64.9
PSO170G0528 Papaver somniferum HOM05D005286 ORTHO05D006348 2.8e-85 319.3 238 65.5
HanXRQChr01g0017141 Helianthus annuus HOM05D005286 ORTHO05D006348 3.6e-85 318.9 239 64.0
Sp2g26980 Schrenkiella parvula HOM05D005286 ORTHO05D006348 8.0e-85 317.8 264 60.2
CSS0025452 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.0e-84 317.4 237 64.1
C03p62500 Brassica napus HOM05D005286 ORTHO05D006348 1.4e-84 317.0 265 59.2
BolC3t18507H Brassica oleracea HOM05D005286 ORTHO05D006348 1.4e-84 317.0 265 59.2
Cc07_g21020 Coffea canephora HOM05D005286 ORTHO05D006348 1.4e-84 317.0 239 64.9
A06p30530 Brassica napus HOM05D005286 ORTHO05D006348 2.3e-84 316.2 238 64.3
BraA06t26002Z Brassica rapa HOM05D005286 ORTHO05D006348 2.3e-84 316.2 238 64.3
Carub.0008s2471 Capsella rubella HOM05D005286 ORTHO05D006348 3.1e-84 315.8 264 61.0
Nitab4.5_0000954g0020 Nicotiana tabacum HOM05D005286 ORTHO05D006348 2.2e-82 309.7 239 64.0
Zm00001eb434510 Zea mays HOM05D005286 ORTHO05D006348 2.0e-80 303.1 244 63.1
Mapoly0032s0088 Marchantia polymorpha HOM05D005286 ORTHO05D006348 6.6e-79 298.1 239 61.1
SMO119G0327 Selaginella moellendorffii HOM05D005286 ORTHO05D006348 2.8e-77 292.7 242 59.1
Dinv15529 Davidia involucrata HOM05D005286 ORTHO05D006348 7.5e-75 284.6 197 68.5
Dinv24561 Davidia involucrata HOM05D005286 ORTHO05D006348 7.5e-75 284.6 197 68.5
Thhalv10004131m.g Eutrema salsugineum HOM05D005286 ORTHO05D006348 9.8e-75 284.3 264 57.2
Cpa.g.sc37.7 Carica papaya HOM05D005286 ORTHO05D006348 4.1e-73 278.9 240 60.0
Eucgr.I00123 Eucalyptus grandis HOM05D005286 ORTHO05D006348 1.6e-72 276.9 305 52.8
CBR_g8546 Chara braunii HOM05D005286 ORTHO05D006348 6.0e-64 248.4 265 48.3
DCAR_000205 Daucus carota HOM05D005286 ORTHO05D006348 9.9e-59 231.1 179 60.9
unitig_748.g8002 Utricularia gibba HOM05D005286 ORTHO05D006348 2.2e-58 229.9 174 63.8
Hund07236 Selenicereus undatus HOM05D005286 ORTHO05D006348 3.8e-58 229.2 175 62.3
COL.COLO4_35813 Corchorus olitorius HOM05D005286 ORTHO05D006348 1.9e-57 226.9 240 52.5
Gohir.D12G083401 Gossypium hirsutum HOM05D005286 ORTHO05D006348 3.0e-55 219.5 161 66.5
Oeu039334.1 Olea europaea HOM05D005286 ORTHO05D006348 2.5e-54 216.5 175 61.1
Nitab4.5_0000432g0040 Nicotiana tabacum HOM05D005286 ORTHO05D006348 5.6e-54 215.3 239 50.2
DCAR_019994 Daucus carota HOM05D005286 ORTHO05D006348 1.3e-50 204.1 266 44.7
CDE08G1664 Ceratophyllum demersum HOM05D005286 ORTHO05D006348 1.3e-45 187.6 153 62.1
Psat5g059680 Pisum sativum HOM05D005286 ORTHO05D006348 7.1e-41 171.8 118 67.8
AagrBONN_evm.TU.Sc2ySwM_362.2029 Anthoceros agrestis HOM05D005286 ORTHO05D006348 4.0e-36 156.0 122 60.7
Haze_10873 Corylus avellana HOM05D005286 ORTHO05D006348 2.6e-35 153.3 176 52.8
Pp3c3_10560 Physcomitrium patens HOM05D005286 ORTHO05D006348 4.2e-33 146.0 119 58.0
CBR_g864 Chara braunii HOM05D005286 ORTHO05D006348 2.1e-24 117.1 247 31.2
Glyma.04G210301 Glycine max HOM05D005286 ORTHO05D006348 4.6e-16 89.4 55 74.5
PRCOL_00003919 Prasinoderma coloniale HOM05D005286 ORTHO05D006348 6.7e-15 85.5 280 30.4
SalBow2G0549 Salvia bowleyana HOM05D002652 ORTHO05D002739 3.2e-09 66.6 46 71.7
unitig_748.g8003 Utricularia gibba HOM05D005286 ORTHO05D006348 3.0e-07 60.1 36 83.3


User provided reference genes

Program Settings