Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 4.9e-165 584.3 285 100.0
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 9.8e-121 437.2 274 73.4
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 2.8e-120 435.6 272 74.3
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 3.5e-118 428.7 273 73.6
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 1.0e-117 427.2 274 70.4
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 1.3e-117 426.8 273 72.5
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 3.8e-117 425.2 273 71.4
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 3.8e-117 425.2 271 71.2
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 5.0e-117 424.9 274 71.2
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 5.0e-117 424.9 273 71.4
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 1.5e-116 423.3 274 71.2
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 1.5e-116 423.3 273 72.2
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 2.5e-116 422.5 273 71.8
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 3.3e-116 422.2 273 72.2
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 4.2e-116 421.8 271 72.7
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 4.2e-116 421.8 279 69.9
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 5.5e-116 421.4 273 72.2
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 1.2e-115 420.2 273 71.1
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 2.1e-115 419.5 274 71.2
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 2.1e-115 419.5 271 70.5
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 2.8e-115 419.1 276 70.3
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 2.8e-115 419.1 276 70.3
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 3.6e-115 418.7 273 70.3
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 3.6e-115 418.7 271 71.2
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 4.7e-115 418.3 274 70.8
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 4.7e-115 418.3 274 70.8
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 4.7e-115 418.3 272 71.0
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 4.7e-115 418.3 272 71.7
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 8.0e-115 417.5 276 69.6
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 8.0e-115 417.5 273 71.1
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 8.0e-115 417.5 273 70.7
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.0e-114 417.2 274 70.8
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 1.0e-114 417.2 271 70.1
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 1.0e-114 417.2 271 71.2
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 1.0e-114 417.2 271 70.1
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 1.8e-114 416.4 271 70.1
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 1.8e-114 416.4 273 69.6
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.3e-114 416.0 273 70.0
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 2.3e-114 416.0 273 69.2
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 3.0e-114 415.6 272 71.7
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 3.0e-114 415.6 276 69.9
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 4.0e-114 415.2 268 71.6
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 4.0e-114 415.2 273 70.0
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 5.2e-114 414.8 271 69.7
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 6.8e-114 414.5 273 69.6
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 6.8e-114 414.5 273 69.6
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 6.8e-114 414.5 272 71.3
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 8.9e-114 414.1 273 70.0
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 8.9e-114 414.1 275 68.7
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 1.5e-113 413.3 270 70.0
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 2.0e-113 412.9 261 72.0
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 2.0e-113 412.9 273 69.2
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 2.0e-113 412.9 274 70.8
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 2.6e-113 412.5 271 68.6
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.6e-113 412.5 273 68.9
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 4.4e-113 411.8 268 69.8
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 4.4e-113 411.8 268 69.8
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 4.4e-113 411.8 271 70.8
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 4.4e-113 411.8 271 70.1
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 5.7e-113 411.4 270 70.7
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 5.7e-113 411.4 270 70.0
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 7.5e-113 411.0 273 69.6
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 7.5e-113 411.0 273 69.2
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 7.5e-113 411.0 273 69.2
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 1.3e-112 410.2 273 69.2
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.3e-112 410.2 273 69.6
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 1.3e-112 410.2 270 69.3
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 2.2e-112 409.5 271 70.1
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 2.8e-112 409.1 273 69.2
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 2.8e-112 409.1 275 70.2
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 3.7e-112 408.7 271 70.1
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 6.3e-112 407.9 273 68.9
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 8.3e-112 407.5 270 70.4
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 1.1e-111 407.1 271 68.3
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 1.4e-111 406.8 271 67.9
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 1.4e-111 406.8 271 69.7
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 1.4e-111 406.8 273 67.8
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 1.4e-111 406.8 275 68.0
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 2.4e-111 406.0 271 69.7
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 3.1e-111 405.6 302 64.2
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 3.1e-111 405.6 273 70.3
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 4.1e-111 405.2 273 69.2
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 5.4e-111 404.8 271 69.4
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 9.2e-111 404.1 271 68.6
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.7e-110 402.5 273 68.9
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 7.8e-110 401.0 273 66.7
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 1.0e-109 400.6 271 66.4
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 1.0e-109 400.6 271 66.4
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 1.7e-109 399.8 273 66.3
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 1.7e-109 399.8 273 66.3
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 2.9e-109 399.1 273 65.9
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 2.9e-109 399.1 273 65.9
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 3.8e-109 398.7 273 66.3
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 5.0e-109 398.3 270 66.7
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 6.6e-109 397.9 313 62.0
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 1.1e-108 397.1 273 65.6
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.1e-108 397.1 276 67.8
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 1.9e-108 396.4 273 65.9
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 2.5e-108 396.0 315 59.7
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 3.3e-108 395.6 273 65.9
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.2e-107 393.7 275 66.9
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 2.8e-107 392.5 272 66.5
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 4.7e-107 391.7 273 65.2
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 8.0e-107 391.0 275 66.9
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 2.3e-106 389.4 270 67.4
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 8.9e-106 387.5 273 68.1
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 2.2e-104 382.9 271 62.7
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 2.2e-104 382.9 271 62.7
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 3.7e-104 382.1 271 62.7
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 3.7e-104 382.1 271 62.7
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 1.1e-103 380.6 272 62.1
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 1.9e-103 379.8 275 64.4
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 4.6e-102 375.2 273 66.3
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 6.6e-101 371.3 273 64.8
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 8.0e-99 364.4 223 78.0
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 5.2e-98 361.7 232 71.6
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 1.5e-97 360.1 271 62.0
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 6.4e-96 354.8 273 62.6
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 3.5e-78 295.8 308 51.6
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 9.6e-76 287.7 183 72.1
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 5.3e-74 282.0 269 48.0
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 5.8e-73 278.5 201 65.2
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 9.9e-73 277.7 190 65.8
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 3.8e-72 275.8 282 50.4
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 5.4e-71 271.9 173 70.5
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 9.3e-71 271.2 176 71.6
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 7.3e-68 261.5 276 48.9
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 1.7e-64 250.4 279 45.2
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 1.3e-45 187.6 156 59.0
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 3.0e-45 186.4 294 38.4
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 6.9e-42 175.3 223 43.9
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 9.0e-42 174.9 221 44.3
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.1e-34 149.8 101 67.3
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 6.9e-34 148.7 101 66.3
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.2e-32 143.7 97 67.0
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 2.0e-28 130.6 87 70.1
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 4.2e-23 112.8 76 67.1
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.8e-16 89.7 97 48.5
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 5.5e-15 85.9 164 33.5
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 1.2e-09 68.2 51 56.9
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 6.1e-06 55.8 40 62.5


User provided reference genes

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