Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_35818 Sequoiadendron giganteum HOM05D008002 ORTHO05D010148 8.6e-113 410.2 192 100.0
PSO541G1248 Papaver somniferum HOM05D008002 ORTHO05D010148 9.7e-40 167.5 200 47.5
Aqoxy6G02976 Aquilegia oxysepala HOM05D008002 ORTHO05D010148 1.1e-38 164.1 172 46.5
Nn8g40377 Nelumbo nucifera HOM05D008002 ORTHO05D010148 3.1e-38 162.5 193 45.1
Nn2g12628 Nelumbo nucifera HOM05D008002 ORTHO05D010148 4.1e-38 162.2 190 45.3
CiPaw.05G094700 Carya illinoinensis HOM05D008002 ORTHO05D010148 1.3e-36 157.1 142 52.8
TWI75G0824 Tripterygium wilfordii HOM05D008002 ORTHO05D010148 1.7e-36 156.8 134 55.2
TAR376G1088 Trochodendron aralioides HOM05D008002 ORTHO05D010148 1.1e-35 154.1 139 54.0
Actinidia17988 Actinidia chinensis HOM05D008002 ORTHO05D010148 4.2e-35 152.1 178 43.3
MD05G1143100 Malus domestica HOM05D008002 ORTHO05D010148 4.2e-35 152.1 203 44.3
MELO3C015697.2 Cucumis melo HOM05D008002 ORTHO05D010148 7.2e-35 151.4 136 50.0
Hund00100 Selenicereus undatus HOM05D008002 ORTHO05D010148 7.2e-35 151.4 186 45.2
Sed0014792 Sechium edule HOM05D008002 ORTHO05D010148 9.4e-35 151.0 171 43.9
CANSAT25G0111 Cannabis sativa HOM05D008002 ORTHO05D010148 1.2e-34 150.6 139 51.8
CsaV3_7G002100 Cucumis sativus L. HOM05D008002 ORTHO05D010148 2.7e-34 149.4 136 49.3
FvH4_2g17020 Fragaria vesca HOM05D008002 ORTHO05D010148 3.6e-34 149.1 210 42.4
FAN27G2383 Fragaria x ananassa HOM05D008002 ORTHO05D010148 3.6e-34 149.1 210 42.4
Gohir.A04G111300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 3.6e-34 149.1 201 41.8
Potri.004G208200 Populus trichocarpa HOM05D008002 ORTHO05D010148 4.7e-34 148.7 190 43.7
FAN24G1487 Fragaria x ananassa HOM05D008002 ORTHO05D010148 6.1e-34 148.3 205 42.9
Gorai.012G138300 Gossypium raimondii HOM05D008002 ORTHO05D010148 8.0e-34 147.9 201 41.8
FAN15G1289 Fragaria x ananassa HOM05D008002 ORTHO05D010148 1.4e-33 147.1 206 41.7
RcHm_v2.0_Chr6g0281201 Rosa chinensis HOM05D008002 ORTHO05D010148 2.3e-33 146.4 206 40.3
CiPaw.06G114200 Carya illinoinensis HOM05D008002 ORTHO05D010148 4.0e-33 145.6 139 49.6
Sabra04G0140100 Salix brachista HOM05D008002 ORTHO05D010148 4.0e-33 145.6 185 43.8
Duzib248G0441 Durio zibethinus HOM05D008002 ORTHO05D010148 5.2e-33 145.2 150 48.0
Eucgr.I01542 Eucalyptus grandis HOM05D008002 ORTHO05D010148 5.2e-33 145.2 139 50.4
MD10G1142900 Malus domestica HOM05D008002 ORTHO05D010148 5.2e-33 145.2 150 51.3
Sc08g0002060 Simmondsia chinensis HOM05D008002 ORTHO05D010148 5.2e-33 145.2 137 48.2
Rhsim11G0198500 Rhododendron simsii HOM05D008002 ORTHO05D010148 6.7e-33 144.8 155 47.7
Prupe.8G181900 Prunus persica HOM05D008002 ORTHO05D010148 1.5e-32 143.7 147 49.0
Gohir.A03G170200 Gossypium hirsutum HOM05D008002 ORTHO05D010148 2.0e-32 143.3 198 39.9
Gohir.D02G193300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 2.0e-32 143.3 197 39.6
Gohir.D04G151600 Gossypium hirsutum HOM05D008002 ORTHO05D010148 2.6e-32 142.9 201 40.8
Thecc.02G147800 Theobroma cacao HOM05D008002 ORTHO05D010148 2.6e-32 142.9 151 47.7
Duzib132G1147 Durio zibethinus HOM05D008002 ORTHO05D010148 3.3e-32 142.5 159 44.0
PGR142G3621 Punica granatum HOM05D008002 ORTHO05D010148 5.7e-32 141.7 193 40.9
QL11p056798 Quercus lobata HOM05D000114 ORTHO05D009898 9.7e-32 141.0 230 37.4
Actinidia20583 Actinidia chinensis HOM05D008002 ORTHO05D010148 1.3e-31 140.6 179 41.3
Atru.chr5.3576 Acer truncatum HOM05D008002 ORTHO05D010148 2.2e-31 139.8 193 39.9
Gorai.005G216100 Gossypium raimondii HOM05D008002 ORTHO05D010148 2.8e-31 139.4 148 46.6
Cfa005392 Carpinus fangiana HOM05D008002 ORTHO05D010148 3.7e-31 139.0 143 45.5
Potri.009G169400 Populus trichocarpa HOM05D008002 ORTHO05D010148 3.7e-31 139.0 143 48.3
ATR0763G180 Amborella trichopoda HOM05D008002 ORTHO05D010148 6.3e-31 138.3 112 58.9
Haze_01959 Corylus avellana HOM05D008002 ORTHO05D010148 6.3e-31 138.3 145 46.9
Thhalv10027398m.g Eutrema salsugineum HOM05D008002 ORTHO05D010148 2.4e-30 136.3 132 50.0
AT4G38213 Arabidopsis thaliana HOM05D008002 ORTHO05D010148 4.1e-30 135.6 133 50.4
CDE10G0514 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 4.1e-30 135.6 125 52.0
GSVIVG01023858001 Vitis vinifera HOM05D008002 ORTHO05D010148 4.1e-30 135.6 146 47.3
Dinv14183 Davidia involucrata HOM05D008002 ORTHO05D010148 2.0e-29 133.3 156 42.3
Ciclev10029829m.g Citrus clementina HOM05D008002 ORTHO05D010148 7.7e-29 131.3 185 40.5
Sp7g37530 Schrenkiella parvula HOM05D008002 ORTHO05D010148 7.7e-29 131.3 133 48.1
Lsat_1_v5_gn_3_48401 Lactuca sativa HOM05D008002 ORTHO05D010148 1.0e-28 131.0 138 47.1
Haze_01969 Corylus avellana HOM05D008002 ORTHO05D010148 2.2e-28 129.8 166 42.8
Gohir.D13G057750 Gossypium hirsutum HOM05D008002 ORTHO05D010148 5.0e-28 128.6 146 45.2
Gorai.013G065000 Gossypium raimondii HOM05D008002 ORTHO05D010148 6.5e-28 128.3 146 46.6
COL.COLO4_03847 Corchorus olitorius HOM05D008002 ORTHO05D010148 1.5e-27 127.1 152 44.1
Carub.0007s0013 Capsella rubella HOM05D008002 ORTHO05D010148 2.5e-27 126.3 132 46.2
PSO675G9248 Papaver somniferum HOM05D008002 ORTHO05D010148 5.5e-27 125.2 126 50.8
Zm00001eb035270 Zea mays HOM05D008002 ORTHO05D010148 7.2e-27 124.8 154 43.5
Eucgr.H05000 Eucalyptus grandis HOM05D008002 ORTHO05D010148 1.2e-26 124.0 138 47.1
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 1.6e-26 123.6 111 52.3
Oeu006116.1 Olea europaea HOM05D008002 ORTHO05D010148 3.6e-26 122.5 200 38.5
HPP92_007470 Vanilla planifolia HOM05D008002 ORTHO05D010148 3.6e-26 122.5 178 39.9
ClCG02G003270 Citrullus lanatus HOM05D008002 ORTHO05D010148 8.0e-26 121.3 103 50.5
Os08g0512100 Oryza sativa ssp. japonica HOM05D008002 ORTHO05D010148 1.5e-24 117.1 165 40.0
CSS0003373 Camellia sinensis var. sinensis HOM05D008002 ORTHO05D010148 5.4e-22 108.6 109 47.7
AL7G10120 Arabidopsis lyrata HOM05D008002 ORTHO05D010148 1.6e-21 107.1 117 47.9
HanXRQChr15g0490081 Helianthus annuus HOM05D008002 ORTHO05D010148 2.7e-21 106.3 99 45.5
HanXRQChr15g0479771 Helianthus annuus HOM05D008002 ORTHO05D010148 1.0e-20 104.4 110 47.3
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 1.5e-19 100.5 86 58.1
CDE10G0941 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 7.2e-19 98.2 88 54.5
MBI03_g24838_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 1.2e-18 97.4 84 57.1
CARHR293990 Cardamine hirsuta HOM05D008002 ORTHO05D010148 6.1e-18 95.1 109 46.8
MBI01_g17256_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 6.1e-18 95.1 76 59.2
TAR628G1479 Trochodendron aralioides HOM05D008002 ORTHO05D010148 5.2e-17 92.0 88 50.0
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 1.5e-16 90.5 87 55.2
Gohir.A13G064166 Gossypium hirsutum HOM05D008002 ORTHO05D010148 2.6e-08 63.2 46 56.5


User provided reference genes

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