Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34845 Sequoiadendron giganteum HOM05D007436 ORTHO05D009398 1.8e-43 178.7 84 100.0
MSTRG.14579 Avicennia marina HOM05D007436 ORTHO05D009398 5.4e-35 150.6 83 80.7
Nn3g16606 Nelumbo nucifera HOM05D007436 ORTHO05D009398 2.3e-33 145.2 83 77.1
Potri.006G000600 Populus trichocarpa HOM05D007436 ORTHO05D009398 2.3e-33 145.2 82 78.0
Potri.016G000900 Populus trichocarpa HOM05D007436 ORTHO05D009398 2.3e-33 145.2 82 79.3
Aqoxy5G00546 Aquilegia oxysepala HOM05D007436 ORTHO05D009398 3.9e-33 144.4 84 77.4
Nitab4.5_0000147g0110 Nicotiana tabacum HOM05D007436 ORTHO05D009398 3.9e-33 144.4 83 77.1
Nitab4.5_0001663g0200 Nicotiana tabacum HOM05D007436 ORTHO05D009398 3.9e-33 144.4 83 77.1
vmacro03584 Vaccinium macrocarpon HOM05D007436 ORTHO05D009398 5.0e-33 144.1 82 76.8
Dinv04377 Davidia involucrata HOM05D007436 ORTHO05D009398 6.6e-33 143.7 83 75.9
ECA247G4131 Erigeron canadensis HOM05D007436 ORTHO05D009398 6.6e-33 143.7 83 77.1
Glyma.09G017600 Glycine max HOM05D007436 ORTHO05D009398 8.6e-33 143.3 82 75.6
Peaxi162Scf00563g00525 Petunia axillaris HOM05D007436 ORTHO05D009398 8.6e-33 143.3 83 75.9
PGSC0003DMG400027262 Solanum tuberosum HOM05D007436 ORTHO05D009398 8.6e-33 143.3 83 77.1
CAN.G1905.6 Capsicum annuum HOM05D007436 ORTHO05D009398 1.1e-32 142.9 83 78.3
Glyma.15G123400 Glycine max HOM05D007436 ORTHO05D009398 1.1e-32 142.9 82 75.6
Lj6g0025098 Lotus japonicus HOM05D007436 ORTHO05D009398 1.1e-32 142.9 82 78.0
Rhsim13G0138000 Rhododendron simsii HOM05D007436 ORTHO05D009398 1.1e-32 142.9 82 75.6
Thecc.06G244700 Theobroma cacao HOM05D007436 ORTHO05D009398 1.1e-32 142.9 82 76.8
Actinidia01458 Actinidia chinensis HOM05D007436 ORTHO05D009398 1.5e-32 142.5 83 73.5
DCAR_015316 Daucus carota HOM05D007436 ORTHO05D009398 1.5e-32 142.5 83 75.9
VMungo0540G0488 Vigna mungo HOM05D007436 ORTHO05D009398 1.9e-32 142.1 82 74.4
Phvul.006G134500 Phaseolus vulgaris HOM05D007436 ORTHO05D009398 2.5e-32 141.7 82 74.4
TWI38G0239 Tripterygium wilfordii HOM05D007436 ORTHO05D009398 2.5e-32 141.7 82 76.8
PGR004G2900 Punica granatum HOM05D007436 ORTHO05D009398 4.3e-32 141.0 82 74.4
ATR0751G013 Amborella trichopoda HOM05D007436 ORTHO05D009398 5.6e-32 140.6 83 73.5
Migut.H01642 Erythranthe guttata HOM05D007436 ORTHO05D009398 5.6e-32 140.6 83 74.7
Sopen04g007390 Solanum pennellii HOM05D007436 ORTHO05D009398 5.6e-32 140.6 83 75.9
QL05p066185 Quercus lobata HOM05D007436 ORTHO05D009398 7.3e-32 140.2 82 74.4
EL10Ac6g14103 Beta vulgaris HOM05D007436 ORTHO05D009398 9.5e-32 139.8 83 72.3
Cc09_g00050 Coffea canephora HOM05D007436 ORTHO05D009398 9.5e-32 139.8 83 74.7
COL.COLO4_31969 Corchorus olitorius HOM05D007436 ORTHO05D009398 9.5e-32 139.8 82 74.4
ClCG01G021000 Citrullus lanatus HOM05D007436 ORTHO05D009398 1.2e-31 139.4 83 72.3
HanXRQChr05g0129051 Helianthus annuus HOM05D007436 ORTHO05D009398 1.2e-31 139.4 83 72.3
Lalb_Chr15g0088471 Lupinus albus HOM05D007436 ORTHO05D009398 1.2e-31 139.4 82 73.2
MBI14_g12730_MAGBIO Magnolia biondii HOM05D007436 ORTHO05D009398 1.2e-31 139.4 83 73.5
TAR627G0530 Trochodendron aralioides HOM05D007436 ORTHO05D009398 1.2e-31 139.4 83 72.3
HPP92_000124 Vanilla planifolia HOM05D007436 ORTHO05D009398 1.2e-31 139.4 83 72.3
Ah.02g128250 Amaranthus hybridus HOM05D007436 ORTHO05D009398 1.6e-31 139.0 83 72.3
Prupe.4G000400 Prunus persica HOM05D007436 ORTHO05D009398 1.6e-31 139.0 82 73.2
Solyc04g015330.3 Solanum lycopersicum HOM05D007436 ORTHO05D009398 1.6e-31 139.0 83 74.7
CDE03G0161 Ceratophyllum demersum HOM05D007436 ORTHO05D009398 2.1e-31 138.7 83 72.3
Ciclev10016151m.g Citrus clementina HOM05D007436 ORTHO05D009398 2.1e-31 138.7 82 73.2
MD10G1342400 Malus domestica HOM05D007436 ORTHO05D009398 2.1e-31 138.7 82 73.2
RcHm_v2.0_Chr5g0000011 Rosa chinensis HOM05D007436 ORTHO05D009398 2.1e-31 138.7 84 72.6
TPR.G10477 Trifolium pratense HOM05D007436 ORTHO05D009398 2.1e-31 138.7 82 73.2
AagrBONN_evm.TU.Sc2ySwM_228.5510 Anthoceros agrestis HOM05D007436 ORTHO05D009398 2.8e-31 138.3 83 72.3
Medtr2g028000 Medicago truncatula HOM05D007436 ORTHO05D009398 2.8e-31 138.3 82 72.0
Ca_24687_v3 Cicer arietinum L. HOM05D007436 ORTHO05D009398 3.6e-31 137.9 82 72.0
FvH4_3g00011 Fragaria vesca HOM05D007436 ORTHO05D009398 6.2e-31 137.1 84 71.4
FAN21G3717 Fragaria x ananassa HOM05D007436 ORTHO05D009398 6.2e-31 137.1 84 71.4
Gohir.D05G180600 Gossypium hirsutum HOM05D007436 ORTHO05D009398 6.2e-31 137.1 82 73.2
Gorai.009G185600 Gossypium raimondii HOM05D007436 ORTHO05D009398 6.2e-31 137.1 82 73.2
Hma1.2p1_0394F.1_g143390 Hydrangea macrophylla HOM05D007436 ORTHO05D009398 6.2e-31 137.1 83 72.3
Lsat_1_v5_gn_7_12720 Lactuca sativa HOM05D007436 ORTHO05D009398 6.2e-31 137.1 83 69.9
CsaV3_6G047980 Cucumis sativus L. HOM05D007436 ORTHO05D009398 8.0e-31 136.7 83 71.1
Mapoly0056s0036 Marchantia polymorpha HOM05D007436 ORTHO05D009398 1.1e-30 136.3 83 69.9
Psat1g171240 Pisum sativum HOM05D007436 ORTHO05D009398 1.1e-30 136.3 82 72.0
Sc24g0002050 Simmondsia chinensis HOM05D007436 ORTHO05D009398 1.8e-30 135.6 83 69.9
Os09g0287300 Oryza sativa ssp. japonica HOM05D007436 ORTHO05D009398 2.3e-30 135.2 82 74.4
CDE06G2435 Ceratophyllum demersum HOM05D007436 ORTHO05D009398 8.9e-30 133.3 83 68.7
AUR62028431 Chenopodium quinoa HOM05D007436 ORTHO05D009398 8.9e-30 133.3 83 68.7
Pp3c4_8570 Physcomitrium patens HOM05D007436 ORTHO05D009398 8.9e-30 133.3 83 72.3
Haze_07065 Corylus avellana HOM05D007436 ORTHO05D009398 1.2e-29 132.9 82 72.0
Sed0017957 Sechium edule HOM05D007436 ORTHO05D009398 2.0e-29 132.1 83 68.7
AUR62002774 Chenopodium quinoa HOM05D007436 ORTHO05D009398 9.8e-29 129.8 83 66.3
Zm00001eb309010 Zea mays HOM05D007436 ORTHO05D009398 6.4e-28 127.1 76 72.4
SMO358G0652 Selaginella moellendorffii HOM05D007436 ORTHO05D009398 1.1e-27 126.3 82 63.4
THA.LOC104813862 Tarenaya hassleriana HOM05D007436 ORTHO05D009398 1.4e-27 125.9 83 63.9
Aa31LG10G7250 Aethionema arabicum HOM05D007436 ORTHO05D009398 3.2e-27 124.8 83 65.1
Thhalv10010705m.g Eutrema salsugineum HOM05D007436 ORTHO05D009398 9.2e-27 123.2 83 67.5
Sp5g10120 Schrenkiella parvula HOM05D007436 ORTHO05D009398 1.2e-26 122.9 83 66.3
AL5G32730 Arabidopsis lyrata HOM05D007436 ORTHO05D009398 7.8e-26 120.2 83 65.1
AT3G52155 Arabidopsis thaliana HOM05D007436 ORTHO05D009398 1.0e-25 119.8 83 63.9
Carub.0005s1851 Capsella rubella HOM05D007436 ORTHO05D009398 1.0e-25 119.8 83 62.7
Oeu016929.1 Olea europaea HOM05D007436 ORTHO05D009398 1.3e-25 119.4 67 77.6
BcaC06g33383 Brassica carinata HOM05D007436 ORTHO05D009398 5.0e-25 117.5 83 63.9
C07p46820 Brassica napus HOM05D007436 ORTHO05D009398 5.0e-25 117.5 83 63.9
BolC7t45199H Brassica oleracea HOM05D007436 ORTHO05D009398 5.0e-25 117.5 83 63.9
BraA03t13973Z Brassica rapa HOM05D007436 ORTHO05D009398 5.0e-25 117.5 83 63.9
GSVIVG01002756001 Vitis vinifera HOM05D007436 ORTHO05D009398 5.0e-25 117.5 64 78.1
A03p48730 Brassica napus HOM05D007436 ORTHO05D009398 6.6e-25 117.1 83 63.9
Cpa.g.sc27.183 Carica papaya HOM05D007436 ORTHO05D009398 8.6e-25 116.7 64 79.7
Sabra06G0000900 Salix brachista HOM05D002163 ORTHO05D002386 2.5e-24 115.2 64 78.1
CARHR161900 Cardamine hirsuta HOM05D007436 ORTHO05D009398 3.3e-24 114.8 82 62.2
arahy.Tifrunner.gnm1.ann1.61UQ0U Arachis hypogaea HOM05D007436 ORTHO05D009398 4.3e-24 114.4 64 75.0
Hund25779 Selenicereus undatus HOM05D007436 ORTHO05D009398 2.1e-23 112.1 70 70.0
CiPaw.09G113200 Carya illinoinensis HOM05D007436 ORTHO05D009398 2.8e-23 111.7 64 76.6
Atru.chr1.2207 Acer truncatum HOM05D002163 ORTHO05D002386 4.7e-23 110.9 64 75.0
CBR_g31519 Chara braunii HOM05D007436 ORTHO05D009398 5.2e-22 107.5 84 60.7
Zm00001eb097480 Zea mays HOM05D007436 ORTHO05D009398 6.8e-22 107.1 64 71.9
SGA_v2.0_scaffold49G18215 Striga asiatica HOM05D007436 ORTHO05D009398 8.9e-22 106.7 64 73.4
Eucgr.D00973 Eucalyptus grandis HOM05D007436 ORTHO05D009398 8.3e-20 100.1 63 66.7
MCO14G290 Micromonas commoda HOM05D007436 ORTHO05D009398 1.9e-11 72.4 90 43.3
Lj1A1250G59 Lonicera japonica HOM05D007436 ORTHO05D009398 3.2e-11 71.6 39 76.9
Cre10.g431850 Chlamydomonas reinhardtii HOM05D007436 ORTHO05D009398 2.3e-09 65.5 67 44.8
Sabra16G0007700 Salix brachista HOM05D002163 ORTHO05D002386 1.8e-06 55.8 102 37.3
PRCOL_00004330 Prasinoderma coloniale HOM05D007436 ORTHO05D009398 2.4e-06 55.5 81 34.6


User provided reference genes

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