Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_35599 Sequoiadendron giganteum HOM05D007591 ORTHO05D009564 3.1e-54 214.9 112 100.0
Potri.004G068400 Populus trichocarpa HOM05D007591 ORTHO05D009564 6.5e-20 100.9 114 53.5
Sabra04G0046100 Salix brachista HOM05D007591 ORTHO05D009564 2.1e-18 95.9 111 52.3
Aa31LG6G9200 Aethionema arabicum HOM05D007591 ORTHO05D009564 8.0e-18 94.0 120 51.7
ATR0807G077 Amborella trichopoda HOM05D007591 ORTHO05D009564 8.0e-18 94.0 123 46.3
Gohir.A02G020402 Gossypium hirsutum HOM05D007591 ORTHO05D009564 8.0e-18 94.0 117 52.1
Mapoly0020s0124 Marchantia polymorpha HOM05D007591 ORTHO05D009564 8.0e-18 94.0 133 48.9
SHI12607 Sapria himalayana HOM05D007591 ORTHO05D009564 8.0e-18 94.0 114 53.5
Sc10g0009060 Simmondsia chinensis HOM05D007591 ORTHO05D009564 8.0e-18 94.0 112 50.0
Duzib091G0002 Durio zibethinus HOM05D007591 ORTHO05D009564 1.8e-17 92.8 116 54.3
Gohir.D02G024000 Gossypium hirsutum HOM05D007591 ORTHO05D009564 3.0e-17 92.0 117 51.3
Gorai.005G030000 Gossypium raimondii HOM05D007591 ORTHO05D009564 3.0e-17 92.0 117 51.3
MBI06_g28831_MAGBIO Magnolia biondii HOM05D007591 ORTHO05D009564 6.7e-17 90.9 118 48.3
Pp3c23_22030 Physcomitrium patens HOM05D007591 ORTHO05D009564 6.7e-17 90.9 115 48.7
Carub.0001s3401 Capsella rubella HOM05D007591 ORTHO05D009564 8.8e-17 90.5 113 51.3
Thhalv10011878m.g Eutrema salsugineum HOM05D007591 ORTHO05D009564 8.8e-17 90.5 115 48.7
CiPaw.16G070000 Carya illinoinensis HOM05D007591 ORTHO05D009564 1.5e-16 89.7 127 45.7
Nn3g18513 Nelumbo nucifera HOM05D007591 ORTHO05D009564 2.0e-16 89.4 119 50.4
MSTRG.23207 Avicennia marina HOM05D007591 ORTHO05D009564 2.6e-16 89.0 116 49.1
Sopen03g029150 Solanum pennellii HOM05D007591 ORTHO05D009564 3.3e-16 88.6 118 50.8
Dinv01404 Davidia involucrata HOM05D007591 ORTHO05D009564 4.4e-16 88.2 124 45.2
Solyc03g098410.1 Solanum lycopersicum HOM05D007591 ORTHO05D009564 4.4e-16 88.2 118 50.0
PGSC0003DMG400010159 Solanum tuberosum HOM05D007591 ORTHO05D009564 7.5e-16 87.4 118 50.0
AL4G17330 Arabidopsis lyrata HOM05D007591 ORTHO05D009564 1.3e-15 86.7 115 47.0
SpUn0008_0030 Schrenkiella parvula HOM05D007591 ORTHO05D009564 1.3e-15 86.7 118 45.8
Haze_18422 Corylus avellana HOM05D007591 ORTHO05D009564 1.7e-15 86.3 129 49.6
Nitab4.5_0004612g0010 Nicotiana tabacum HOM05D007591 ORTHO05D009564 2.2e-15 85.9 119 47.9
Oeu001600.1 Olea europaea HOM05D007591 ORTHO05D009564 2.2e-15 85.9 115 48.7
TAR622G1019 Trochodendron aralioides HOM05D007591 ORTHO05D009564 2.8e-15 85.5 120 47.5
Thecc.04G198100 Theobroma cacao HOM05D007591 ORTHO05D009564 4.8e-15 84.7 119 51.3
HPP92_005097 Vanilla planifolia HOM05D007591 ORTHO05D009564 4.8e-15 84.7 121 50.4
BcaB06g27212 Brassica carinata HOM05D007591 ORTHO05D009564 1.1e-14 83.6 120 45.8
C04p45070 Brassica napus HOM05D007591 ORTHO05D009564 1.1e-14 83.6 121 46.3
BolC4t26085H Brassica oleracea HOM05D007591 ORTHO05D009564 1.1e-14 83.6 121 46.3
Peaxi162Scf00171g00034 Petunia axillaris HOM05D007591 ORTHO05D009564 1.1e-14 83.6 126 46.0
CAN.G1909.5 Capsicum annuum HOM05D007591 ORTHO05D009564 1.4e-14 83.2 118 44.9
Nitab4.5_0001180g0270 Nicotiana tabacum HOM05D007591 ORTHO05D009564 1.4e-14 83.2 120 43.3
Psat0s3092g0040 Pisum sativum HOM05D007591 ORTHO05D009564 1.4e-14 83.2 118 44.9
CARHR134910 Cardamine hirsuta HOM05D007591 ORTHO05D009564 1.8e-14 82.8 117 44.4
Cpa.g.sc36.38 Carica papaya HOM05D007591 ORTHO05D009564 1.8e-14 82.8 120 47.5
TWI15G0768 Tripterygium wilfordii HOM05D007591 ORTHO05D009564 1.8e-14 82.8 115 45.2
Ah.09g232230 Amaranthus hybridus HOM05D007591 ORTHO05D009564 2.4e-14 82.4 112 46.4
Cc04_g08740 Coffea canephora HOM05D007591 ORTHO05D009564 2.4e-14 82.4 118 44.9
THA.LOC104817210 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 5.3e-14 81.3 127 43.3
AT2G25720 Arabidopsis thaliana HOM05D007591 ORTHO05D009564 1.2e-13 80.1 118 44.9
EL10Ac8g19512 Beta vulgaris HOM05D007591 ORTHO05D009564 2.0e-13 79.3 116 45.7
A04p11310 Brassica napus HOM05D007591 ORTHO05D009564 2.0e-13 79.3 122 44.3
BraA04t16792Z Brassica rapa HOM05D007591 ORTHO05D009564 2.0e-13 79.3 122 44.3
Migut.O00251 Erythranthe guttata HOM05D007591 ORTHO05D009564 2.0e-13 79.3 116 46.6
SalBow5G5001 Salvia bowleyana HOM05D007591 ORTHO05D009564 3.5e-13 78.6 116 44.8
QL07p035218 Quercus lobata HOM05D007591 ORTHO05D009564 7.7e-13 77.4 128 40.6
PGR083G0752 Punica granatum HOM05D007591 ORTHO05D009564 1.0e-12 77.0 122 42.6
FvH4_5g18200 Fragaria vesca HOM05D007591 ORTHO05D009564 1.3e-12 76.6 128 46.9
Sed0023620 Sechium edule HOM05D007591 ORTHO05D009564 1.3e-12 76.6 121 45.5
Ca_25920_v3 Cicer arietinum L. HOM05D007591 ORTHO05D009564 1.7e-12 76.3 119 42.0
Manes.02G219300 Manihot esculenta HOM05D007591 ORTHO05D009564 1.7e-12 76.3 119 45.4
Actinidia35144 Actinidia chinensis HOM05D007591 ORTHO05D009564 2.9e-12 75.5 127 40.2
COL.COLO4_20200 Corchorus olitorius HOM05D007591 ORTHO05D009564 2.9e-12 75.5 116 47.4
CsaV3_1G005150 Cucumis sativus L. HOM05D007591 ORTHO05D009564 2.9e-12 75.5 119 45.4
Atru.chr9.1591 Acer truncatum HOM05D007591 ORTHO05D009564 3.8e-12 75.1 130 43.1
Eucgr.H00568 Eucalyptus grandis HOM05D007591 ORTHO05D009564 3.8e-12 75.1 135 40.0
PSO063G6315 Papaver somniferum HOM05D007591 ORTHO05D009564 3.8e-12 75.1 130 44.6
Glyma.08G057500 Glycine max HOM05D007591 ORTHO05D009564 6.5e-12 74.3 130 40.0
Aqoxy3G04178 Aquilegia oxysepala HOM05D007591 ORTHO05D009564 1.5e-11 73.2 125 44.0
arahy.Tifrunner.gnm1.ann1.T0CPW9 Arachis hypogaea HOM05D007591 ORTHO05D009564 2.5e-11 72.4 117 42.7
FAN04G1638 Fragaria x ananassa HOM05D007591 ORTHO05D009564 2.5e-11 72.4 118 43.2
CSS0020209 Camellia sinensis var. sinensis HOM05D007591 ORTHO05D009564 3.2e-11 72.0 133 40.6
Phvul.002G333300 Phaseolus vulgaris HOM05D007591 ORTHO05D009564 3.2e-11 72.0 132 39.4
DCAR_014000 Daucus carota HOM05D007591 ORTHO05D009564 4.2e-11 71.6 120 44.2
MELO3C001953.2 Cucumis melo HOM05D007591 ORTHO05D009564 9.4e-11 70.5 119 42.0
AUR62008565 Chenopodium quinoa HOM05D007591 ORTHO05D009564 1.2e-10 70.1 110 40.0
AUR62033202 Chenopodium quinoa HOM05D007591 ORTHO05D009564 1.6e-10 69.7 110 40.0
FAN18G3921 Fragaria x ananassa HOM05D007591 ORTHO05D009564 1.6e-10 69.7 130 40.0
Zm00001eb429080 Zea mays HOM05D007591 ORTHO05D009564 2.1e-10 69.3 127 42.5
Medtr6g036570 Medicago truncatula HOM05D007591 ORTHO05D009564 2.7e-10 68.9 118 39.8
ECA234G2981 Erigeron canadensis HOM05D007591 ORTHO05D009564 3.6e-10 68.6 126 40.5
FAN13G0294 Fragaria x ananassa HOM05D007591 ORTHO05D009564 3.6e-10 68.6 124 44.4
ClCG04G012550 Citrullus lanatus HOM05D007591 ORTHO05D009564 4.7e-10 68.2 117 41.9
RcHm_v2.0_Chr7g0177391 Rosa chinensis HOM05D007591 ORTHO05D009564 8.0e-10 67.4 133 42.1
unitig_22.g5435 Utricularia gibba HOM05D007591 ORTHO05D009564 1.0e-09 67.0 107 44.9
Ciclev10022902m.g Citrus clementina HOM05D007591 ORTHO05D009564 1.8e-09 66.2 121 41.3
Lsat_1_v5_gn_4_52441 Lactuca sativa HOM05D007591 ORTHO05D009564 1.8e-09 66.2 130 37.7
HanXRQChr17g0560331 Helianthus annuus HOM05D007591 ORTHO05D009564 2.3e-09 65.9 125 42.4
LjContig00484g0016765 Lotus japonicus HOM05D007591 ORTHO05D009564 2.3e-09 65.9 128 39.1
Lalb_Chr05g0221361 Lupinus albus HOM05D007591 ORTHO05D009564 3.0e-09 65.5 128 40.6
Prupe.5G241900 Prunus persica HOM05D007591 ORTHO05D009564 4.0e-09 65.1 127 41.7
Hma1.2p1_1404F.1_g281340 Hydrangea macrophylla HOM05D007591 ORTHO05D009564 5.2e-09 64.7 128 38.3
SpUn0123_0020 Schrenkiella parvula HOM05D007591 ORTHO05D009564 5.2e-09 64.7 69 47.8
CDE07G1474 Ceratophyllum demersum HOM05D007591 ORTHO05D009564 1.5e-08 63.2 101 44.6
MD14G1244400 Malus domestica HOM05D007591 ORTHO05D009564 3.4e-08 62.0 126 39.7
Os04g0566000 Oryza sativa ssp. japonica HOM05D007591 ORTHO05D009564 9.8e-08 60.5 46 65.2
Medtr6g036573 Medicago truncatula HOM05D007591 ORTHO05D009564 2.2e-07 59.3 40 65.0
Rhsim12G0136500 Rhododendron simsii HOM05D007591 ORTHO05D009564 2.8e-07 58.9 126 36.5
arahy.Tifrunner.gnm1.ann1.B1XHC0 Arachis hypogaea HOM05D007591 ORTHO05D009564 3.7e-07 58.5 119 37.8
CBR_g12703 Chara braunii HOM05D007591 ORTHO05D009564 1.4e-06 56.6 122 40.2
THA.LOC104813140 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 1.4e-06 56.6 57 49.1


User provided reference genes

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