Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 5.6e-133 477.6 246 100.0
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 5.2e-62 241.9 253 59.3
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 1.8e-59 233.4 252 57.1
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 3.9e-57 225.7 257 55.3
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 5.6e-56 221.9 254 53.1
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 4.0e-54 215.7 252 54.8
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 4.0e-54 215.7 252 55.2
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 8.9e-54 214.5 261 52.9
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 3.4e-53 212.6 260 52.3
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 4.4e-53 212.2 258 52.3
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 4.4e-53 212.2 256 52.0
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 9.8e-53 211.1 274 51.1
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 9.8e-53 211.1 260 54.6
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 9.8e-53 211.1 260 55.0
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 1.7e-52 210.3 259 52.9
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 1.7e-52 210.3 259 52.9
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 3.7e-52 209.1 199 60.3
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 4.9e-52 208.8 250 53.6
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 1.1e-51 207.6 256 52.7
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 1.1e-51 207.6 259 52.9
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 2.4e-51 206.5 259 51.7
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 5.4e-51 205.3 259 51.4
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 4.6e-50 202.2 258 51.9
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 7.8e-50 201.4 253 52.2
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 7.8e-50 201.4 194 61.3
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 1.3e-49 200.7 252 50.8
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 1.7e-49 200.3 258 51.6
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 1.7e-49 200.3 264 50.8
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 2.3e-49 199.9 253 50.2
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 3.0e-49 199.5 258 50.8
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 1.1e-48 197.6 260 48.8
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 1.1e-48 197.6 263 51.0
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 1.5e-48 197.2 256 52.0
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 1.9e-48 196.8 257 48.6
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 5.6e-48 195.3 280 48.6
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 1.6e-47 193.7 252 49.6
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 3.6e-47 192.6 200 57.5
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 4.7e-47 192.2 253 49.0
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 6.2e-47 191.8 258 50.8
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 6.2e-47 191.8 255 51.4
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 8.1e-47 191.4 258 49.2
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 1.1e-46 191.0 252 50.0
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 1.4e-46 190.7 202 57.9
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 1.4e-46 190.7 251 50.2
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 1.4e-46 190.7 261 48.7
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 1.8e-46 190.3 256 48.8
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 1.8e-46 190.3 268 49.3
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 2.3e-46 189.9 252 47.6
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 4.0e-46 189.1 251 50.2
Mapoly0096s0033 Marchantia polymorpha HOM05D005104 ORTHO05D006614 5.2e-46 188.7 266 47.7
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 6.8e-46 188.3 254 48.4
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 6.8e-46 188.3 265 48.3
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 8.9e-46 188.0 279 46.2
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 1.2e-45 187.6 248 51.6
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 1.5e-45 187.2 254 50.0
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 2.0e-45 186.8 271 48.3
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 2.0e-45 186.8 261 50.6
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 2.0e-45 186.8 256 50.8
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 2.0e-45 186.8 259 49.8
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 2.0e-45 186.8 251 50.6
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 3.4e-45 186.0 257 48.6
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 3.4e-45 186.0 254 49.6
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 5.8e-45 185.3 252 50.0
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 7.5e-45 184.9 261 48.3
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 7.5e-45 184.9 255 47.8
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 9.8e-45 184.5 254 50.8
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 9.8e-45 184.5 255 50.6
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 1.7e-44 183.7 247 47.0
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 2.2e-44 183.3 198 56.1
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 3.7e-44 182.6 259 48.3
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 4.9e-44 182.2 255 48.6
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 4.9e-44 182.2 252 48.8
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 8.3e-44 181.4 249 48.2
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 1.9e-43 180.3 247 47.0
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 5.4e-43 178.7 252 47.2
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 9.2e-43 177.9 260 48.1
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 9.2e-43 177.9 268 46.3
Zm00001eb194200 Zea mays HOM05D005104 ORTHO05D006614 9.2e-43 177.9 196 54.6
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 1.6e-42 177.2 250 49.2
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 1.6e-42 177.2 271 46.9
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 3.5e-42 176.0 250 48.8
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 7.8e-42 174.9 188 55.9
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 1.7e-41 173.7 250 48.4
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 1.7e-41 173.7 249 46.6
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 2.3e-41 173.3 250 48.4
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 2.3e-41 173.3 255 48.6
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 5.1e-41 172.2 269 45.4
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 1.9e-40 170.2 283 44.9
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 3.3e-40 169.5 303 46.2
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 5.6e-40 168.7 237 48.5
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 1.2e-39 167.5 250 47.6
MBI02_g08741_MAGBIO Magnolia biondii HOM05D005104 ORTHO05D006614 2.8e-39 166.4 140 68.6
Pp3c18_21190 Physcomitrium patens HOM05D005104 ORTHO05D006614 2.8e-39 166.4 254 45.3
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 8.1e-39 164.9 267 45.7
GSVIVG01013334001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.1e-38 164.5 141 64.5
Zm00001eb255190 Zea mays HOM05D005104 ORTHO05D006614 1.1e-38 164.5 266 45.1
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 1.8e-38 163.7 252 46.8
AagrBONN_evm.TU.Sc2ySwM_117.984 Anthoceros agrestis HOM05D005104 ORTHO05D006614 3.1e-38 162.9 251 45.8
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 3.1e-38 162.9 255 46.3
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 8.9e-38 161.4 239 46.9
GSVIVG01003087001 Vitis vinifera HOM05D005104 ORTHO05D006614 8.9e-38 161.4 141 63.1
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 1.5e-37 160.6 255 47.1
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 3.4e-37 159.5 239 46.4
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 7.6e-37 158.3 243 47.3
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 7.6e-37 158.3 236 47.0
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 1.3e-36 157.5 285 42.8
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 2.2e-36 156.8 243 47.3
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 2.2e-36 156.8 243 46.9
Lj5A240T40 Lonicera japonica HOM05D005104 ORTHO05D006614 4.9e-36 155.6 142 65.5
FAN24G3378 Fragaria x ananassa HOM05D005104 ORTHO05D006614 6.4e-36 155.2 139 62.6
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 8.4e-36 154.8 245 47.8
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 4.6e-34 149.1 249 43.8
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 2.5e-32 143.3 240 43.8
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 2.1e-31 140.2 207 46.9
GSVIVG01003093001 Vitis vinifera HOM05D005104 ORTHO05D006614 6.2e-31 138.7 123 62.6
SMO117G0229 Selaginella moellendorffii HOM05D005104 ORTHO05D006614 6.0e-26 122.1 197 44.7
Sc08g0003350 Simmondsia chinensis HOM05D005104 ORTHO05D006614 6.6e-25 118.6 140 51.4
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 1.6e-23 114.0 266 38.7
BolC4t25904H Brassica oleracea HOM05D005104 ORTHO05D006614 6.9e-22 108.6 73 76.7
EL10Ac9g21466 Beta vulgaris HOM05D005104 ORTHO05D006614 3.2e-19 99.8 73 69.9
CBR_g47116 Chara braunii HOM05D005104 ORTHO05D006614 1.2e-18 97.8 220 34.1
CDE10G1356 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 3.0e-17 93.2 184 41.3
unitig_22.g6836 Utricularia gibba HOM05D001058 ORTHO05D000911 1.6e-15 87.4 181 38.1
THA.LOC104818435 Tarenaya hassleriana HOM05D005104 ORTHO05D006614 9.0e-14 81.6 181 39.2
CAN.G1.36 Capsicum annuum HOM05D005104 ORTHO05D006614 1.7e-12 77.4 181 40.3
Nitab4.5_0005015g0050 Nicotiana tabacum HOM05D005104 ORTHO05D006614 4.9e-12 75.9 140 40.7
Duzib132G1169 Durio zibethinus HOM05D005104 ORTHO05D006614 1.3e-07 61.2 131 39.7
Hma1.2p1_0516F.1_g170490 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 1.1e-06 58.2 128 40.6


User provided reference genes

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