Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34734 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 1.5e-83 312.8 152 100.0
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 1.7e-34 149.8 125 59.2
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 1.6e-32 143.3 124 58.9
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 2.0e-32 142.9 126 58.7
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 3.5e-32 142.1 126 57.9
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 1.3e-31 140.2 128 55.5
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 1.3e-31 140.2 126 55.6
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 1.7e-31 139.8 126 56.3
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 1.7e-31 139.8 126 56.3
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 2.2e-31 139.4 124 58.1
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 2.9e-31 139.0 126 57.1
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 2.9e-31 139.0 126 56.3
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 5.0e-31 138.3 126 57.1
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 5.0e-31 138.3 127 58.3
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 6.5e-31 137.9 124 57.3
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 6.5e-31 137.9 127 57.5
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 6.5e-31 137.9 127 57.5
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 1.1e-30 137.1 125 56.0
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 1.9e-30 136.3 128 57.0
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 1.9e-30 136.3 126 57.1
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 2.5e-30 136.0 128 57.0
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 5.5e-30 134.8 126 54.8
Glyma.12G162201 Glycine max HOM05D005607 ORTHO05D008142 5.5e-30 134.8 126 57.1
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 7.2e-30 134.4 124 54.8
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 9.4e-30 134.0 128 56.2
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 9.4e-30 134.0 126 55.6
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 9.4e-30 134.0 127 55.9
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 1.2e-29 133.7 126 56.3
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 1.2e-29 133.7 126 55.6
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 1.6e-29 133.3 128 56.2
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 1.6e-29 133.3 124 54.8
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 2.7e-29 132.5 126 52.4
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 3.6e-29 132.1 128 55.5
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 3.6e-29 132.1 126 52.4
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 4.7e-29 131.7 125 53.6
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 8.0e-29 131.0 125 53.6
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 8.0e-29 131.0 128 55.5
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 1.0e-28 130.6 125 52.8
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 1.0e-28 130.6 126 53.2
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 1.0e-28 130.6 117 52.1
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 1.0e-28 130.6 124 51.6
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 1.0e-28 130.6 125 54.4
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 1.4e-28 130.2 123 53.7
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 1.8e-28 129.8 124 50.8
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.8e-28 129.8 124 54.8
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 1.8e-28 129.8 126 53.2
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 1.8e-28 129.8 123 52.0
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 2.3e-28 129.4 126 54.0
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 4.0e-28 128.6 126 53.2
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 4.0e-28 128.6 128 55.5
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 6.8e-28 127.9 125 52.0
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 6.8e-28 127.9 125 56.0
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 8.8e-28 127.5 123 51.2
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 1.2e-27 127.1 127 54.3
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 1.2e-27 127.1 128 54.7
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 2.0e-27 126.3 124 53.2
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 2.6e-27 125.9 126 51.6
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 3.4e-27 125.6 124 53.2
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 5.7e-27 124.8 128 52.3
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 7.5e-27 124.4 126 48.4
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 7.5e-27 124.4 125 53.6
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 9.8e-27 124.0 126 53.2
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 3.7e-26 122.1 128 50.8
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 8.3e-26 120.9 125 51.2
QL08p023973 Quercus lobata HOM05D005607 ORTHO05D008142 8.3e-26 120.9 125 50.4
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 1.8e-25 119.8 128 51.6
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 2.4e-25 119.4 126 51.6
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 3.1e-25 119.0 128 49.2
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 4.1e-25 118.6 124 50.8
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 5.4e-25 118.2 128 50.8
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 5.4e-25 118.2 128 50.8
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 9.1e-25 117.5 124 44.4
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 9.1e-25 117.5 120 51.7
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 9.1e-25 117.5 128 51.6
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 1.2e-24 117.1 124 51.6
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.6e-24 116.7 116 54.3
Peaxi162Scf00069g01838 Petunia axillaris HOM05D005607 ORTHO05D008142 2.0e-24 116.3 124 51.6
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 3.5e-24 115.5 128 48.4
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 4.5e-24 115.2 125 50.4
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 4.5e-24 115.2 117 51.3
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 4.5e-24 115.2 124 50.0
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 4.5e-24 115.2 124 50.0
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 5.9e-24 114.8 124 50.0
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 7.7e-24 114.4 124 50.0
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 1.3e-23 113.6 118 52.5
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 1.7e-23 113.2 126 50.0
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 2.2e-23 112.8 153 43.8
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 2.9e-23 112.5 126 50.8
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 5.0e-23 111.7 123 49.6
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 6.5e-23 111.3 124 50.0
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 8.5e-23 110.9 165 41.8
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.5e-22 110.2 116 52.6
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 1.9e-22 109.8 94 60.6
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 2.5e-22 109.4 116 46.6
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 1.7e-18 96.7 93 48.4
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 2.2e-18 96.3 111 44.1
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 8.3e-18 94.4 128 45.3
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 1.1e-17 94.0 121 46.3
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 1.6e-16 90.1 138 42.8
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 2.7e-16 89.4 126 35.7
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 1.0e-15 87.4 55 65.5
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 6.6e-15 84.7 65 61.5
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 9.8e-11 70.9 62 50.0
EL10Ac6g14983 Beta vulgaris HOM05D005607 ORTHO05D008142 1.7e-07 60.1 56 46.4
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 7.3e-06 54.7 53 45.3


User provided reference genes

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