Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_35628 Sequoiadendron giganteum HOM05D005283 ORTHO05D006769 0.0e+00 1147.5 626 100.0
Mapoly0037s0064 Marchantia polymorpha HOM05D005283 ORTHO05D006769 4.1e-156 555.8 650 52.3
Zm00001eb142310 Zea mays HOM05D005283 ORTHO05D006769 4.3e-52 210.3 412 33.3
Os01g0932600 Oryza sativa ssp. japonica HOM05D005283 ORTHO05D006769 8.0e-51 206.1 437 33.6
BcaC06g33444 Brassica carinata HOM05D005283 ORTHO05D006769 1.8e-50 204.9 409 32.3
AL7G39450 Arabidopsis lyrata HOM05D005283 ORTHO05D006769 2.3e-50 204.5 429 31.2
Gohir.D02G054700 Gossypium hirsutum HOM05D005283 ORTHO05D006769 4.0e-50 203.8 452 32.7
Sc25g0004780 Simmondsia chinensis HOM05D005283 ORTHO05D006769 4.0e-50 203.8 424 32.8
Gorai.005G060600 Gossypium raimondii HOM05D005283 ORTHO05D006769 6.8e-50 203.0 452 32.5
Sp7g14240 Schrenkiella parvula HOM05D005283 ORTHO05D006769 6.8e-50 203.0 208 47.6
AT4G15840 Arabidopsis thaliana HOM05D005283 ORTHO05D006769 1.5e-49 201.8 208 48.1
Hma1.2p1_1185F.1_g265090 Hydrangea macrophylla HOM05D005283 ORTHO05D006769 1.5e-49 201.8 451 30.2
CARHR290370 Cardamine hirsuta HOM05D005283 ORTHO05D006769 2.0e-49 201.4 208 48.1
Thhalv10024402m.g Eutrema salsugineum HOM05D005283 ORTHO05D006769 2.0e-49 201.4 207 47.3
Gohir.A02G049600 Gossypium hirsutum HOM05D005283 ORTHO05D006769 2.0e-49 201.4 452 32.5
Hund20553 Selenicereus undatus HOM05D005283 ORTHO05D006769 3.4e-49 200.7 417 32.9
Lsat_1_v5_gn_5_54040 Lactuca sativa HOM05D005283 ORTHO05D006769 9.8e-49 199.1 442 30.5
EL10Ac3g06605 Beta vulgaris HOM05D005283 ORTHO05D006769 1.3e-48 198.7 432 32.6
BcaC06g32968 Brassica carinata HOM05D005283 ORTHO05D006769 2.2e-48 198.0 208 47.1
A03p49360 Brassica napus HOM05D005283 ORTHO05D006769 2.2e-48 198.0 230 44.3
C07p47430 Brassica napus HOM05D005283 ORTHO05D006769 2.2e-48 198.0 230 44.3
BolC7t45270H Brassica oleracea HOM05D005283 ORTHO05D006769 2.2e-48 198.0 230 44.3
Carub.0007s2581 Capsella rubella HOM05D005283 ORTHO05D006769 2.2e-48 198.0 262 42.7
BraA03t14037Z Brassica rapa HOM05D005283 ORTHO05D006769 3.7e-48 197.2 230 43.9
GSVIVG01017732001 Vitis vinifera HOM05D005283 ORTHO05D006769 4.9e-48 196.8 228 46.5
Atru.BG.90.p Acer truncatum HOM05D005283 ORTHO05D006769 6.4e-48 196.4 387 35.1
Pp3c16_9230 Physcomitrium patens HOM05D005283 ORTHO05D006769 6.4e-48 196.4 217 47.5
THA.LOC104820270 Tarenaya hassleriana HOM05D005283 ORTHO05D006769 6.4e-48 196.4 199 47.7
Pp3c6_10590 Physcomitrium patens HOM05D005283 ORTHO05D006769 8.3e-48 196.1 200 48.0
Duzib151G1199 Durio zibethinus HOM05D005283 ORTHO05D006769 1.1e-47 195.7 452 29.6
MBI18_g13696_MAGBIO Magnolia biondii HOM05D005283 ORTHO05D006769 1.9e-47 194.9 228 46.1
HanXRQChr13g0411191 Helianthus annuus HOM05D005283 ORTHO05D006769 2.4e-47 194.5 475 30.1
Nitab4.5_0001120g0020 Nicotiana tabacum HOM05D005283 ORTHO05D006769 2.4e-47 194.5 208 47.6
Pp3c5_16090 Physcomitrium patens HOM05D005283 ORTHO05D006769 4.1e-47 193.7 199 47.2
Prupe.1G135400 Prunus persica HOM05D005283 ORTHO05D006769 5.4e-47 193.4 203 48.3
DCAR_027073 Daucus carota HOM05D005283 ORTHO05D006769 7.0e-47 193.0 202 46.5
PGR031G1610 Punica granatum HOM05D005283 ORTHO05D006769 9.2e-47 192.6 208 47.6
ClCG05G006140 Citrullus lanatus HOM05D005283 ORTHO05D006769 1.6e-46 191.8 203 48.3
Manes.03G195900 Manihot esculenta HOM05D005283 ORTHO05D006769 1.6e-46 191.8 290 40.0
AUR62041505 Chenopodium quinoa HOM05D005283 ORTHO05D006769 2.7e-46 191.0 208 46.2
Solyc01g080620.3 Solanum lycopersicum HOM05D005283 ORTHO05D006769 3.5e-46 190.7 311 38.9
Nn3g21453 Nelumbo nucifera HOM05D005283 ORTHO05D006769 4.6e-46 190.3 228 44.7
PSO210G5109 Papaver somniferum HOM05D005283 ORTHO05D006769 4.6e-46 190.3 260 41.5
Thecc.04G285400 Theobroma cacao HOM05D005283 ORTHO05D006769 6.0e-46 189.9 208 46.6
Migut.G00154 Erythranthe guttata HOM05D005283 ORTHO05D006769 7.8e-46 189.5 362 35.6
FAN17G2169 Fragaria x ananassa HOM05D005283 ORTHO05D006769 7.8e-46 189.5 203 46.8
QL06p009017 Quercus lobata HOM05D005283 ORTHO05D006769 7.8e-46 189.5 228 44.7
Sopen01g032430 Solanum pennellii HOM05D005283 ORTHO05D006769 7.8e-46 189.5 299 39.1
Ah.13g074630 Amaranthus hybridus HOM05D005283 ORTHO05D006769 1.0e-45 189.1 235 43.0
MD13G1167900 Malus domestica HOM05D005283 ORTHO05D006769 1.0e-45 189.1 255 42.7
TWI53G1858 Tripterygium wilfordii HOM05D005283 ORTHO05D006769 1.0e-45 189.1 333 38.4
CANSAT78G0446 Cannabis sativa HOM05D005283 ORTHO05D006769 1.3e-45 188.7 224 44.2
MSTRG.3910 Avicennia marina HOM05D005283 ORTHO05D006769 1.7e-45 188.3 511 29.2
Dinv44377 Davidia involucrata HOM05D005283 ORTHO05D006769 1.7e-45 188.3 205 48.3
SGA_v2.0_scaffold18G08298 Striga asiatica HOM05D005283 ORTHO05D006769 1.7e-45 188.3 511 28.8
CDE11G0961 Ceratophyllum demersum HOM05D005283 ORTHO05D006769 3.0e-45 187.6 236 42.8
Glyma.17G026900 Glycine max HOM05D005283 ORTHO05D006769 3.0e-45 187.6 203 45.3
unitig_748.g8731 Utricularia gibba HOM05D005283 ORTHO05D006769 3.0e-45 187.6 200 46.0
ATR0796G268 Amborella trichopoda HOM05D005283 ORTHO05D006769 3.9e-45 187.2 252 41.7
FAN12G1245 Fragaria x ananassa HOM05D005283 ORTHO05D006769 3.9e-45 187.2 203 46.3
Medtr4g119960 Medicago truncatula HOM05D005283 ORTHO05D006769 3.9e-45 187.2 199 46.7
TAR633G1039 Trochodendron aralioides HOM05D005283 ORTHO05D006769 3.9e-45 187.2 263 41.8
FvH4_4g18240 Fragaria vesca HOM05D005283 ORTHO05D006769 5.0e-45 186.8 203 46.3
Peaxi162Scf01123g00233 Petunia axillaris HOM05D005283 ORTHO05D006769 5.0e-45 186.8 500 30.0
Sed0007600 Sechium edule HOM05D005283 ORTHO05D006769 5.0e-45 186.8 227 44.5
VMungo1215G0467 Vigna mungo HOM05D005283 ORTHO05D006769 5.0e-45 186.8 203 44.8
Haze_01194 Corylus avellana HOM05D005283 ORTHO05D006769 6.6e-45 186.4 224 43.8
RcHm_v2.0_Chr4g0422381 Rosa chinensis HOM05D005283 ORTHO05D006769 6.6e-45 186.4 203 45.3
Cc03_g01850 Coffea canephora HOM05D005283 ORTHO05D006769 8.6e-45 186.0 317 37.2
FAN12G0573 Fragaria x ananassa HOM05D005283 ORTHO05D006769 8.6e-45 186.0 203 45.8
PSO170G5664 Papaver somniferum HOM05D005283 ORTHO05D006769 8.6e-45 186.0 293 40.3
Potri.010G014000 Populus trichocarpa HOM05D005283 ORTHO05D006769 8.6e-45 186.0 505 28.9
MD08G1066800 Malus domestica HOM05D005283 ORTHO05D006769 1.1e-44 185.7 255 42.4
HPP92_002145 Vanilla planifolia HOM05D005283 ORTHO05D006769 1.1e-44 185.7 208 47.6
Cfa015392 Carpinus fangiana HOM05D005283 ORTHO05D006769 2.5e-44 184.5 304 38.2
TWI09G0775 Tripterygium wilfordii HOM05D005283 ORTHO05D006769 2.5e-44 184.5 333 35.7
CAN.G185.38 Capsicum annuum HOM05D005283 ORTHO05D006769 3.3e-44 184.1 299 38.5
Ca_21491_v3 Cicer arietinum L. HOM05D005283 ORTHO05D006769 3.3e-44 184.1 482 29.9
Glyma.07G247100 Glycine max HOM05D005283 ORTHO05D006769 3.3e-44 184.1 313 36.4
TAR362G0604 Trochodendron aralioides HOM05D005283 ORTHO05D006769 3.3e-44 184.1 261 40.6
Aqoxy2G02976 Aquilegia oxysepala HOM05D005283 ORTHO05D006769 4.3e-44 183.7 223 43.5
CSS0043341 Camellia sinensis var. sinensis HOM05D005283 ORTHO05D006769 4.3e-44 183.7 308 37.7
Dinv29746 Davidia involucrata HOM05D005283 ORTHO05D006769 4.3e-44 183.7 301 38.5
Phvul.003G105900 Phaseolus vulgaris HOM05D005283 ORTHO05D006769 5.6e-44 183.3 221 42.5
Psat4g027360 Pisum sativum HOM05D005283 ORTHO05D006769 7.3e-44 183.0 199 46.2
Lj4g0026758 Lotus japonicus HOM05D005283 ORTHO05D006769 9.5e-44 182.6 258 40.3
TPR.G3193 Trifolium pratense HOM05D005283 ORTHO05D006769 9.5e-44 182.6 199 46.2
Lalb_Chr18g0051671 Lupinus albus HOM05D005283 ORTHO05D006769 1.2e-43 182.2 203 45.3
CiPaw.01G148000 Carya illinoinensis HOM05D005283 ORTHO05D006769 2.1e-43 181.4 217 43.8
CsaV3_3G014700 Cucumis sativus L. HOM05D005283 ORTHO05D006769 2.1e-43 181.4 297 37.4
Actinidia40274 Actinidia chinensis HOM05D005283 ORTHO05D006769 2.8e-43 181.0 246 41.1
arahy.Tifrunner.gnm1.ann1.Z6JJZG Arachis hypogaea HOM05D005283 ORTHO05D006769 4.7e-43 180.3 488 28.1
arahy.Tifrunner.gnm1.ann1.PZAP36 Arachis hypogaea HOM05D005283 ORTHO05D006769 6.2e-43 179.9 488 28.1
Ciclev10004285m.g Citrus clementina HOM05D005283 ORTHO05D006769 6.2e-43 179.9 483 28.8
ECA240G0403 Erigeron canadensis HOM05D005283 ORTHO05D006769 1.5e-41 175.3 283 38.2
vmacro08159 Vaccinium macrocarpon HOM05D005283 ORTHO05D006769 7.5e-41 172.9 255 38.8
MELO3C006668.2 Cucumis melo HOM05D005283 ORTHO05D006769 6.4e-40 169.9 318 36.2
PRCOL_00005501 Prasinoderma coloniale HOM05D005283 ORTHO05D006769 8.3e-40 169.5 359 30.4
Lj6C677T9 Lonicera japonica HOM05D005283 ORTHO05D006769 1.6e-38 165.2 338 34.3
CDE05G1280 Ceratophyllum demersum HOM05D005283 ORTHO05D006769 6.0e-38 163.3 231 42.4
Zm00001eb363540 Zea mays HOM05D005283 ORTHO05D006769 1.3e-37 162.2 364 32.1
Eucgr.B01324 Eucalyptus grandis HOM05D005283 ORTHO05D006769 8.6e-37 159.5 444 28.6
Oeu029706.1 Olea europaea HOM05D005283 ORTHO05D000116 2.1e-35 154.8 209 41.6
Nitab4.5_0000059g0420 Nicotiana tabacum HOM05D005283 ORTHO05D006769 8.1e-35 152.9 299 34.8
Rhsim04G0223000 Rhododendron simsii HOM05D005283 ORTHO05D006769 2.4e-34 151.4 298 32.6
Hma1.2p1_2906F.1_g330120 Hydrangea macrophylla HOM05D005283 ORTHO05D006769 8.9e-34 149.4 318 33.3
Sabra10G0008900 Salix brachista HOM05D005283 ORTHO05D006769 8.4e-32 142.9 169 45.6
SEGI_24032 Sequoiadendron giganteum HOM05D005283 ORTHO05D006769 1.4e-23 115.5 117 47.9
COL.COLO4_13862 Corchorus olitorius HOM05D005283 ORTHO05D006769 2.7e-22 111.3 208 33.7
Actinidia26773 Actinidia chinensis HOM05D005283 ORTHO05D006769 2.8e-19 101.3 193 36.8
MCO04G464 Micromonas commoda HOM05D005283 ORTHO05D006769 4.8e-19 100.5 290 27.6


User provided reference genes

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