Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_35464 Sequoiadendron giganteum HOM05D002897 ORTHO05D007570 5.0e-81 304.3 144 100.0
Pp3c20_2790 Physcomitrium patens HOM05D002897 ORTHO05D007570 1.7e-36 156.4 116 65.5
ATR0829G043 Amborella trichopoda HOM05D002897 ORTHO05D007570 1.1e-35 153.7 111 62.2
CDE12G0398 Ceratophyllum demersum HOM05D002897 ORTHO05D007570 2.4e-35 152.5 144 54.9
Prupe.3G212500 Prunus persica HOM05D002897 ORTHO05D007570 2.3e-33 146.0 122 58.2
GSVIVG01030485001 Vitis vinifera HOM05D002897 ORTHO05D007570 6.6e-33 144.4 145 54.5
Nn1g01968 Nelumbo nucifera HOM05D002897 ORTHO05D007570 1.5e-32 143.3 144 51.4
PGR142G0275 Punica granatum HOM05D002897 ORTHO05D007570 1.9e-32 142.9 116 57.8
CSS0041861 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D007570 3.3e-32 142.1 117 57.3
Carub.0004s1398 Capsella rubella HOM05D002897 ORTHO05D007570 3.3e-32 142.1 123 55.3
SGA_v2.0_scaffold49G18347 Striga asiatica HOM05D002897 ORTHO05D007570 7.3e-32 141.0 125 56.0
Cfa014330 Carpinus fangiana HOM05D002897 ORTHO05D007570 9.5e-32 140.6 107 60.7
MD09G1112200 Malus domestica HOM05D002897 ORTHO05D007570 9.5e-32 140.6 107 60.7
Ciclev10017105m.g Citrus clementina HOM05D002897 ORTHO05D007570 1.2e-31 140.2 107 60.7
Thhalv10017400m.g Eutrema salsugineum HOM05D002897 ORTHO05D007570 1.6e-31 139.8 123 54.5
AL4G28050 Arabidopsis lyrata HOM05D002897 ORTHO05D007570 2.1e-31 139.4 126 54.0
CARHR126500 Cardamine hirsuta HOM05D002897 ORTHO05D007570 2.1e-31 139.4 111 59.5
ClCG02G002160 Citrullus lanatus HOM05D002897 ORTHO05D007570 2.1e-31 139.4 106 61.3
Cc05_g03210 Coffea canephora HOM05D002897 ORTHO05D007570 2.1e-31 139.4 112 58.0
CsaV3_7G003350 Cucumis sativus L. HOM05D002897 ORTHO05D007570 2.1e-31 139.4 121 53.7
Eucgr.K00770 Eucalyptus grandis HOM05D002897 ORTHO05D007570 2.1e-31 139.4 144 49.3
TAR624G0083 Trochodendron aralioides HOM05D002897 ORTHO05D007570 2.1e-31 139.4 110 59.1
EL10Ac3g06311 Beta vulgaris HOM05D002897 ORTHO05D007570 2.8e-31 139.0 133 53.4
Sp4g14970 Schrenkiella parvula HOM05D002897 ORTHO05D007570 2.8e-31 139.0 123 53.7
AT2G32180 Arabidopsis thaliana HOM05D002897 ORTHO05D007570 3.6e-31 138.7 126 54.0
MELO3C018840.2 Cucumis melo HOM05D002897 ORTHO05D007570 3.6e-31 138.7 111 57.7
Gohir.A07G186700 Gossypium hirsutum HOM05D002897 ORTHO05D007570 3.6e-31 138.7 106 60.4
AT2G32650 Arabidopsis thaliana HOM05D002897 ORTHO05D007570 4.7e-31 138.3 123 54.5
Haze_12785 Corylus avellana HOM05D002897 ORTHO05D007570 6.2e-31 137.9 107 59.8
Solyc07g049230.1 Solanum lycopersicum HOM05D002897 ORTHO05D007570 6.2e-31 137.9 116 56.9
Sopen07g025240 Solanum pennellii HOM05D002897 ORTHO05D007570 6.2e-31 137.9 116 56.9
BcaC02g11346 Brassica carinata HOM05D002897 ORTHO05D007570 8.1e-31 137.5 112 58.0
C04p17040 Brassica napus HOM05D002897 ORTHO05D007570 8.1e-31 137.5 112 58.0
BolC4t23256H Brassica oleracea HOM05D002897 ORTHO05D007570 8.1e-31 137.5 112 58.0
Oeu031218.1 Olea europaea HOM05D002897 ORTHO05D007570 8.1e-31 137.5 107 59.8
Sed0010664 Sechium edule HOM05D002897 ORTHO05D007570 8.1e-31 137.5 106 59.4
Dinv39736 Davidia involucrata HOM05D002897 ORTHO05D008718 1.1e-30 137.1 107 60.7
Peaxi162Scf00921g00013 Petunia axillaris HOM05D002897 ORTHO05D007570 1.1e-30 137.1 116 56.9
Atru.chr6.3237 Acer truncatum HOM05D002897 ORTHO05D007570 1.4e-30 136.7 107 59.8
BcaB02g10485 Brassica carinata HOM05D002897 ORTHO05D007570 1.4e-30 136.7 106 61.3
A05p12950 Brassica napus HOM05D002897 ORTHO05D007570 1.4e-30 136.7 111 57.7
BraA05t20235Z Brassica rapa HOM05D002897 ORTHO05D007570 1.4e-30 136.7 111 57.7
Cpa.g.sc132.6 Carica papaya HOM05D002897 ORTHO05D007570 1.4e-30 136.7 111 57.7
Lj1P779T15 Lonicera japonica HOM05D002897 ORTHO05D007570 1.4e-30 136.7 105 58.1
TWI75G1337 Tripterygium wilfordii HOM05D002897 ORTHO05D007570 1.4e-30 136.7 107 59.8
arahy.Tifrunner.gnm1.ann1.0I3WMA Arachis hypogaea HOM05D002897 ORTHO05D007570 1.8e-30 136.3 114 55.3
arahy.Tifrunner.gnm1.ann1.P1R172 Arachis hypogaea HOM05D002897 ORTHO05D007570 1.8e-30 136.3 114 55.3
BcaB06g28612 Brassica carinata HOM05D002897 ORTHO05D007570 1.8e-30 136.3 112 58.0
BraA04t18016Z Brassica rapa HOM05D002897 ORTHO05D007570 1.8e-30 136.3 112 58.0
QL08p031156 Quercus lobata HOM05D002897 ORTHO05D007570 1.8e-30 136.3 106 60.4
MSTRG.12280 Avicennia marina HOM05D002897 ORTHO05D007570 2.4e-30 136.0 117 55.6
C04p62130 Brassica napus HOM05D002897 ORTHO05D007570 2.4e-30 136.0 152 49.3
BolC4t27692H Brassica oleracea HOM05D002897 ORTHO05D007570 2.4e-30 136.0 112 58.0
CANSAT64G1239 Cannabis sativa HOM05D002897 ORTHO05D007570 2.4e-30 136.0 112 57.1
Nitab4.5_0000482g0100 Nicotiana tabacum HOM05D002897 ORTHO05D007570 2.4e-30 136.0 135 51.1
BcaB02g10455 Brassica carinata HOM05D002897 ORTHO05D007570 3.1e-30 135.6 142 53.5
Gohir.D07G193200 Gossypium hirsutum HOM05D002897 ORTHO05D007570 3.1e-30 135.6 106 59.4
Gorai.001G216300 Gossypium raimondii HOM05D002897 ORTHO05D007570 3.1e-30 135.6 106 59.4
MD17G1102300 Malus domestica HOM05D002897 ORTHO05D007570 3.1e-30 135.6 123 52.8
Thecc.01G180200 Theobroma cacao HOM05D002897 ORTHO05D007570 3.1e-30 135.6 107 58.9
Actinidia09728 Actinidia chinensis HOM05D002897 ORTHO05D007570 4.0e-30 135.2 117 54.7
ECA240G2609 Erigeron canadensis HOM05D002897 ORTHO05D007570 4.0e-30 135.2 132 50.8
Lsat_1_v5_gn_9_106701 Lactuca sativa HOM05D002897 ORTHO05D007570 4.0e-30 135.2 106 58.5
A05p13340 Brassica napus HOM05D002897 ORTHO05D007570 5.2e-30 134.8 144 49.3
BraA05t20273Z Brassica rapa HOM05D002897 ORTHO05D007570 5.2e-30 134.8 144 49.3
CiPaw.03G157100 Carya illinoinensis HOM05D002897 ORTHO05D007570 5.2e-30 134.8 107 59.8
DCAR_019749 Daucus carota HOM05D002897 ORTHO05D007570 5.2e-30 134.8 141 49.6
HanXRQChr03g0075631 Helianthus annuus HOM05D002897 ORTHO05D007570 6.8e-30 134.4 132 50.8
Hund20232 Selenicereus undatus HOM05D002897 ORTHO05D007570 6.8e-30 134.4 107 58.9
Nitab4.5_0003449g0090 Nicotiana tabacum HOM05D002897 ORTHO05D007570 8.9e-30 134.0 116 56.0
THA.LOC104826139 Tarenaya hassleriana HOM05D002897 ORTHO05D007570 8.9e-30 134.0 125 51.2
Actinidia13739 Actinidia chinensis HOM05D002897 ORTHO05D007570 1.2e-29 133.7 117 56.4
Aa31LG5G4700 Aethionema arabicum HOM05D002897 ORTHO05D007570 1.2e-29 133.7 105 61.0
Ah.13g074350 Amaranthus hybridus HOM05D002897 ORTHO05D007570 1.2e-29 133.7 115 54.8
Aqoxy7G01529 Aquilegia oxysepala HOM05D002897 ORTHO05D007570 1.2e-29 133.7 111 57.7
FAN14G2228 Fragaria x ananassa HOM05D002897 ORTHO05D007570 1.2e-29 133.7 116 54.3
Manes.13G067600 Manihot esculenta HOM05D002897 ORTHO05D007570 1.2e-29 133.7 105 58.1
Manes.13G067625 Manihot esculenta HOM05D002897 ORTHO05D007570 1.2e-29 133.7 105 58.1
BcaC02g07907 Brassica carinata HOM05D002897 ORTHO05D007570 1.5e-29 133.3 106 59.4
FAN02G3971 Fragaria x ananassa HOM05D002897 ORTHO05D007570 1.5e-29 133.3 116 54.3
PSO566G0275 Papaver somniferum HOM05D002897 ORTHO05D007570 1.5e-29 133.3 135 51.1
RcHm_v2.0_Chr2g0158451 Rosa chinensis HOM05D002897 ORTHO05D007570 1.5e-29 133.3 116 54.3
Duzib138G1435 Durio zibethinus HOM05D002897 ORTHO05D007570 2.0e-29 132.9 107 58.9
AUR62002619 Chenopodium quinoa HOM05D002897 ORTHO05D007570 2.6e-29 132.5 107 58.9
AUR62006482 Chenopodium quinoa HOM05D002897 ORTHO05D007570 2.6e-29 132.5 134 53.7
Ca_03579_v3 Cicer arietinum L. HOM05D002897 ORTHO05D007570 2.6e-29 132.5 106 56.6
CAN.G664.11 Capsicum annuum HOM05D002897 ORTHO05D007570 3.4e-29 132.1 105 60.0
COL.COLO4_21856 Corchorus olitorius HOM05D002897 ORTHO05D007570 3.4e-29 132.1 106 57.5
PGSC0003DMG400000672 Solanum tuberosum HOM05D002897 ORTHO05D007570 3.4e-29 132.1 104 58.7
LjContig00564g0007535 Lotus japonicus HOM05D002897 ORTHO05D007570 4.4e-29 131.7 106 55.7
LjContig00564g0010319 Lotus japonicus HOM05D002897 ORTHO05D007570 4.4e-29 131.7 106 55.7
PSO782G2696 Papaver somniferum HOM05D002897 ORTHO05D007570 4.4e-29 131.7 135 50.4
Sc21g0001180 Simmondsia chinensis HOM05D002897 ORTHO05D007570 4.4e-29 131.7 143 49.0
VMungo0647G0292 Vigna mungo HOM05D002897 ORTHO05D007570 5.8e-29 131.3 114 55.3
Potri.014G156900 Populus trichocarpa HOM05D002897 ORTHO05D007570 9.9e-29 130.6 115 53.9
SalBow1G1468 Salvia bowleyana HOM05D002897 ORTHO05D007570 1.3e-28 130.2 113 54.0
AUR62022566 Chenopodium quinoa HOM05D002897 ORTHO05D007570 1.7e-28 129.8 107 58.9
SalBow1G7922 Salvia bowleyana HOM05D002897 ORTHO05D007570 1.7e-28 129.8 113 54.0
TWI18G1070 Tripterygium wilfordii HOM05D002897 ORTHO05D007570 1.7e-28 129.8 107 56.1
AUR62030035 Chenopodium quinoa HOM05D002897 ORTHO05D007570 2.2e-28 129.4 134 53.7
FvH4_6g42600 Fragaria vesca HOM05D002897 ORTHO05D007570 2.9e-28 129.0 116 53.4
Glyma.02G270400 Glycine max HOM05D002897 ORTHO05D007570 2.9e-28 129.0 113 54.0
Migut.H01236 Erythranthe guttata HOM05D002897 ORTHO05D007570 3.8e-28 128.6 148 47.3
Glyma.14G046700 Glycine max HOM05D002897 ORTHO05D007570 3.8e-28 128.6 113 53.1
Mapoly0068s0043 Marchantia polymorpha HOM05D002897 ORTHO05D007570 4.9e-28 128.3 107 59.8
Phvul.008G211600 Phaseolus vulgaris HOM05D002897 ORTHO05D007570 8.4e-28 127.5 114 52.6
unitig_62.g23231 Utricularia gibba HOM05D002897 ORTHO05D007570 1.1e-27 127.1 144 47.2
Medtr1g086000 Medicago truncatula HOM05D002897 ORTHO05D007570 1.9e-27 126.3 106 54.7
Zm00001eb025350 Zea mays HOM05D002897 ORTHO05D007570 1.9e-27 126.3 140 48.6
Lalb_Chr10g0105691 Lupinus albus HOM05D002897 ORTHO05D007570 3.2e-27 125.6 114 51.8
Sabra14G0118700 Salix brachista HOM05D002897 ORTHO05D007570 4.1e-27 125.2 144 47.2
Os02g0784900 Oryza sativa ssp. japonica HOM05D002897 ORTHO05D007570 5.4e-27 124.8 109 56.9
Psat6g158840 Pisum sativum HOM05D002897 ORTHO05D007570 9.2e-27 124.0 105 55.2
Rhsim06G0166200 Rhododendron simsii HOM05D002897 ORTHO05D007570 9.2e-27 124.0 138 47.8
SMO137G0344 Selaginella moellendorffii HOM05D002897 ORTHO05D007570 1.6e-26 123.2 103 54.4
vmacro12175 Vaccinium macrocarpon HOM05D002897 ORTHO05D007570 1.6e-26 123.2 97 59.8
TPR.G31174 Trifolium pratense HOM05D002897 ORTHO05D007570 2.1e-26 122.9 103 54.4
BolC4t23293H Brassica oleracea HOM05D002897 ORTHO05D007570 3.2e-19 99.0 82 56.1
A04p25050 Brassica napus HOM05D002897 ORTHO05D007570 7.1e-19 97.8 107 48.6
CBR_g4877 Chara braunii HOM05D002897 ORTHO05D007570 6.0e-18 94.7 100 50.0
BcaC02g08731 Brassica carinata HOM05D002897 ORTHO05D007570 2.5e-16 89.4 135 42.2
FAN09G3117 Fragaria x ananassa HOM05D002897 ORTHO05D007570 1.5e-13 80.1 73 47.9
BcaB06g28611 Brassica carinata HOM05D002897 ORTHO05D007570 2.0e-13 79.7 66 53.0
BcaB06g28610 Brassica carinata HOM05D002897 ORTHO05D007570 2.6e-13 79.3 60 56.7
FAN05G4540 Fragaria x ananassa HOM05D002897 ORTHO05D007570 3.4e-13 79.0 100 43.0
AagrBONN_evm.TU.Sc2ySwM_368.1899 Anthoceros agrestis HOM05D002897 ORTHO05D007570 1.7e-12 76.6 105 41.0
Lalb_Chr04g0249921 Lupinus albus HOM05D002897 ORTHO05D007570 2.4e-11 72.8 106 37.7
SMO358G0019 Selaginella moellendorffii HOM05D001682 ORTHO05D001625 9.3e-11 70.9 95 38.9
C04p17460 Brassica napus HOM05D002897 ORTHO05D007570 6.0e-10 68.2 51 54.9
Zm00001eb423310 Zea mays HOM05D001682 ORTHO05D001625 1.8e-09 66.6 109 32.1
Os04g0445200 Oryza sativa ssp. japonica HOM05D001682 ORTHO05D001625 2.3e-09 66.2 93 33.3
CBR_g2916 Chara braunii HOM05D001682 ORTHO05D001625 6.7e-09 64.7 135 34.1
EL10Ac2g03831 Beta vulgaris HOM05D001682 ORTHO05D001625 8.7e-09 64.3 93 33.3
CDE07G0853 Ceratophyllum demersum HOM05D001682 ORTHO05D001625 1.5e-08 63.5 104 31.7
MELO3C022114.2 Cucumis melo HOM05D001682 ORTHO05D001625 1.9e-08 63.2 119 31.9
Sp6g07140 Schrenkiella parvula HOM05D001682 ORTHO05D001625 1.9e-08 63.2 105 29.5
Sc23g0005660 Simmondsia chinensis HOM05D001682 ORTHO05D001625 1.9e-08 63.2 93 32.3
SMO353G0261 Selaginella moellendorffii HOM05D001682 ORTHO05D001625 3.3e-08 62.4 104 30.8
AT4G10300 Arabidopsis thaliana HOM05D001682 ORTHO05D001625 5.6e-08 61.6 124 27.4
Zm00001eb081750 Zea mays HOM05D001682 ORTHO05D001625 7.4e-08 61.2 93 32.3
Actinidia03537 Actinidia chinensis HOM05D001682 ORTHO05D001625 9.6e-08 60.8 93 32.3
AL6G44130 Arabidopsis lyrata HOM05D001682 ORTHO05D001625 1.3e-07 60.5 103 29.1
HanXRQChr09g0266921 Helianthus annuus HOM05D001682 ORTHO05D001625 2.1e-07 59.7 112 28.6
Actinidia37562 Actinidia chinensis HOM05D001682 ORTHO05D001625 4.8e-07 58.5 90 35.6
Lalb_Chr06g0168821 Lupinus albus HOM05D001682 ORTHO05D001625 6.2e-07 58.2 93 32.3
SGA_v2.0_scaffold118G32655 Striga asiatica HOM05D001682 ORTHO05D001625 6.2e-07 58.2 106 28.3
Thecc.01G247200 Theobroma cacao HOM05D001682 ORTHO05D001625 6.2e-07 58.2 94 34.0
Thhalv10026608m.g Eutrema salsugineum HOM05D001682 ORTHO05D001625 8.1e-07 57.8 106 33.0
Gorai.001G236400 Gossypium raimondii HOM05D001682 ORTHO05D001625 8.1e-07 57.8 94 33.0
COL.COLO4_05329 Corchorus olitorius HOM05D001682 ORTHO05D001625 1.1e-06 57.4 94 33.0
Glyma.09G155000 Glycine max HOM05D001682 ORTHO05D001625 1.1e-06 57.4 93 33.3
Peaxi162Scf00156g00012 Petunia axillaris HOM05D001682 ORTHO05D001625 1.1e-06 57.4 89 32.6
Actinidia30114 Actinidia chinensis HOM05D001682 ORTHO05D001625 1.4e-06 57.0 90 34.4
AL7G23820 Arabidopsis lyrata HOM05D001682 ORTHO05D001625 1.4e-06 57.0 101 32.7
TWI12G0128 Tripterygium wilfordii HOM05D001682 ORTHO05D001625 1.4e-06 57.0 93 34.4
Ciclev10022982m.g Citrus clementina HOM05D001682 ORTHO05D001625 1.8e-06 56.6 89 36.0
Lj2g0020308 Lotus japonicus HOM05D001682 ORTHO05D001625 1.8e-06 56.6 90 32.2
Nitab4.5_0000087g0100 Nicotiana tabacum HOM05D001682 ORTHO05D001625 1.8e-06 56.6 85 31.8
MSTRG.10618 Avicennia marina HOM05D001682 ORTHO05D001625 2.4e-06 56.2 93 31.2
EL10Ac7g17724 Beta vulgaris HOM05D001682 ORTHO05D001625 2.4e-06 56.2 97 34.0
Dinv43048 Davidia involucrata HOM05D001682 ORTHO05D001625 2.4e-06 56.2 89 34.8
Gohir.A07G203200 Gossypium hirsutum HOM05D001682 ORTHO05D001625 2.4e-06 56.2 94 33.0
Sp7g26680 Schrenkiella parvula HOM05D001682 ORTHO05D001625 2.4e-06 56.2 103 33.0
Sed0002686 Sechium edule HOM05D001682 ORTHO05D001625 2.4e-06 56.2 94 28.7
AUR62006991 Chenopodium quinoa HOM05D001682 ORTHO05D001625 3.1e-06 55.8 89 36.0
CARHR236480 Cardamine hirsuta HOM05D001682 ORTHO05D001625 4.0e-06 55.5 115 30.4
Lsat_1_v5_gn_4_132341 Lactuca sativa HOM05D001682 ORTHO05D001625 4.0e-06 55.5 93 30.1
MBI07_g15419_MAGBIO Magnolia biondii HOM05D001682 ORTHO05D001625 4.0e-06 55.5 90 35.6
Manes.12G039200 Manihot esculenta HOM05D001682 ORTHO05D001625 4.0e-06 55.5 93 33.3
GSVIVG01028454001 Vitis vinifera HOM05D001682 ORTHO05D001625 4.0e-06 55.5 94 34.0
Manes.13G038400 Manihot esculenta HOM05D001682 ORTHO05D001625 5.3e-06 55.1 93 32.3
QL09p042517 Quercus lobata HOM05D001682 ORTHO05D001625 5.3e-06 55.1 89 34.8
Sc16g0009980 Simmondsia chinensis HOM05D001682 ORTHO05D001625 5.3e-06 55.1 89 36.0
ClCG06G001330 Citrullus lanatus HOM05D001682 ORTHO05D001625 6.9e-06 54.7 94 33.0
Cc10_g16250 Coffea canephora HOM05D001682 ORTHO05D001625 6.9e-06 54.7 96 30.2
MELO3C022400.2 Cucumis melo HOM05D001682 ORTHO05D001625 6.9e-06 54.7 99 32.3
CsaV3_6G007270 Cucumis sativus L. HOM05D001682 ORTHO05D001625 6.9e-06 54.7 99 32.3
Duzib138G0245 Durio zibethinus HOM05D001682 ORTHO05D001625 6.9e-06 54.7 95 31.6
arahy.Tifrunner.gnm1.ann1.Y9CT78 Arachis hypogaea HOM05D001682 ORTHO05D001625 9.0e-06 54.3 77 35.1
BraA01t00867Z Brassica rapa HOM05D001682 ORTHO05D001625 9.0e-06 54.3 103 32.0
Cpa.g.sc87.59 Carica papaya HOM05D001682 ORTHO05D001625 9.0e-06 54.3 93 35.5


User provided reference genes

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