Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34839 Sequoiadendron giganteum HOM05D004748 ORTHO05D005825 5.0e-73 277.7 143 100.0
TAR625G1093 Trochodendron aralioides HOM05D004748 ORTHO05D005825 3.6e-31 138.7 84 78.6
GSVIVG01029626001 Vitis vinifera HOM05D004748 ORTHO05D005825 1.8e-30 136.3 84 77.4
ATR0580G210 Amborella trichopoda HOM05D004748 ORTHO05D005825 5.2e-30 134.8 84 76.2
CsaV3_7G033760 Cucumis sativus L. HOM05D004748 ORTHO05D005825 8.9e-30 134.0 84 76.2
MBI14_g10723_MAGBIO Magnolia biondii HOM05D004748 ORTHO05D005825 8.9e-30 134.0 84 77.4
Nn8g40686 Nelumbo nucifera HOM05D004748 ORTHO05D005825 8.9e-30 134.0 84 75.0
MELO3C024289.2 Cucumis melo HOM05D004748 ORTHO05D005825 1.5e-29 133.3 84 76.2
Oeu001810.2 Olea europaea HOM05D004748 ORTHO05D005825 2.6e-29 132.5 83 75.9
Sed0019048 Sechium edule HOM05D004748 ORTHO05D005825 2.6e-29 132.5 84 75.0
Manes.03G081362 Manihot esculenta HOM05D004748 ORTHO05D005825 3.4e-29 132.1 84 75.0
Lj5A24T50 Lonicera japonica HOM05D004748 ORTHO05D005825 4.4e-29 131.7 84 77.4
Potri.010G251300 Populus trichocarpa HOM05D004748 ORTHO05D005825 5.8e-29 131.3 84 73.8
Peaxi162Scf00207g01631 Petunia axillaris HOM05D004748 ORTHO05D005825 7.5e-29 131.0 84 73.8
CSS0006652 Camellia sinensis var. sinensis HOM05D004748 ORTHO05D005825 9.8e-29 130.6 84 73.8
CiPaw.01G089000 Carya illinoinensis HOM05D004748 ORTHO05D005825 2.2e-28 129.4 84 73.8
Pp3c20_1650 Physcomitrium patens HOM05D004748 ORTHO05D005825 2.2e-28 129.4 83 69.9
AagrBONN_evm.TU.Sc2ySwM_344.1578 Anthoceros agrestis HOM05D004748 ORTHO05D005825 2.9e-28 129.0 83 71.1
Cpa.g.sc67.3 Carica papaya HOM05D004748 ORTHO05D005825 3.7e-28 128.6 78 78.2
Cfa002138 Carpinus fangiana HOM05D004748 ORTHO05D005825 3.7e-28 128.6 84 73.8
QL05p082110 Quercus lobata HOM05D004748 ORTHO05D005825 3.7e-28 128.6 83 74.7
THA.LOC104816897 Tarenaya hassleriana HOM05D004748 ORTHO05D005825 3.7e-28 128.6 82 75.6
COL.COLO4_31191 Corchorus olitorius HOM05D004748 ORTHO05D005825 4.9e-28 128.3 78 78.2
Sabra10G0195200 Salix brachista HOM05D004748 ORTHO05D005825 4.9e-28 128.3 84 73.8
Thecc.06G061000 Theobroma cacao HOM05D004748 ORTHO05D005825 4.9e-28 128.3 78 78.2
Actinidia00640 Actinidia chinensis HOM05D004748 ORTHO05D005825 6.4e-28 127.9 84 73.8
CAN.G308.5 Capsicum annuum HOM05D004748 ORTHO05D005825 6.4e-28 127.9 84 72.6
CDE04G0266 Ceratophyllum demersum HOM05D004748 ORTHO05D005825 6.4e-28 127.9 84 70.2
Lj9C541G21 Lonicera japonica HOM05D004748 ORTHO05D001811 6.4e-28 127.9 78 78.2
AT1G51610 Arabidopsis thaliana HOM05D004748 ORTHO05D005825 8.3e-28 127.5 83 73.5
Carub.0001s4046 Capsella rubella HOM05D004748 ORTHO05D005825 8.3e-28 127.5 82 75.6
Duzib192G0179 Durio zibethinus HOM05D004748 ORTHO05D005825 8.3e-28 127.5 78 78.2
Migut.I01182 Erythranthe guttata HOM05D004748 ORTHO05D005825 8.3e-28 127.5 83 73.5
Nitab4.5_0002661g0120 Nicotiana tabacum HOM05D004748 ORTHO05D005825 8.3e-28 127.5 84 72.6
Gohir.D06G120700 Gossypium hirsutum HOM05D004748 ORTHO05D005825 1.1e-27 127.1 78 76.9
Gorai.010G141000 Gossypium raimondii HOM05D004748 ORTHO05D005825 1.1e-27 127.1 78 76.9
Rhsim12G0214600 Rhododendron simsii HOM05D004748 ORTHO05D005825 1.1e-27 127.1 84 72.6
CARHR041760 Cardamine hirsuta HOM05D004748 ORTHO05D005825 1.4e-27 126.7 82 73.2
Prupe.3G019200 Prunus persica HOM05D004748 ORTHO05D005825 1.4e-27 126.7 84 72.6
MD17G1146400 Malus domestica HOM05D004748 ORTHO05D005825 1.8e-27 126.3 84 72.6
Medtr4g008150 Medicago truncatula HOM05D004748 ORTHO05D005825 1.8e-27 126.3 78 75.6
arahy.Tifrunner.gnm1.ann1.2A2X48 Arachis hypogaea HOM05D004748 ORTHO05D005825 2.4e-27 125.9 78 75.6
arahy.Tifrunner.gnm1.ann1.660VQ8 Arachis hypogaea HOM05D004748 ORTHO05D005825 2.4e-27 125.9 78 75.6
BcaB07g33612 Brassica carinata HOM05D004748 ORTHO05D005825 2.4e-27 125.9 78 74.4
BcaC08g43322 Brassica carinata HOM05D004748 ORTHO05D005825 2.4e-27 125.9 78 74.4
A06p02380 Brassica napus HOM05D004748 ORTHO05D005825 2.4e-27 125.9 78 74.4
C06p06730 Brassica napus HOM05D004748 ORTHO05D005825 2.4e-27 125.9 78 74.4
BolC6t35782H Brassica oleracea HOM05D004748 ORTHO05D005825 2.4e-27 125.9 78 74.4
BraA06t23445Z Brassica rapa HOM05D004748 ORTHO05D005825 2.4e-27 125.9 78 74.4
Eucgr.F04020 Eucalyptus grandis HOM05D004748 ORTHO05D005825 2.4e-27 125.9 78 75.6
Gohir.A06G115900 Gossypium hirsutum HOM05D004748 ORTHO05D005825 2.4e-27 125.9 78 75.6
Mapoly0185s0006 Marchantia polymorpha HOM05D004748 ORTHO05D005825 2.4e-27 125.9 83 71.1
TWI12G1435 Tripterygium wilfordii HOM05D004748 ORTHO05D005825 2.4e-27 125.9 84 70.2
Actinidia31132 Actinidia chinensis HOM05D004748 ORTHO05D005825 3.2e-27 125.6 84 72.6
Duzib235G0633 Durio zibethinus HOM05D004748 ORTHO05D005825 3.2e-27 125.6 78 76.9
Nitab4.5_0003757g0030 Nicotiana tabacum HOM05D004748 ORTHO05D005825 3.2e-27 125.6 84 71.4
Cc04_g00320 Coffea canephora HOM05D004748 ORTHO05D005825 4.1e-27 125.2 82 73.2
AL1G59520 Arabidopsis lyrata HOM05D004748 ORTHO05D005825 5.4e-27 124.8 82 73.2
Sp1g38250 Schrenkiella parvula HOM05D004748 ORTHO05D005825 5.4e-27 124.8 78 75.6
FvH4_6g37160 Fragaria vesca HOM05D004748 ORTHO05D005825 7.0e-27 124.4 78 74.4
FAN05G0392 Fragaria x ananassa HOM05D004748 ORTHO05D005825 7.0e-27 124.4 78 74.4
FAN05G2438 Fragaria x ananassa HOM05D004748 ORTHO05D005825 7.0e-27 124.4 78 74.4
FAN09G1322 Fragaria x ananassa HOM05D004748 ORTHO05D005825 7.0e-27 124.4 78 74.4
FAN14G2305 Fragaria x ananassa HOM05D004748 ORTHO05D005825 7.0e-27 124.4 78 74.4
Glyma.08G222000 Glycine max HOM05D004748 ORTHO05D005825 7.0e-27 124.4 78 74.4
RcHm_v2.0_Chr2g0149771 Rosa chinensis HOM05D004748 ORTHO05D005825 7.0e-27 124.4 78 74.4
MD09G1160600 Malus domestica HOM05D004748 ORTHO05D005825 9.2e-27 124.0 84 72.6
Phvul.008G254900 Phaseolus vulgaris HOM05D004748 ORTHO05D005825 1.6e-26 123.2 78 74.4
SHI31092 Sapria himalayana HOM05D004748 ORTHO05D005825 1.6e-26 123.2 84 70.2
SMO228G0169 Selaginella moellendorffii HOM05D004748 ORTHO05D005825 1.6e-26 123.2 84 70.2
Sopen06g022700 Solanum pennellii HOM05D004748 ORTHO05D005825 1.6e-26 123.2 84 71.4
PGSC0003DMG400026506 Solanum tuberosum HOM05D004748 ORTHO05D005825 1.6e-26 123.2 84 71.4
SGA_v2.0_scaffold71G24004 Striga asiatica HOM05D004748 ORTHO05D005825 1.6e-26 123.2 82 73.2
Hund18602 Selenicereus undatus HOM05D004748 ORTHO05D005825 2.0e-26 122.9 83 68.7
Aqoxy7G02343 Aquilegia oxysepala HOM05D004748 ORTHO05D005825 2.7e-26 122.5 78 73.1
CDE07G1729 Ceratophyllum demersum HOM05D004748 ORTHO05D005825 2.7e-26 122.5 84 67.9
Ca_20497_v3 Cicer arietinum L. HOM05D004748 ORTHO05D005825 2.7e-26 122.5 78 74.4
Lj3g0017034 Lotus japonicus HOM05D004748 ORTHO05D005825 2.7e-26 122.5 78 74.4
PGR102G1746 Punica granatum HOM05D004748 ORTHO05D005825 2.7e-26 122.5 78 73.1
VMungo0647G1450 Vigna mungo HOM05D004748 ORTHO05D005825 2.7e-26 122.5 78 74.4
Solyc06g063250.3 Solanum lycopersicum HOM05D004748 ORTHO05D005825 3.5e-26 122.1 84 70.2
TPR.G15725 Trifolium pratense HOM05D004748 ORTHO05D005825 3.5e-26 122.1 78 74.4
Hma1.2p1_0517F.1_g170670 Hydrangea macrophylla HOM05D004748 ORTHO05D005825 6.0e-26 121.3 81 74.1
Aa31LG10G3160 Aethionema arabicum HOM05D004748 ORTHO05D005825 7.8e-26 120.9 79 74.7
MSTRG.10889 Avicennia marina HOM05D004748 ORTHO05D005825 1.3e-25 120.2 84 71.4
Ah.15g094390 Amaranthus hybridus HOM05D004748 ORTHO05D005825 1.7e-25 119.8 82 64.6
DCAR_022622 Daucus carota HOM05D004748 ORTHO05D005825 2.3e-25 119.4 83 68.7
Lalb_Chr04g0264641 Lupinus albus HOM05D004748 ORTHO05D005825 2.3e-25 119.4 78 73.1
AUR62001358 Chenopodium quinoa HOM05D004748 ORTHO05D005825 3.0e-25 119.0 78 69.2
PSO017G2012 Papaver somniferum HOM05D004748 ORTHO05D005825 3.0e-25 119.0 78 70.5
PSO170G5564 Papaver somniferum HOM05D004748 ORTHO05D005825 3.0e-25 119.0 78 70.5
CANSAT01G3164 Cannabis sativa HOM05D004748 ORTHO05D005825 5.0e-25 118.2 78 71.8
Zm00001eb086340 Zea mays HOM05D004748 ORTHO05D005825 5.0e-25 118.2 80 67.5
HanXRQChr10g0311461 Helianthus annuus HOM05D004748 ORTHO05D005825 6.6e-25 117.9 84 69.0
HPP92_026143 Vanilla planifolia HOM05D004748 ORTHO05D005825 6.6e-25 117.9 78 69.2
BcaB02g11258 Brassica carinata HOM05D004748 ORTHO05D005825 8.6e-25 117.5 78 71.8
AUR62025643 Chenopodium quinoa HOM05D004748 ORTHO05D005825 8.6e-25 117.5 78 67.9
Os04g0298200 Oryza sativa ssp. japonica HOM05D004748 ORTHO05D005825 1.5e-24 116.7 82 67.1
EL10Ac7g18182 Beta vulgaris HOM05D004748 ORTHO05D005825 4.3e-24 115.2 78 65.4
Haze_16297 Corylus avellana HOM05D004748 ORTHO05D005825 4.3e-24 115.2 108 57.4
FAN05G1723 Fragaria x ananassa HOM05D000043 ORTHO05D001551 4.3e-24 115.2 78 70.5
BcaC08g43922 Brassica carinata HOM05D004748 ORTHO05D005825 1.6e-23 113.2 78 69.2
A05p19500 Brassica napus HOM05D004748 ORTHO05D005825 1.6e-23 113.2 78 69.2
C06p13150 Brassica napus HOM05D004748 ORTHO05D005825 1.6e-23 113.2 78 69.2
BolC6t36471H Brassica oleracea HOM05D004748 ORTHO05D005825 1.6e-23 113.2 78 69.2
Peaxi162Scf00038g02524 Petunia axillaris HOM05D004748 ORTHO05D005825 2.8e-23 112.5 84 63.1
BraA05t20854Z Brassica rapa HOM05D004748 ORTHO05D005825 3.6e-23 112.1 78 67.9
Nitab4.5_0012506g0020 Nicotiana tabacum HOM05D004748 ORTHO05D005825 4.7e-23 111.7 81 64.2
CARHR041770 Cardamine hirsuta HOM05D004748 ORTHO05D005825 6.2e-23 111.3 79 69.6
Hund05683 Selenicereus undatus HOM05D004748 ORTHO05D005825 1.1e-22 110.5 80 61.2
BcaC03g16763 Brassica carinata HOM05D004748 ORTHO05D005825 2.3e-22 109.4 75 68.0
C02p46400 Brassica napus HOM05D004748 ORTHO05D005825 2.3e-22 109.4 75 68.0
BolC2t10691H Brassica oleracea HOM05D004748 ORTHO05D005825 2.3e-22 109.4 75 68.0
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 3.1e-22 109.0 76 67.1
A04p28800 Brassica napus HOM05D004748 ORTHO05D005825 2.6e-21 105.9 75 65.3
BraA08t33859Z Brassica rapa HOM05D004748 ORTHO05D005825 2.6e-21 105.9 75 65.3
Atru.chr1.2705 Acer truncatum HOM05D004748 ORTHO05D005825 7.5e-21 104.4 78 61.5
BraA04t18357Z Brassica rapa HOM05D004748 ORTHO05D005825 9.8e-21 104.0 75 64.0
ECA234G0898 Erigeron canadensis HOM05D004748 ORTHO05D005825 7.0e-19 97.8 70 67.1
Lsat_1_v5_gn_5_137380 Lactuca sativa HOM05D004748 ORTHO05D005825 7.0e-19 97.8 74 64.9
Nitab4.5_0001691g0140 Nicotiana tabacum HOM05D004748 ORTHO05D005825 5.0e-17 91.7 67 64.2
ClCG09G001570 Citrullus lanatus HOM05D004748 ORTHO05D005825 5.4e-11 71.6 40 85.0
A10p03860 Brassica napus HOM05D004748 ORTHO05D005825 4.6e-10 68.6 79 46.8
BcaB04g17188 Brassica carinata HOM05D001232 ORTHO05D001073 7.8e-10 67.8 36 88.9
Ciclev10025586m.g Citrus clementina HOM05D004748 ORTHO05D005825 2.3e-09 66.2 47 63.8
Cre06.g289150 Chlamydomonas reinhardtii HOM05D004748 ORTHO05D005825 3.0e-09 65.9 77 40.3
FAN02G4052 Fragaria x ananassa HOM05D004748 ORTHO05D005825 6.6e-09 64.7 43 65.1
MCO14G368 Micromonas commoda HOM05D004748 ORTHO05D005825 7.3e-08 61.2 85 43.5
FAN03G2435 Fragaria x ananassa HOM05D000153 ORTHO05D000118 1.2e-07 60.5 50 62.0


User provided reference genes

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