Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34680 Sequoiadendron giganteum HOM05D003323 ORTHO05D384369 4.7e-163 577.8 290 100.0
SEGI_29410 Sequoiadendron giganteum HOM05D003323 ORTHO05D003726 2.3e-48 196.8 164 64.0
SEGI_09946 Sequoiadendron giganteum HOM05D003323 ORTHO05D003726 6.8e-29 132.1 113 62.8
Os07g0683900 Oryza sativa ssp. japonica HOM05D003323 ORTHO05D003726 3.3e-15 86.7 297 29.0
Zm00001eb330880 Zea mays HOM05D003323 ORTHO05D003726 7.3e-15 85.5 286 28.0
SEGI_27346 Sequoiadendron giganteum HOM05D003323 ORTHO05D003726 1.7e-11 74.3 156 36.5
SEGI_18397 Sequoiadendron giganteum HOM05D003323 ORTHO05D003726 8.4e-11 72.0 156 35.9
SEGI_11158 Sequoiadendron giganteum HOM05D003323 ORTHO05D003726 1.1e-10 71.6 156 35.9
SEGI_20983 Sequoiadendron giganteum HOM05D003323 ORTHO05D003726 2.4e-10 70.5 155 35.5
ATR0048G048 Amborella trichopoda HOM05D003323 ORTHO05D003726 3.2e-10 70.1 151 33.1
Lsat_1_v5_gn_2_58781 Lactuca sativa HOM05D003323 ORTHO05D003726 4.2e-10 69.7 133 39.8
arahy.Tifrunner.gnm1.ann1.P6Q6NG Arachis hypogaea HOM05D003323 ORTHO05D003726 1.6e-09 67.8 118 40.7
Actinidia30567 Actinidia chinensis HOM05D003323 ORTHO05D003726 2.1e-09 67.4 155 34.2
Lj1A1139G46 Lonicera japonica HOM05D003323 ORTHO05D003726 2.7e-09 67.0 149 36.9
arahy.Tifrunner.gnm1.ann1.1BJ025 Arachis hypogaea HOM05D003323 ORTHO05D003726 3.5e-09 66.6 118 39.8
SEGI_37521 Sequoiadendron giganteum HOM05D003323 ORTHO05D003726 3.5e-09 66.6 157 35.0
Actinidia22097 Actinidia chinensis HOM05D003323 ORTHO05D003726 4.6e-09 66.2 151 34.4
ECA238G3705 Erigeron canadensis HOM05D001256 ORTHO05D003726 7.9e-09 65.5 128 40.6
HanXRQChr14g0437961 Helianthus annuus HOM05D003323 ORTHO05D003726 7.9e-09 65.5 134 38.1
Sp4g21410 Schrenkiella parvula HOM05D003323 ORTHO05D003726 1.3e-08 64.7 153 35.9
Hma1.2p1_0044F.1_g026200 Hydrangea macrophylla HOM05D003323 ORTHO05D003726 3.0e-08 63.5 151 35.1
Lalb_Chr22g0359241 Lupinus albus HOM05D003323 ORTHO05D003726 3.9e-08 63.2 115 36.5
Potri.013G054100 Populus trichocarpa HOM05D003323 ORTHO05D003726 3.9e-08 63.2 149 36.2
Oeu048439.1 Olea europaea HOM05D003323 ORTHO05D003726 5.1e-08 62.8 151 35.1
THA.LOC104805794 Tarenaya hassleriana HOM05D003323 ORTHO05D003726 5.1e-08 62.8 151 33.1
AT2G39050 Arabidopsis thaliana HOM05D003323 ORTHO05D003726 6.7e-08 62.4 151 35.8
CARHR133820 Cardamine hirsuta HOM05D003323 ORTHO05D003726 6.7e-08 62.4 151 35.8
SGA_v2.0_scaffold326G48704 Striga asiatica HOM05D003323 ORTHO05D003726 6.7e-08 62.4 117 39.3
Thhalv10016926m.g Eutrema salsugineum HOM05D003323 ORTHO05D003726 1.5e-07 61.2 153 35.3
SGA_v2.0_scaffold374G50226 Striga asiatica HOM05D003323 ORTHO05D003726 1.9e-07 60.8 91 41.8
Carub.0004s2111 Capsella rubella HOM05D003323 ORTHO05D003726 2.5e-07 60.5 151 35.1
Medtr7g085240 Medicago truncatula HOM05D003323 ORTHO05D003726 2.5e-07 60.5 115 34.8
SalBow8G1550 Salvia bowleyana HOM05D003323 ORTHO05D003726 2.5e-07 60.5 151 35.1
MD14G1001100 Malus domestica HOM05D003323 ORTHO05D003726 3.3e-07 60.1 170 33.5
Nitab4.5_0001364g0100 Nicotiana tabacum HOM05D003323 ORTHO05D003726 3.3e-07 60.1 151 33.1
Thecc.05G259200 Theobroma cacao HOM05D003323 ORTHO05D003726 3.3e-07 60.1 151 35.1
TWI32G0068 Tripterygium wilfordii HOM05D003323 ORTHO05D003726 3.3e-07 60.1 136 34.6
Rhsim01G0232200 Rhododendron simsii HOM05D003323 ORTHO05D003726 4.3e-07 59.7 91 41.8
VMungo1383G0739 Vigna mungo HOM05D003323 ORTHO05D003726 4.3e-07 59.7 155 32.9
Migut.N00506 Erythranthe guttata HOM05D003323 ORTHO05D003726 5.6e-07 59.3 125 36.0
Gohir.A13G101900 Gossypium hirsutum HOM05D003323 ORTHO05D003726 5.6e-07 59.3 151 34.4
Gorai.013G118100 Gossypium raimondii HOM05D003323 ORTHO05D003726 5.6e-07 59.3 169 33.7
Peaxi162Scf00076g00717 Petunia axillaris HOM05D003323 ORTHO05D003726 5.6e-07 59.3 135 34.1
CAN.G700.16 Capsicum annuum HOM05D003323 ORTHO05D003726 7.4e-07 58.9 151 33.8
Duzib128G0950 Durio zibethinus HOM05D003323 ORTHO05D003726 9.6e-07 58.5 151 34.4
Eucgr.A02073 Eucalyptus grandis HOM05D003323 ORTHO05D003726 9.6e-07 58.5 115 37.4
Lj1g0017895 Lotus japonicus HOM05D003323 ORTHO05D003726 9.6e-07 58.5 115 37.4
Lsat_1_v5_gn_6_38181 Lactuca sativa HOM05D003323 ORTHO05D003726 1.3e-06 58.2 142 33.1
Phvul.001G100400 Phaseolus vulgaris HOM05D003323 ORTHO05D003726 1.3e-06 58.2 121 35.5
Solyc01g010750.4 Solanum lycopersicum HOM05D003323 ORTHO05D003726 1.3e-06 58.2 108 36.1
Glyma.16G043100 Glycine max HOM05D003323 ORTHO05D003726 1.6e-06 57.8 121 34.7
PGSC0003DMG401000859 Solanum tuberosum HOM05D003323 ORTHO05D003726 1.6e-06 57.8 108 36.1
ECA238G1632 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.1e-06 57.4 137 35.8
Glyma.19G109000 Glycine max HOM05D003323 ORTHO05D003726 2.1e-06 57.4 123 35.8
Gohir.1Z049450 Gossypium hirsutum HOM05D003323 ORTHO05D003726 3.7e-06 56.6 151 33.8
Gohir.1Z049550 Gossypium hirsutum HOM05D003323 ORTHO05D003726 3.7e-06 56.6 151 33.8
Psat3g090320 Pisum sativum HOM05D003323 ORTHO05D003726 3.7e-06 56.6 115 33.9
CAN.G649.8 Capsicum annuum HOM05D003323 ORTHO05D003726 6.2e-06 55.8 155 29.0
Manes.08G147900 Manihot esculenta HOM05D003323 ORTHO05D003726 6.2e-06 55.8 91 41.8
Ciclev10021104m.g Citrus clementina HOM05D003323 ORTHO05D003726 8.1e-06 55.5 112 36.6
Os03g0327600 Oryza sativa ssp. japonica HOM05D003323 ORTHO05D003726 8.1e-06 55.5 125 34.4


User provided reference genes

Program Settings