Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_35306 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 2.2e-70 268.9 135 100.0
SEGI_38886 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 1.4e-61 239.6 118 100.0
Cc07_g05580 Coffea canephora HOM05D006685 ORTHO05D008244 2.7e-12 75.9 138 36.2
PSO541G3044 Papaver somniferum HOM05D006685 ORTHO05D008244 1.3e-11 73.6 133 36.8
Sed0001332 Sechium edule HOM05D006685 ORTHO05D008244 5.6e-10 68.2 120 37.5
MBI16_g19900_MAGBIO Magnolia biondii HOM05D006685 ORTHO05D008244 1.3e-09 67.0 135 31.9
Atru.chr3.446 Acer truncatum HOM05D006685 ORTHO05D008244 1.6e-09 66.6 121 36.4
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 4.8e-09 65.1 133 35.3
Hund16306 Selenicereus undatus HOM05D006685 ORTHO05D008244 6.2e-09 64.7 121 35.5
CANSAT01G2373 Cannabis sativa HOM05D006685 ORTHO05D008244 1.1e-08 63.9 120 36.7
Migut.H00483 Erythranthe guttata HOM05D006685 ORTHO05D008244 1.1e-08 63.9 133 33.8
FvH4_1g14850 Fragaria vesca HOM05D006685 ORTHO05D008244 1.8e-08 63.2 140 34.3
FAN28G0684 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.4e-08 62.8 140 34.3
FAN28G1646 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.4e-08 62.8 140 34.3
FAN23G0082 Fragaria x ananassa HOM05D006685 ORTHO05D008244 3.1e-08 62.4 120 34.2
Duzib187G0300 Durio zibethinus HOM05D006685 ORTHO05D008244 4.0e-08 62.0 133 30.1
Ciclev10025347m.g Citrus clementina HOM05D006685 ORTHO05D008244 5.3e-08 61.6 135 31.1
Nn5g29383 Nelumbo nucifera HOM05D006685 ORTHO05D008244 5.3e-08 61.6 114 32.5
Cfa004216 Carpinus fangiana HOM05D006685 ORTHO05D008244 6.9e-08 61.2 134 36.6
Prupe.7G141900 Prunus persica HOM05D006685 ORTHO05D008244 6.9e-08 61.2 134 33.6
Thecc.01G048300 Theobroma cacao HOM05D006685 ORTHO05D008244 6.9e-08 61.2 113 33.6
Psat4g089520 Pisum sativum HOM05D006685 ORTHO05D008244 9.0e-08 60.8 133 32.3
RcHm_v2.0_Chr1g0329901 Rosa chinensis HOM05D006685 ORTHO05D008244 9.0e-08 60.8 134 34.3
AL5G30586 Arabidopsis lyrata HOM05D006685 ORTHO05D008244 1.2e-07 60.5 135 32.6
RcHm_v2.0_Chr2g0103811 Rosa chinensis HOM05D006685 ORTHO05D008244 1.2e-07 60.5 134 34.3
QL06p043714 Quercus lobata HOM05D006685 ORTHO05D008244 1.5e-07 60.1 122 34.4
MD15G1276100 Malus domestica HOM05D006685 ORTHO05D008244 2.0e-07 59.7 134 34.3
Medtr8g079100 Medicago truncatula HOM05D006685 ORTHO05D008244 2.0e-07 59.7 132 33.3
TAR376G1120 Trochodendron aralioides HOM05D006685 ORTHO05D008244 2.6e-07 59.3 117 34.2
Actinidia36520 Actinidia chinensis HOM05D006685 ORTHO05D008244 3.4e-07 58.9 133 33.8
CAN.G836.36 Capsicum annuum HOM05D006685 ORTHO05D008244 3.4e-07 58.9 137 32.8
ClCG02G012840 Citrullus lanatus HOM05D006685 ORTHO05D008244 3.4e-07 58.9 126 33.3
Oeu003945.1 Olea europaea HOM05D006685 ORTHO05D008244 3.4e-07 58.9 133 31.6
AT3G50430 Arabidopsis thaliana HOM05D006685 ORTHO05D008244 5.8e-07 58.2 135 33.3
Carub.0005s1677 Capsella rubella HOM05D006685 ORTHO05D008244 7.6e-07 57.8 135 30.4
CARHR159940 Cardamine hirsuta HOM05D006685 ORTHO05D008244 7.6e-07 57.8 135 31.1
ATR0733G107 Amborella trichopoda HOM05D006685 ORTHO05D008244 1.0e-06 57.4 134 31.3
Solyc02g090260.3 Solanum lycopersicum HOM05D006685 ORTHO05D008244 1.3e-06 57.0 118 33.1
PGSC0003DMG402010073 Solanum tuberosum HOM05D006685 ORTHO05D008244 1.3e-06 57.0 138 31.2
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 1.7e-06 56.6 124 32.3
CSS0018173 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 1.7e-06 56.6 122 32.8
CiPaw.02G011900 Carya illinoinensis HOM05D006685 ORTHO05D008244 2.9e-06 55.8 58 50.0
Sopen02g034940 Solanum pennellii HOM05D006685 ORTHO05D008244 2.9e-06 55.8 118 33.1
TPR.G30340 Trifolium pratense HOM05D006685 ORTHO05D008244 2.9e-06 55.8 136 34.6
Thhalv10010194m.g Eutrema salsugineum HOM05D006685 ORTHO05D008244 3.8e-06 55.5 136 30.1
Nitab4.5_0001014g0040 Nicotiana tabacum HOM05D006685 ORTHO05D008244 3.8e-06 55.5 123 32.5
Peaxi162Scf00993g00018 Petunia axillaris HOM05D006685 ORTHO05D008244 4.9e-06 55.1 133 30.8
SGA_v2.0_scaffold204G41611 Striga asiatica HOM05D006685 ORTHO05D008244 4.9e-06 55.1 133 35.3
BcaB05g23218 Brassica carinata HOM05D006685 ORTHO05D008244 6.5e-06 54.7 137 29.9
Dinv26751 Davidia involucrata HOM05D006685 ORTHO05D008244 8.4e-06 54.3 138 29.0
Hma1.2p1_0546F.1_g176200 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 8.4e-06 54.3 134 30.6
Hma1.2p1_0546F.1_g176210 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 8.4e-06 54.3 134 30.6


User provided reference genes

Program Settings