Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_35056 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 4.1e-77 291.2 134 100.0
SEGI_08440 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 1.8e-72 275.8 133 94.7
SEGI_09919 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 1.8e-72 275.8 133 94.7
SEGI_21867 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 1.8e-72 275.8 133 94.7
SEGI_20804 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 6.1e-57 224.2 108 91.7
SEGI_20161 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 9.1e-53 210.3 126 78.6
arahy.Tifrunner.gnm1.ann1.XUIM66 Arachis hypogaea HOM05D007952 ORTHO05D009823 9.2e-29 130.6 118 56.8
arahy.Tifrunner.gnm1.ann1.TT5YJH Arachis hypogaea HOM05D007952 ORTHO05D009823 1.3e-27 126.7 159 47.2
PGSC0003DMG400028997 Solanum tuberosum HOM05D007952 ORTHO05D009823 5.1e-19 98.2 107 51.4
arahy.Tifrunner.gnm1.ann1.RE2PS1 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.2e-17 93.6 132 43.2
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.6e-17 92.0 131 46.6
Nn029s41587 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.2e-14 82.8 49 79.6
Nn064s42224 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.2e-14 82.8 49 79.6
Nn206s45068 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.2e-14 82.8 49 79.6
Nn219s45283 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.2e-14 82.8 49 79.6
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 2.9e-14 82.4 41 85.4
Atru.chr13.2454 Acer truncatum HOM05D007952 ORTHO05D009823 1.9e-13 79.7 38 86.8
arahy.Tifrunner.gnm1.ann1.0845WK Arachis hypogaea HOM05D007952 ORTHO05D009823 1.9e-13 79.7 38 86.8
arahy.Tifrunner.gnm1.ann1.88RRM9 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.9e-13 79.7 38 86.8
Nitab4.5_0001170g0050 Nicotiana tabacum HOM05D010190 ORTHO05D011667 3.2e-13 79.0 106 46.2
SEGI_38349 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 5.4e-13 78.2 34 97.1
arahy.Tifrunner.gnm1.ann1.HDQ4NC Arachis hypogaea HOM05D007952 ORTHO05D009823 1.6e-12 76.6 38 84.2
SEGI_02200 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 4.6e-12 75.1 39 82.1
Lsat_1_v5_gn_2_20561 Lactuca sativa HOM05D010488 ORTHO05D011667 3.0e-11 72.4 83 50.6
arahy.Tifrunner.gnm1.ann1.J5KLX8 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.1e-10 70.5 38 76.3
Lj2C1239G84 Lonicera japonica HOM05D007952 ORTHO05D009823 4.3e-10 68.6 34 85.3
CSS0039937 Camellia sinensis var. sinensis HOM05D007952 ORTHO05D009823 7.3e-10 67.8 56 58.9
EL10As10g23962 Beta vulgaris HOM05D007952 ORTHO05D009823 9.6e-10 67.4 33 84.8
Hma1.2p1_0594F.1_g185798 Hydrangea macrophylla HOM05D007952 ORTHO05D009823 9.6e-10 67.4 32 87.5
Medtr0002s0270 Medicago truncatula HOM05D007952 ORTHO05D009823 1.6e-09 66.6 32 87.5
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 2.1e-09 66.2 33 84.8
BcaC04g20704 Brassica carinata HOM05D007952 ORTHO05D009823 2.1e-09 66.2 33 84.8
MBI08_g48227_MAGBIO Magnolia biondii HOM05D007952 ORTHO05D009823 2.1e-09 66.2 33 84.8
Peaxi162Scf00987g00215 Petunia axillaris HOM05D007952 ORTHO05D009823 2.1e-09 66.2 33 84.8
unitig_87.g27919 Utricularia gibba HOM05D007952 ORTHO05D009823 2.1e-09 66.2 33 84.8
unitig_87.g28035 Utricularia gibba HOM05D007952 ORTHO05D009823 2.1e-09 66.2 33 84.8
unitig_91.g26519 Utricularia gibba HOM05D007952 ORTHO05D009823 2.1e-09 66.2 33 84.8
arahy.Tifrunner.gnm1.ann1.GIFH8E Arachis hypogaea HOM05D007952 ORTHO05D009823 2.8e-09 65.9 32 87.5
BolSC44t60812H Brassica oleracea HOM05D007952 ORTHO05D009823 2.8e-09 65.9 32 87.5
Migut.D01400 Erythranthe guttata HOM05D007952 ORTHO05D009823 2.8e-09 65.9 32 87.5
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 2.8e-09 65.9 32 87.5
Lsat_1_v5_gn_4_99801 Lactuca sativa HOM05D007952 ORTHO05D009823 2.8e-09 65.9 32 87.5
Medtr3g035635 Medicago truncatula HOM05D007952 ORTHO05D009823 2.8e-09 65.9 32 87.5
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 2.8e-09 65.9 32 87.5
Oeu020621.1 Olea europaea HOM05D007952 ORTHO05D009823 2.8e-09 65.9 32 87.5
PGSC0003DMG400035391 Solanum tuberosum HOM05D007952 ORTHO05D009823 2.8e-09 65.9 32 87.5
Nitab4.5_0007400g0010 Nicotiana tabacum HOM05D007952 ORTHO05D009823 8.1e-09 64.3 34 76.5
Atru.chr9.365 Acer truncatum HOM05D007952 ORTHO05D009823 1.1e-08 63.9 32 84.4
EL10Ac6g15366 Beta vulgaris HOM05D007952 ORTHO05D009823 1.1e-08 63.9 32 84.4
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 1.4e-08 63.5 32 84.4
Nn5g29057 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.4e-08 63.5 32 84.4
Oeu022560.1 Olea europaea HOM05D007952 ORTHO05D009823 1.8e-08 63.2 102 39.2
Sc04g0003580 Simmondsia chinensis HOM05D007952 ORTHO05D009823 6.8e-08 61.2 32 81.2
Sc23g0003910 Simmondsia chinensis HOM05D007952 ORTHO05D009823 6.8e-08 61.2 33 78.8
Sc01g0006530 Simmondsia chinensis HOM05D007952 ORTHO05D009823 1.5e-07 60.1 28 89.3
Ca_02733_v3 Cicer arietinum L. HOM05D008016 ORTHO05D009823 2.6e-07 59.3 31 80.6
ECA232G1868 Erigeron canadensis HOM05D000002 ORTHO05D002065 4.4e-07 58.5 28 85.7
arahy.Tifrunner.gnm1.ann1.B37VQ6 Arachis hypogaea HOM05D007952 ORTHO05D009823 5.8e-07 58.2 31 80.6
Psat0ss8367g0160 Pisum sativum HOM05D001387 ORTHO05D001250 5.8e-07 58.2 32 75.0
Sc21g0004590 Simmondsia chinensis HOM05D007952 ORTHO05D009823 7.6e-07 57.8 32 75.0
CBR_g12953 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-06 55.8 33 69.7
BolC6t36075H Brassica oleracea HOM05D000963 ORTHO05D009823 8.4e-06 54.3 31 74.2
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 8.4e-06 54.3 66 42.4


User provided reference genes

Program Settings