Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_35519 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 2.6e-311 1071.2 546 100.0
SEGI_14875 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 1.5e-194 683.3 457 77.0
SEGI_03134 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 4.1e-192 675.2 454 74.7
SEGI_34368 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 2.0e-162 576.6 384 76.8
CDE06G1141 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 3.7e-100 369.8 435 43.9
Nn1g03213 Nelumbo nucifera HOM05D005756 ORTHO05D007991 2.0e-98 364.0 430 46.0
TAR629G3088 Trochodendron aralioides HOM05D005756 ORTHO05D007991 2.0e-98 364.0 430 45.6
MD09G1126000 Malus domestica HOM05D005756 ORTHO05D007991 1.6e-95 354.4 426 44.8
FvH4_6g40720 Fragaria vesca HOM05D005756 ORTHO05D007991 1.7e-92 344.4 431 42.5
GSVIVG01030075001 Vitis vinifera HOM05D005756 ORTHO05D007991 2.2e-92 344.0 436 42.9
FAN14G2144 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.8e-91 340.9 431 42.2
RcHm_v2.0_Chr2g0156171 Rosa chinensis HOM05D005756 ORTHO05D007991 3.1e-91 340.1 425 41.6
CsaV3_6G009540 Cucumis sativus L. HOM05D005756 ORTHO05D007991 5.3e-91 339.3 462 41.1
FAN05G2330 Fragaria x ananassa HOM05D005756 ORTHO05D007991 5.3e-91 339.3 426 43.0
Gorai.001G221400 Gossypium raimondii HOM05D005756 ORTHO05D007991 2.6e-90 337.0 434 42.6
Sc21g0000630 Simmondsia chinensis HOM05D005756 ORTHO05D007991 4.5e-90 336.3 431 41.8
Prupe.3G198700 Prunus persica HOM05D005756 ORTHO05D007991 7.7e-90 335.5 432 43.8
Actinidia18810 Actinidia chinensis HOM05D005756 ORTHO05D007991 1.7e-89 334.3 434 43.3
CSS0006225 Camellia sinensis var. sinensis HOM05D005756 ORTHO05D007991 1.7e-89 334.3 430 42.3
MELO3C025971.2 Cucumis melo HOM05D005756 ORTHO05D007991 2.2e-89 334.0 434 41.9
ClCG02G009290 Citrullus lanatus HOM05D005756 ORTHO05D007991 2.9e-89 333.6 434 42.4
Sed0018608 Sechium edule HOM05D005756 ORTHO05D007991 6.5e-89 332.4 437 41.4
FAN09G1647 Fragaria x ananassa HOM05D005756 ORTHO05D007991 8.5e-89 332.0 426 41.5
Gohir.A07G191400 Gossypium hirsutum HOM05D005756 ORTHO05D007991 2.5e-88 330.5 426 42.5
Duzib211G0508 Durio zibethinus HOM05D005756 ORTHO05D007991 3.2e-88 330.1 426 42.7
Duzib133G1068 Durio zibethinus HOM05D005756 ORTHO05D007991 9.4e-88 328.6 426 43.4
Thecc.01G193500 Theobroma cacao HOM05D005756 ORTHO05D007991 9.4e-88 328.6 429 42.2
Peaxi162Scf00218g00178 Petunia axillaris HOM05D005756 ORTHO05D007991 2.7e-87 327.0 451 41.0
Sed0020254 Sechium edule HOM05D005756 ORTHO05D007991 3.6e-87 326.6 435 40.9
Oeu021293.1 Olea europaea HOM05D005756 ORTHO05D007991 4.7e-87 326.2 429 41.0
SalBow1G0676 Salvia bowleyana HOM05D005756 ORTHO05D007991 4.7e-87 326.2 429 39.9
ATR0624G001 Amborella trichopoda HOM05D005756 ORTHO05D007991 1.0e-86 325.1 450 40.0
AL7G44670 Arabidopsis lyrata HOM05D005756 ORTHO05D007991 1.4e-86 324.7 429 40.1
Sabra14G0126700 Salix brachista HOM05D005756 ORTHO05D007991 1.8e-86 324.3 429 42.4
Migut.J01345 Erythranthe guttata HOM05D005756 ORTHO05D007991 2.3e-86 323.9 448 40.4
Gohir.D07G171500 Gossypium hirsutum HOM05D005756 ORTHO05D007991 2.3e-86 323.9 425 40.9
Aqoxy4G02252 Aquilegia oxysepala HOM05D005756 ORTHO05D007991 3.9e-86 323.2 444 43.2
CAN.G60.7 Capsicum annuum HOM05D005756 ORTHO05D007991 3.9e-86 323.2 450 40.2
Gohir.A07G164300 Gossypium hirsutum HOM05D005756 ORTHO05D007991 3.9e-86 323.2 425 40.7
Ciclev10018016m.g Citrus clementina HOM05D005756 ORTHO05D007991 6.7e-86 322.4 438 42.9
COL.COLO4_33341 Corchorus olitorius HOM05D005756 ORTHO05D007991 6.7e-86 322.4 427 41.7
AT5G35770 Arabidopsis thaliana HOM05D005756 ORTHO05D007991 8.8e-86 322.0 429 40.1
Gorai.001G191800 Gossypium raimondii HOM05D005756 ORTHO05D007991 8.8e-86 322.0 425 40.7
PSO675G1451 Papaver somniferum HOM05D005756 ORTHO05D007991 1.5e-85 321.2 464 40.5
Potri.014G166400 Populus trichocarpa HOM05D005756 ORTHO05D007991 1.5e-85 321.2 429 43.1
Actinidia35206 Actinidia chinensis HOM05D005756 ORTHO05D007991 2.0e-85 320.9 429 41.0
PSO541G4672 Papaver somniferum HOM05D005756 ORTHO05D007991 2.0e-85 320.9 464 40.7
Peaxi162Scf00802g00236 Petunia axillaris HOM05D005756 ORTHO05D007991 2.0e-85 320.9 439 39.9
Manes.12G064800 Manihot esculenta HOM05D005756 ORTHO05D007991 3.3e-85 320.1 435 41.8
Nitab4.5_0000006g0690 Nicotiana tabacum HOM05D005756 ORTHO05D007991 5.7e-85 319.3 439 40.3
Haze_12636 Corylus avellana HOM05D005756 ORTHO05D007991 7.4e-85 318.9 429 40.3
Aa31sc373G50 Aethionema arabicum HOM05D005756 ORTHO05D007991 2.8e-84 317.0 430 38.4
Nitab4.5_0010487g0010 Nicotiana tabacum HOM05D005756 ORTHO05D007991 2.8e-84 317.0 439 39.9
Oeu052200.1 Olea europaea HOM05D005756 ORTHO05D007991 3.7e-84 316.6 498 38.4
THA.LOC104815437 Tarenaya hassleriana HOM05D005756 ORTHO05D007991 3.7e-84 316.6 436 39.0
SalBow1G7885 Salvia bowleyana HOM05D005756 ORTHO05D007991 4.8e-84 316.2 426 41.1
Sp7g06350 Schrenkiella parvula HOM05D005756 ORTHO05D007991 1.4e-83 314.7 432 40.5
ECA236G0821 Erigeron canadensis HOM05D005756 ORTHO05D007991 1.8e-83 314.3 430 39.3
BcaB06g26996 Brassica carinata HOM05D005756 ORTHO05D007991 3.1e-83 313.5 474 38.2
Carub.0007s3155 Capsella rubella HOM05D005756 ORTHO05D007991 3.1e-83 313.5 429 39.2
MD17G1116000 Malus domestica HOM05D005756 ORTHO05D007991 5.3e-83 312.8 389 43.2
CiPaw.03G281000 Carya illinoinensis HOM05D005756 ORTHO05D007991 6.9e-83 312.4 428 40.9
AUR62015018 Chenopodium quinoa HOM05D005756 ORTHO05D007991 6.9e-83 312.4 445 39.6
QL08p028191 Quercus lobata HOM05D005756 ORTHO05D007991 9.1e-83 312.0 460 41.5
BcaC02g09499 Brassica carinata HOM05D005756 ORTHO05D007991 1.5e-82 311.2 474 38.0
Migut.K00325 Erythranthe guttata HOM05D005756 ORTHO05D007991 2.0e-82 310.8 431 41.5
vmacro09483 Vaccinium macrocarpon HOM05D005756 ORTHO05D007991 4.5e-82 309.7 400 40.8
Solyc05g041220.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 5.9e-82 309.3 440 39.8
BolC4t25929H Brassica oleracea HOM05D005756 ORTHO05D007991 7.7e-82 308.9 474 37.8
Rhsim04G0027400 Rhododendron simsii HOM05D005756 ORTHO05D007991 7.7e-82 308.9 465 37.8
A04p10010 Brassica napus HOM05D005756 ORTHO05D007991 1.3e-81 308.1 474 37.8
BraA04t16663Z Brassica rapa HOM05D005756 ORTHO05D007991 1.3e-81 308.1 474 37.8
Gohir.D07G197700 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.3e-81 308.1 391 42.2
C04p43490 Brassica napus HOM05D005756 ORTHO05D007991 2.9e-81 307.0 474 37.6
Nitab4.5_0005267g0030 Nicotiana tabacum HOM05D005756 ORTHO05D007991 3.8e-81 306.6 394 40.4
PGR042G1143 Punica granatum HOM05D005756 ORTHO05D007991 5.0e-81 306.2 426 40.8
Manes.13G062400 Manihot esculenta HOM05D005756 ORTHO05D007991 8.5e-81 305.4 439 40.8
Ah.01g013810 Amaranthus hybridus HOM05D005756 ORTHO05D007991 1.9e-80 304.3 448 38.6
Lsat_1_v5_gn_7_97180 Lactuca sativa HOM05D005756 ORTHO05D007991 1.9e-80 304.3 436 38.5
HanXRQChr11g0328881 Helianthus annuus HOM05D005756 ORTHO05D007991 7.2e-80 302.4 441 37.9
SMO364G0494 Selaginella moellendorffii HOM05D005756 ORTHO05D007991 9.4e-80 302.0 446 39.2
Hma1.2p1_0545F.1_g176030 Hydrangea macrophylla HOM05D005756 ORTHO05D007991 1.2e-79 301.6 393 41.7
CANSAT64G2821 Cannabis sativa HOM05D005756 ORTHO05D007991 3.0e-78 297.0 426 39.2
Eucgr.A01028 Eucalyptus grandis HOM05D005756 ORTHO05D007991 1.7e-76 291.2 390 39.5
Cc00_g15460 Coffea canephora HOM05D005756 ORTHO05D007991 2.8e-76 290.4 401 39.7
Oeu027646.1 Olea europaea HOM05D005756 ORTHO05D007991 1.1e-75 288.5 400 38.8
Solyc07g045550.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 2.0e-74 284.3 394 38.6
DCAR_019686 Daucus carota HOM05D005756 ORTHO05D001984 2.6e-74 283.9 420 39.0
Thhalv10005699m.g Eutrema salsugineum HOM05D005756 ORTHO05D007991 5.9e-74 282.7 395 39.2
unitig_0.g2684 Utricularia gibba HOM05D005756 ORTHO05D007991 5.9e-74 282.7 403 39.5
Lj1C795T0 Lonicera japonica HOM05D005756 ORTHO05D007991 1.3e-73 281.6 391 39.9
EL10Ac9g22689 Beta vulgaris HOM05D005756 ORTHO05D007991 1.5e-72 278.1 406 39.2
Dinv26618 Davidia involucrata HOM05D005756 ORTHO05D007991 7.2e-72 275.8 431 38.3
SHI10154 Sapria himalayana HOM05D005756 ORTHO05D007991 3.6e-71 273.5 499 34.5
HanXRQChr04g0126551 Helianthus annuus HOM05D005756 ORTHO05D007991 1.0e-70 271.9 393 37.4
HPP92_014030 Vanilla planifolia HOM05D005756 ORTHO05D007991 9.7e-69 265.4 433 38.1
SGA_v2.0_scaffold265G46105 Striga asiatica HOM05D005756 ORTHO05D007991 2.8e-68 263.8 427 37.5
HPP92_028362 Vanilla planifolia HOM05D005756 ORTHO05D007991 6.3e-68 262.7 433 37.6
Medtr5g097060 Medicago truncatula HOM05D005756 ORTHO05D007991 3.1e-67 260.4 445 38.2
TPR.G1270 Trifolium pratense HOM05D005756 ORTHO05D007991 3.1e-67 260.4 451 37.0
CARHR216780 Cardamine hirsuta HOM05D005756 ORTHO05D007991 1.2e-66 258.5 359 38.4
Glyma.02G304600 Glycine max HOM05D005756 ORTHO05D007991 3.5e-66 256.9 437 36.8
PGSC0003DMG400018834 Solanum tuberosum HOM05D005756 ORTHO05D007991 7.7e-66 255.8 391 37.1
Psat2g005040 Pisum sativum HOM05D005756 ORTHO05D007991 5.0e-65 253.1 448 37.1
TWI18G0016 Tripterygium wilfordii HOM05D005756 ORTHO05D007991 6.5e-65 252.7 443 34.5
arahy.Tifrunner.gnm1.ann1.5EZV1I Arachis hypogaea HOM05D005756 ORTHO05D007991 8.5e-65 252.3 344 42.2
arahy.Tifrunner.gnm1.ann1.P22I4F Arachis hypogaea HOM05D005756 ORTHO05D007991 1.1e-64 251.9 344 42.2
CDE04G3001 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 1.1e-64 251.9 433 34.4
Lalb_Chr10g0107581 Lupinus albus HOM05D005756 ORTHO05D007991 2.1e-63 247.7 426 36.4
LjContig00081g0010185 Lotus japonicus HOM05D005756 ORTHO05D007991 8.0e-63 245.7 441 37.4
Phvul.008G284100 Phaseolus vulgaris HOM05D005756 ORTHO05D007991 2.3e-62 244.2 337 41.2
Atru.chr6.3377 Acer truncatum HOM05D005756 ORTHO05D007991 6.8e-62 242.7 286 46.5
SGA_v2.0_scaffold12G05997 Striga asiatica HOM05D005756 ORTHO05D007991 2.6e-61 240.7 397 36.8
Cpa.g.sc211.22 Carica papaya HOM05D005756 ORTHO05D007991 2.2e-60 237.7 322 40.7
CANSAT64G2382 Cannabis sativa HOM05D005756 ORTHO05D007991 4.1e-59 233.4 278 45.0
VMungo0647G0888 Vigna mungo HOM05D005756 ORTHO05D007991 2.7e-58 230.7 435 36.1
Ca_06445_v3 Cicer arietinum L. HOM05D005756 ORTHO05D007991 8.0e-55 219.2 417 36.9
Sopen05g025200 Solanum pennellii HOM05D005756 ORTHO05D000001 8.0e-55 219.2 419 35.1
unitig_748.g7200 Utricularia gibba HOM05D005756 ORTHO05D007991 2.2e-52 211.1 420 35.0
Oeu032118.1 Olea europaea HOM05D005756 ORTHO05D007991 7.3e-48 196.1 250 44.4
AUR62029095 Chenopodium quinoa HOM05D005756 ORTHO05D007991 2.6e-45 187.6 277 37.5
Glyma.14G009200 Glycine max HOM05D005756 ORTHO05D007991 2.9e-44 184.1 360 33.3
Gohir.D11G156320 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.2e-42 178.7 362 35.6
SEGI_18115 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 5.4e-35 153.3 98 78.6
Dinv21286 Davidia involucrata HOM05D005756 ORTHO05D007991 8.9e-30 136.0 278 32.0
MBI19_g37437_MAGBIO Magnolia biondii HOM05D005756 ORTHO05D007991 8.9e-22 109.4 148 41.9
SGA_v2.0_scaffold12G05995 Striga asiatica HOM05D002374 ORTHO05D406151 1.6e-15 88.6 153 38.6
SEGI_03720 Sequoiadendron giganteum HOM05D005756 ORTHO05D386902 4.4e-13 80.5 63 68.3
SEGI_13443 Sequoiadendron giganteum HOM05D000415 ORTHO05D386357 1.4e-06 58.9 48 64.6
Sc21g0000680 Simmondsia chinensis HOM05D005756 ORTHO05D018916 2.4e-06 58.2 43 65.1


User provided reference genes

Program Settings