Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_35034 Sequoiadendron giganteum HOM05D005863 ORTHO05D003355 0.0e+00 2077.8 1113 100.0
COL.COLO4_23547 Corchorus olitorius HOM05D005863 ORTHO05D003355 3.7e-14 85.1 240 29.2
MSTRG.544 Avicennia marina HOM05D005863 ORTHO05D003355 1.4e-13 83.2 105 39.0
TAR629G1344 Trochodendron aralioides HOM05D005863 ORTHO05D003355 2.4e-13 82.4 95 44.2
vmacro09646 Vaccinium macrocarpon HOM05D005863 ORTHO05D003355 2.4e-13 82.4 83 44.6
Glyma.18G011700 Glycine max HOM05D013281 ORTHO05D003355 3.1e-13 82.0 112 37.5
Gorai.005G174200 Gossypium raimondii HOM05D005863 ORTHO05D003355 6.9e-13 80.9 102 39.2
PSO017G4976 Papaver somniferum HOM05D040514 ORTHO05D003355 9.1e-13 80.5 284 26.1
CiPaw.11G070600 Carya illinoinensis HOM05D005863 ORTHO05D003355 1.2e-12 80.1 123 35.8
Ciclev10030561m.g Citrus clementina HOM05D005863 ORTHO05D003355 1.2e-12 80.1 92 41.3
Rhsim12G0037600 Rhododendron simsii HOM05D005863 ORTHO05D003355 1.2e-12 80.1 71 50.7
Manes.12G018600 Manihot esculenta HOM05D005863 ORTHO05D003355 1.5e-12 79.7 95 38.9
Duzib268G1590 Durio zibethinus HOM05D005863 ORTHO05D003355 2.0e-12 79.3 244 26.2
MBI14_g22553_MAGBIO Magnolia biondii HOM05D005863 ORTHO05D003355 2.0e-12 79.3 78 42.3
vmacro01106 Vaccinium macrocarpon HOM05D005863 ORTHO05D003355 2.0e-12 79.3 71 50.7
Duzib251G0242 Durio zibethinus HOM05D005863 ORTHO05D003355 2.6e-12 79.0 85 43.5
GSVIVG01014696001 Vitis vinifera HOM05D005863 ORTHO05D003355 3.4e-12 78.6 97 39.2
CSS0034444 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D001683 5.9e-12 77.8 169 30.8
Lsat_1_v5_gn_8_150460 Lactuca sativa HOM05D005863 ORTHO05D003355 5.9e-12 77.8 146 32.9
Psat5g094240 Pisum sativum HOM05D013281 ORTHO05D003355 5.9e-12 77.8 98 36.7
ATR0751G078 Amborella trichopoda HOM05D005863 ORTHO05D003355 7.7e-12 77.4 158 33.5
Gohir.D13G135600 Gossypium hirsutum HOM05D005863 ORTHO05D003355 7.7e-12 77.4 87 42.5
HanXRQChr11g0334111 Helianthus annuus HOM05D005863 ORTHO05D003355 7.7e-12 77.4 84 41.7
TAR629G0397 Trochodendron aralioides HOM05D005863 ORTHO05D003355 7.7e-12 77.4 150 30.7
Manes.13G019100 Manihot esculenta HOM05D005863 ORTHO05D003355 1.3e-11 76.6 92 37.0
HanXRQChr08g0208041 Helianthus annuus HOM05D005863 ORTHO05D003355 2.2e-11 75.9 158 29.1
Rhsim04G0012300 Rhododendron simsii HOM05D005863 ORTHO05D003355 2.2e-11 75.9 83 42.2
Sed0006554 Sechium edule HOM05D005863 ORTHO05D003355 2.2e-11 75.9 236 27.1
Sc14g0008880 Simmondsia chinensis HOM05D005863 ORTHO05D003355 2.2e-11 75.9 101 41.6
Thecc.02G268600 Theobroma cacao HOM05D005863 ORTHO05D003355 2.2e-11 75.9 232 28.9
ClCG08G017500 Citrullus lanatus HOM05D005863 ORTHO05D003355 3.8e-11 75.1 159 33.3
PSO339G2613 Papaver somniferum HOM05D005863 ORTHO05D003355 3.8e-11 75.1 107 38.3
QL03p055923 Quercus lobata HOM05D005863 ORTHO05D003355 3.8e-11 75.1 249 28.9
ATR0824G200 Amborella trichopoda HOM05D005863 ORTHO05D003355 5.0e-11 74.7 114 36.0
Ciclev10008896m.g Citrus clementina HOM05D005863 ORTHO05D003355 5.0e-11 74.7 82 37.8
Lalb_Chr11g0075601 Lupinus albus HOM05D005863 ORTHO05D003355 5.0e-11 74.7 120 37.5
Potri.010G052200 Populus trichocarpa HOM05D005863 ORTHO05D003355 5.0e-11 74.7 82 41.5
AUR62024201 Chenopodium quinoa HOM05D025851 ORTHO05D044019 6.5e-11 74.3 88 39.8
Gorai.013G152000 Gossypium raimondii HOM05D005863 ORTHO05D003355 6.5e-11 74.3 87 41.4
Lsat_1_v5_gn_7_114301 Lactuca sativa HOM05D005863 ORTHO05D003355 6.5e-11 74.3 87 40.2
PGR031G1574 Punica granatum HOM05D005863 ORTHO05D003355 6.5e-11 74.3 82 43.9
Gohir.A03G131400 Gossypium hirsutum HOM05D005863 ORTHO05D003355 8.5e-11 73.9 242 27.3
Nitab4.5_0007393g0020 Nicotiana tabacum HOM05D012928 ORTHO05D003355 8.5e-11 73.9 85 43.5
PGSC0003DMG400010741 Solanum tuberosum HOM05D012928 ORTHO05D003355 1.1e-10 73.6 82 40.2
Migut.K00651 Erythranthe guttata HOM05D005863 ORTHO05D003355 1.4e-10 73.2 110 31.8
Nitab4.5_0000041g0190 Nicotiana tabacum HOM05D012928 ORTHO05D003355 1.4e-10 73.2 85 43.5
SalBow2G2700 Salvia bowleyana HOM05D005863 ORTHO05D003355 1.4e-10 73.2 87 39.1
Glyma.11G245500 Glycine max HOM05D013281 ORTHO05D003355 1.9e-10 72.8 101 37.6
Lj6A818T39 Lonicera japonica HOM05D005863 ORTHO05D003355 1.9e-10 72.8 101 39.6
PSO384G3490 Papaver somniferum HOM05D005863 ORTHO05D003355 1.9e-10 72.8 84 40.5
Peaxi162Scf01762g00013 Petunia axillaris HOM05D005863 ORTHO05D003355 1.9e-10 72.8 91 36.3
Prupe.8G267500 Prunus persica HOM05D014719 ORTHO05D003355 1.9e-10 72.8 91 38.5
Atru.chr2.3697 Acer truncatum HOM05D005863 ORTHO05D003355 2.5e-10 72.4 89 36.0
MELO3C010709.2 Cucumis melo HOM05D005863 ORTHO05D003355 2.5e-10 72.4 91 36.3
Sp7g04810 Schrenkiella parvula HOM05D008497 ORTHO05D003355 2.5e-10 72.4 78 43.6
Atru.chr11.2201 Acer truncatum HOM05D005863 ORTHO05D003355 3.2e-10 72.0 68 48.5
Medtr3g086220 Medicago truncatula HOM05D013281 ORTHO05D003355 3.2e-10 72.0 87 39.1
TWI36G0003 Tripterygium wilfordii HOM05D005863 ORTHO05D003355 4.2e-10 71.6 92 35.9
CsaV3_2G025110 Cucumis sativus L. HOM05D005863 ORTHO05D003355 5.5e-10 71.2 94 36.2
Gohir.A13G132200 Gossypium hirsutum HOM05D005863 ORTHO05D003355 5.5e-10 71.2 87 40.2
Solyc05g014130.3 Solanum lycopersicum HOM05D012928 ORTHO05D003355 5.5e-10 71.2 82 41.5
Sopen05g009140 Solanum pennellii HOM05D012928 ORTHO05D003355 5.5e-10 71.2 82 41.5
DCAR_024069 Daucus carota HOM05D005863 ORTHO05D003355 7.2e-10 70.9 91 38.5
PGR031G0790 Punica granatum HOM05D005863 ORTHO05D003355 7.2e-10 70.9 210 28.6
THA.LOC104807749 Tarenaya hassleriana HOM05D008497 ORTHO05D003355 7.2e-10 70.9 83 39.8
Potri.007G102500 Populus trichocarpa HOM05D005863 ORTHO05D003355 9.4e-10 70.5 105 33.3
Sabra07G0084200 Salix brachista HOM05D005863 ORTHO05D003355 9.4e-10 70.5 137 31.4
Dinv14763 Davidia involucrata HOM05D005863 ORTHO05D003355 1.2e-09 70.1 82 40.2
PGR102G1092 Punica granatum HOM05D005863 ORTHO05D003355 1.2e-09 70.1 82 42.7
RcHm_v2.0_Chr3g0496661 Rosa chinensis HOM05D014719 ORTHO05D003355 1.2e-09 70.1 89 39.3
PSO384G2180 Papaver somniferum HOM05D005863 ORTHO05D003355 2.1e-09 69.3 86 37.2
Sabra10G0018100 Salix brachista HOM05D005863 ORTHO05D003355 2.1e-09 69.3 258 27.5
Cpa.g.sc369.6 Carica papaya HOM05D005863 ORTHO05D003355 2.7e-09 68.9 136 33.8
SGA_v2.0_scaffold171G38860 Striga asiatica HOM05D005863 ORTHO05D003355 3.6e-09 68.6 78 41.0
TWI38G1195 Tripterygium wilfordii HOM05D005863 ORTHO05D003355 3.6e-09 68.6 83 38.6
Nitab4.5_0001159g0240 Nicotiana tabacum HOM05D005863 ORTHO05D003355 6.1e-09 67.8 82 37.8
QL08p003943 Quercus lobata HOM05D014719 ORTHO05D003355 7.9e-09 67.4 89 38.2
SalBow6G1550 Salvia bowleyana HOM05D005863 ORTHO05D003355 7.9e-09 67.4 104 36.5
Ah.02g130420 Amaranthus hybridus HOM05D025851 ORTHO05D003355 1.0e-08 67.0 81 34.6
arahy.Tifrunner.gnm1.ann1.11ED70 Arachis hypogaea HOM05D005863 ORTHO05D003355 1.8e-08 66.2 125 35.2
Migut.A01086 Erythranthe guttata HOM05D005863 ORTHO05D003355 1.8e-08 66.2 94 34.0
HPP92_003025 Vanilla planifolia HOM05D048574 ORTHO05D003355 1.8e-08 66.2 82 39.0
AT2G02770 Arabidopsis thaliana HOM05D008497 ORTHO05D003355 2.3e-08 65.9 105 37.1
arahy.Tifrunner.gnm1.ann1.9BU9L2 Arachis hypogaea HOM05D005863 ORTHO05D003355 2.3e-08 65.9 125 35.2
arahy.Tifrunner.gnm1.ann1.R3FSDD Arachis hypogaea HOM05D015529 ORTHO05D015409 2.3e-08 65.9 194 26.8
HPP92_027528 Vanilla planifolia HOM05D005863 ORTHO05D003355 2.3e-08 65.9 82 39.0
Peaxi162Scf00128g00645 Petunia axillaris HOM05D012928 ORTHO05D003355 3.0e-08 65.5 90 37.8
Ah.03g133620 Amaranthus hybridus HOM05D001489 ORTHO05D001380 3.9e-08 65.1 90 35.6
Lalb_Chr18g0052131 Lupinus albus HOM05D005863 ORTHO05D003355 6.7e-08 64.3 90 34.4
Nitab4.5_0006876g0020 Nicotiana tabacum HOM05D005863 ORTHO05D003355 6.7e-08 64.3 83 36.1
SalBow8G3261 Salvia bowleyana HOM05D005863 ORTHO05D003355 6.7e-08 64.3 108 34.3
Sc16g0008130 Simmondsia chinensis HOM05D005863 ORTHO05D003355 6.7e-08 64.3 97 35.1
THA.LOC104825539 Tarenaya hassleriana HOM05D005863 ORTHO05D003355 8.8e-08 63.9 90 36.7
Carub.0001s4470 Capsella rubella HOM05D008497 ORTHO05D003355 1.1e-07 63.5 73 43.8
Sp7g05260 Schrenkiella parvula HOM05D008497 ORTHO05D003355 1.5e-07 63.2 117 28.2
RcHm_v2.0_Chr4g0432241 Rosa chinensis HOM05D005863 ORTHO05D017031 2.0e-07 62.8 124 32.3
BraA01t02635Z Brassica rapa HOM05D008497 ORTHO05D003355 2.6e-07 62.4 147 31.3
CiPaw.12G138700 Carya illinoinensis HOM05D014719 ORTHO05D003355 2.6e-07 62.4 79 36.7
Lj6g0020676 Lotus japonicus HOM05D005863 ORTHO05D003355 3.3e-07 62.0 83 33.7
AL1G63810 Arabidopsis lyrata HOM05D008497 ORTHO05D003355 4.4e-07 61.6 163 30.1
AT4G00920 Arabidopsis thaliana HOM05D008497 ORTHO05D003355 4.4e-07 61.6 68 45.6
CANSAT78G1634 Cannabis sativa HOM05D005863 ORTHO05D003355 4.4e-07 61.6 152 28.3
Rhsim10G0199400 Rhododendron simsii HOM05D005863 ORTHO05D003355 7.4e-07 60.8 66 43.9
Aqoxy3G01339 Aquilegia oxysepala HOM05D005863 ORTHO05D003355 1.3e-06 60.1 70 37.1
FAN17G1935 Fragaria x ananassa HOM05D005863 ORTHO05D017031 1.3e-06 60.1 98 33.7
Rhsim10G0199200 Rhododendron simsii HOM05D005863 ORTHO05D003355 1.3e-06 60.1 58 44.8
FAN12G0897 Fragaria x ananassa HOM05D005863 ORTHO05D017031 1.7e-06 59.7 99 33.3
PSO339G3984 Papaver somniferum HOM05D005863 ORTHO05D003355 1.7e-06 59.7 93 33.3
Medtr2g036070 Medicago truncatula HOM05D005863 ORTHO05D003355 2.2e-06 59.3 83 34.9
Eucgr.F03684 Eucalyptus grandis HOM05D005863 ORTHO05D003355 2.8e-06 58.9 84 29.8
BcaC04g22481 Brassica carinata HOM05D008497 ORTHO05D003355 3.7e-06 58.5 175 24.6
AUR62005538 Chenopodium quinoa HOM05D025851 ORTHO05D044019 3.7e-06 58.5 195 29.2
FAN22G1084 Fragaria x ananassa HOM05D005863 ORTHO05D017031 3.7e-06 58.5 98 33.7
FAN22G1483 Fragaria x ananassa HOM05D005863 ORTHO05D017031 3.7e-06 58.5 98 33.7
BcaB02g10795 Brassica carinata HOM05D012516 ORTHO05D003355 4.8e-06 58.2 152 25.7
BcaB07g31396 Brassica carinata HOM05D008497 ORTHO05D003355 4.8e-06 58.2 146 28.8
BcaC02g10405 Brassica carinata HOM05D008497 ORTHO05D003355 6.3e-06 57.8 75 36.0
C04p29310 Brassica napus HOM05D008497 ORTHO05D003355 6.3e-06 57.8 75 36.0
SGA_v2.0_scaffold124G33641 Striga asiatica HOM05D005863 ORTHO05D003355 6.3e-06 57.8 87 32.2
Hund23103 Selenicereus undatus HOM05D005863 ORTHO05D003355 8.2e-06 57.4 65 35.4


User provided reference genes

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