Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34767 Sequoiadendron giganteum HOM05D000170 ORTHO05D384413 5.9e-55 217.2 105 100.0
SEGI_21329 Sequoiadendron giganteum HOM05D000170 ORTHO05D000154 1.8e-08 62.8 62 50.0
SEGI_35520 Sequoiadendron giganteum HOM05D000170 ORTHO05D000154 2.4e-08 62.4 73 43.8
SEGI_39696 Sequoiadendron giganteum HOM05D000170 ORTHO05D000154 3.1e-08 62.0 62 48.4
Prupe.3G235500 Prunus persica HOM05D000170 ORTHO05D000154 7.0e-08 60.8 73 42.5
SEGI_18271 Sequoiadendron giganteum HOM05D000170 ORTHO05D000154 7.0e-08 60.8 62 46.8
ClCG02G017470 Citrullus lanatus HOM05D000170 ORTHO05D000154 9.2e-08 60.5 74 45.9
Ciclev10006704m.g Citrus clementina HOM05D000170 ORTHO05D000154 9.2e-08 60.5 72 44.4
SEGI_13718 Sequoiadendron giganteum HOM05D000170 ORTHO05D000154 9.2e-08 60.5 86 37.2
ClCG02G017480 Citrullus lanatus HOM05D000170 ORTHO05D000154 1.2e-07 60.1 74 45.9
FAN02G2803 Fragaria x ananassa HOM05D000170 ORTHO05D000154 1.2e-07 60.1 81 42.0
CSS0006936 Camellia sinensis var. sinensis HOM05D000170 ORTHO05D000154 1.6e-07 59.7 72 47.2
Eucgr.K00955 Eucalyptus grandis HOM05D000170 ORTHO05D000154 2.0e-07 59.3 80 40.0
SEGI_18108 Sequoiadendron giganteum HOM05D000170 ORTHO05D000159 2.0e-07 59.3 69 43.5
SEGI_40786 Sequoiadendron giganteum HOM05D000170 ORTHO05D000154 2.7e-07 58.9 72 38.9
AagrBONN_evm.TU.Sc2ySwM_368.3174 Anthoceros agrestis HOM05D000170 ORTHO05D000159 3.5e-07 58.5 58 48.3
ClCG00G006080 Citrullus lanatus HOM05D000170 ORTHO05D000154 3.5e-07 58.5 72 45.8
FvH4_6g45070 Fragaria vesca HOM05D000170 ORTHO05D000154 3.5e-07 58.5 72 45.8
FAN09G4407 Fragaria x ananassa HOM05D000170 ORTHO05D000154 3.5e-07 58.5 72 45.8
FAN14G4106 Fragaria x ananassa HOM05D000170 ORTHO05D000154 3.5e-07 58.5 72 45.8
PSO717G0060 Papaver somniferum HOM05D000170 ORTHO05D000154 3.5e-07 58.5 82 41.5
Dinv23682 Davidia involucrata HOM05D000170 ORTHO05D000154 4.5e-07 58.2 75 41.3
Hma1.2p1_0213F.1_g090380 Hydrangea macrophylla HOM05D000170 ORTHO05D000154 4.5e-07 58.2 86 39.5
RcHm_v2.0_Chr4g0427651 Rosa chinensis HOM05D000170 ORTHO05D000154 4.5e-07 58.2 72 45.8
SEGI_36727 Sequoiadendron giganteum HOM05D000170 ORTHO05D000154 4.5e-07 58.2 62 46.8
CSS0007434 Camellia sinensis var. sinensis HOM05D000170 ORTHO05D000154 5.9e-07 57.8 72 44.4
CSS0033028 Camellia sinensis var. sinensis HOM05D000170 ORTHO05D000154 5.9e-07 57.8 72 44.4
COL.COLO4_35394 Corchorus olitorius HOM05D000170 ORTHO05D000154 5.9e-07 57.8 87 42.5
FAN13G3120 Fragaria x ananassa HOM05D000170 ORTHO05D000154 5.9e-07 57.8 72 45.8
Prupe.3G235300 Prunus persica HOM05D000170 ORTHO05D000154 5.9e-07 57.8 67 41.8
SEGI_07883 Sequoiadendron giganteum HOM05D000170 ORTHO05D000154 5.9e-07 57.8 62 45.2
CSS0025746 Camellia sinensis var. sinensis HOM05D000170 ORTHO05D000154 7.7e-07 57.4 72 44.4
TWI36G0446 Tripterygium wilfordii HOM05D000170 ORTHO05D000154 7.7e-07 57.4 72 38.9
RcHm_v2.0_Chr2g0139131 Rosa chinensis HOM05D000170 ORTHO05D000154 1.0e-06 57.0 72 44.4
SEGI_35795 Sequoiadendron giganteum HOM05D000170 ORTHO05D000154 1.0e-06 57.0 62 45.2
CSS0037428 Camellia sinensis var. sinensis HOM05D000170 ORTHO05D000154 1.3e-06 56.6 72 44.4
Eucgr.K01696 Eucalyptus grandis HOM05D000170 ORTHO05D000154 1.3e-06 56.6 80 38.8
PSO339G5216 Papaver somniferum HOM05D000170 ORTHO05D000154 1.3e-06 56.6 76 38.2
QL08p037935 Quercus lobata HOM05D000170 ORTHO05D000154 1.3e-06 56.6 73 42.5
TWI75G1608 Tripterygium wilfordii HOM05D000170 ORTHO05D000154 1.3e-06 56.6 81 35.8
PSO717G0068 Papaver somniferum HOM05D000170 ORTHO05D000154 1.7e-06 56.2 77 41.6
PSO801G0597 Papaver somniferum HOM05D000170 ORTHO05D000154 1.7e-06 56.2 71 42.3
TAR624G0172 Trochodendron aralioides HOM05D000170 ORTHO05D000154 1.7e-06 56.2 83 41.0
MELO3C013600.2 Cucumis melo HOM05D000170 ORTHO05D000154 2.3e-06 55.8 74 43.2
CsaV3_6G013080 Cucumis sativus L. HOM05D000170 ORTHO05D000154 2.3e-06 55.8 74 43.2
QL08p037995 Quercus lobata HOM05D000170 ORTHO05D000154 2.3e-06 55.8 73 43.8
RcHm_v2.0_Chr4g0427641 Rosa chinensis HOM05D000170 ORTHO05D000154 2.3e-06 55.8 72 44.4
Atru.chr6.3026 Acer truncatum HOM05D000170 ORTHO05D000154 2.9e-06 55.5 88 34.1
Atru.chr6.3031 Acer truncatum HOM05D000170 ORTHO05D000154 2.9e-06 55.5 76 35.5
Eucgr.K00951 Eucalyptus grandis HOM05D000170 ORTHO05D000154 2.9e-06 55.5 72 40.3
Eucgr.A01846 Eucalyptus grandis HOM05D000170 ORTHO05D000154 3.8e-06 55.1 82 37.8
Eucgr.K00950 Eucalyptus grandis HOM05D000170 ORTHO05D000154 3.8e-06 55.1 82 35.4
QL08p037979 Quercus lobata HOM05D000170 ORTHO05D000154 3.8e-06 55.1 73 41.1
CSS0018617 Camellia sinensis var. sinensis HOM05D000170 ORTHO05D000154 5.0e-06 54.7 67 43.3
Ciclev10005297m.g Citrus clementina HOM05D000170 ORTHO05D000154 6.6e-06 54.3 73 39.7
Haze_13127 Corylus avellana HOM05D000170 ORTHO05D000154 6.6e-06 54.3 80 37.5
TWI75G0979 Tripterygium wilfordii HOM05D000170 ORTHO05D000154 6.6e-06 54.3 72 40.3
FvH4_5g17220 Fragaria vesca HOM05D000170 ORTHO05D000154 8.6e-06 53.9 72 44.4
Manes.11G005000 Manihot esculenta HOM05D000170 ORTHO05D000154 8.6e-06 53.9 72 44.4
TWI18G0690 Tripterygium wilfordii HOM05D000170 ORTHO05D000154 8.6e-06 53.9 72 37.5


User provided reference genes

Program Settings