Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34626 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 1.4e-72 276.2 135 100.0
SEGI_01694 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 6.0e-44 181.0 180 57.8
SEGI_07702 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 3.9e-43 178.3 143 69.9
SEGI_30807 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 1.8e-40 169.5 183 56.3
SEGI_17436 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 2.0e-39 166.0 177 57.1
SEGI_04127 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 6.4e-38 161.0 80 95.0
SEGI_01355 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 2.4e-37 159.1 175 55.4
SEGI_36162 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 2.7e-36 155.6 80 92.5
SEGI_13198 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 1.2e-33 146.7 85 84.7
SEGI_39102 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 1.6e-33 146.4 133 60.2
SEGI_30647 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 5.2e-32 141.4 81 85.2
SEGI_33962 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 4.4e-31 138.3 81 82.7
SEGI_34213 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 2.2e-30 136.0 80 85.0
SEGI_09150 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 1.9e-29 132.9 81 81.5
SEGI_40792 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 2.3e-27 125.9 81 79.0
SEGI_03565 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 4.3e-26 121.7 62 95.2
SEGI_31988 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 1.4e-24 116.7 60 95.0
SEGI_16419 Sequoiadendron giganteum HOM05D001986 ORTHO05D002283 2.6e-23 112.5 62 88.7
SEGI_34581 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 1.8e-19 99.8 56 87.5
SEGI_01558 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 3.3e-18 95.5 54 87.0
SEGI_39023 Sequoiadendron giganteum HOM05D001986 ORTHO05D002283 1.7e-14 83.2 60 70.0
SEGI_16305 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 3.8e-14 82.0 43 95.3
Pp3c17_17300 Physcomitrium patens HOM05D001986 ORTHO05D012227 9.3e-13 77.4 62 61.3
Mapoly0026s0001 Marchantia polymorpha HOM05D001986 ORTHO05D002283 2.1e-12 76.3 123 38.2
Pp3c14_15450 Physcomitrium patens HOM05D001986 ORTHO05D002283 2.7e-12 75.9 61 59.0
FAN03G1061 Fragaria x ananassa HOM05D001986 ORTHO05D002283 5.1e-11 71.6 74 44.6
FAN06G0884 Fragaria x ananassa HOM05D001986 ORTHO05D002283 5.1e-11 71.6 74 44.6
FvH4_7g24140 Fragaria vesca HOM05D001986 ORTHO05D002283 8.7e-11 70.9 74 44.6
SMO116G0286 Selaginella moellendorffii HOM05D001986 ORTHO05D002283 1.1e-10 70.5 55 56.4
CDE03G0210 Ceratophyllum demersum HOM05D001986 ORTHO05D002283 1.5e-10 70.1 69 47.8
Pp3c1_4470 Physcomitrium patens HOM05D001986 ORTHO05D002283 2.5e-10 69.3 61 57.4
CDE04G2724 Ceratophyllum demersum HOM05D001986 ORTHO05D009285 3.3e-10 68.9 60 53.3
Manes.07G126800 Manihot esculenta HOM05D001986 ORTHO05D002283 3.3e-10 68.9 71 46.5
RcHm_v2.0_Chr1g0369571 Rosa chinensis HOM05D001986 ORTHO05D002283 3.3e-10 68.9 74 41.9
CSS0017587 Camellia sinensis var. sinensis HOM05D001986 ORTHO05D002283 4.3e-10 68.6 65 55.4
SMO367G1125 Selaginella moellendorffii HOM05D001986 ORTHO05D024961 5.6e-10 68.2 63 52.4
MD01G1148600 Malus domestica HOM05D001986 ORTHO05D002283 9.6e-10 67.4 74 44.6
Aqoxy4G02635 Aquilegia oxysepala HOM05D001986 ORTHO05D002283 1.3e-09 67.0 64 50.0
Dinv20978 Davidia involucrata HOM05D001986 ORTHO05D002283 1.3e-09 67.0 88 40.9
CANSAT54G2602 Cannabis sativa HOM05D001986 ORTHO05D002283 3.7e-09 65.5 77 42.9
CiPaw.02G190800 Carya illinoinensis HOM05D001986 ORTHO05D002283 6.2e-09 64.7 78 42.3
Eucgr.J01926 Eucalyptus grandis HOM05D001986 ORTHO05D012227 6.2e-09 64.7 62 54.8
TAR623G0550 Trochodendron aralioides HOM05D001986 ORTHO05D002283 6.2e-09 64.7 66 50.0
TAR623G0633 Trochodendron aralioides HOM05D001986 ORTHO05D002283 6.2e-09 64.7 66 50.0
MSTRG.8318 Avicennia marina HOM05D001986 ORTHO05D002283 1.1e-08 63.9 65 52.3
Gohir.A06G178600 Gossypium hirsutum HOM05D001986 ORTHO05D002283 1.4e-08 63.5 66 47.0
Nn2g11423 Nelumbo nucifera HOM05D001986 ORTHO05D002283 1.4e-08 63.5 66 47.0
Lj1A952T45 Lonicera japonica HOM05D001986 ORTHO05D002283 1.8e-08 63.2 82 41.5
MD07G1215600 Malus domestica HOM05D001986 ORTHO05D002283 2.4e-08 62.8 73 42.5
PSO801G0225 Papaver somniferum HOM05D001986 ORTHO05D002283 2.4e-08 62.8 64 50.0
unitig_60.g25680 Utricularia gibba HOM05D001986 ORTHO05D002283 2.4e-08 62.8 63 50.8
AagrBONN_evm.TU.Sc2ySwM_344.3460 Anthoceros agrestis HOM05D001986 ORTHO05D002283 3.1e-08 62.4 59 50.8
Lj6g0026845 Lotus japonicus HOM05D001986 ORTHO05D002283 3.1e-08 62.4 57 54.4
THA.LOC104810716 Tarenaya hassleriana HOM05D001986 ORTHO05D002283 3.1e-08 62.4 78 42.3
Gohir.A06G164250 Gossypium hirsutum HOM05D001986 ORTHO05D002283 4.0e-08 62.0 66 48.5
Gorai.010G204100 Gossypium raimondii HOM05D001986 ORTHO05D002283 4.0e-08 62.0 66 47.0
Manes.10G016300 Manihot esculenta HOM05D001986 ORTHO05D002283 4.0e-08 62.0 63 49.2
TWI53G0575 Tripterygium wilfordii HOM05D001986 ORTHO05D002283 4.0e-08 62.0 61 45.9
AL5G26320 Arabidopsis lyrata HOM05D001986 ORTHO05D002283 5.3e-08 61.6 72 43.1
CANSAT56G3655 Cannabis sativa HOM05D001986 ORTHO05D002283 5.3e-08 61.6 74 43.2
PSO339G2754 Papaver somniferum HOM05D001986 ORTHO05D002283 5.3e-08 61.6 64 48.4
QL01p037599 Quercus lobata HOM05D001986 ORTHO05D002283 5.3e-08 61.6 104 39.4
GSVIVG01032859001 Vitis vinifera HOM05D001986 ORTHO05D002283 5.3e-08 61.6 75 45.3
CsaV3_6G016330 Cucumis sativus L. HOM05D001986 ORTHO05D002283 6.9e-08 61.2 51 62.7
Dinv34413 Davidia involucrata HOM05D001986 ORTHO05D002283 6.9e-08 61.2 61 50.8
Gohir.D06G174450 Gossypium hirsutum HOM05D001986 ORTHO05D002283 6.9e-08 61.2 66 47.0
Duzib114G0515 Durio zibethinus HOM05D001986 ORTHO05D002283 9.0e-08 60.8 65 49.2
AT3G47080 Arabidopsis thaliana HOM05D001986 ORTHO05D002283 1.2e-07 60.5 71 42.3
Prupe.2G247500 Prunus persica HOM05D001986 ORTHO05D002283 1.2e-07 60.5 71 40.8
Rhsim13G0071200 Rhododendron simsii HOM05D001986 ORTHO05D002283 1.2e-07 60.5 100 36.0
Haze_17195 Corylus avellana HOM05D001986 ORTHO05D002283 2.0e-07 59.7 75 40.0
FAN01G0590 Fragaria x ananassa HOM05D001986 ORTHO05D012227 2.0e-07 59.7 107 31.8
unitig_8.g3688 Utricularia gibba HOM05D001986 ORTHO05D002283 2.0e-07 59.7 67 44.8
Atru.chr12.3 Acer truncatum HOM05D001986 ORTHO05D002283 2.6e-07 59.3 59 50.8
Cpa.g.sc19.205 Carica papaya HOM05D001986 ORTHO05D002283 3.4e-07 58.9 66 43.9
MELO3C025863.2 Cucumis melo HOM05D001986 ORTHO05D002283 3.4e-07 58.9 50 62.0
Dinv21027 Davidia involucrata HOM05D001986 ORTHO05D002283 3.4e-07 58.9 81 38.3
Oeu032748.1 Olea europaea HOM05D001986 ORTHO05D002283 3.4e-07 58.9 53 54.7
Oeu032750.1 Olea europaea HOM05D001986 ORTHO05D002283 3.4e-07 58.9 53 54.7
TWI09G0091 Tripterygium wilfordii HOM05D001986 ORTHO05D002283 3.4e-07 58.9 64 45.3
FAN10G4253 Fragaria x ananassa HOM05D001986 ORTHO05D002283 4.5e-07 58.5 56 46.4
Sed0017568 Sechium edule HOM05D001986 ORTHO05D002283 4.5e-07 58.5 72 41.7
ATR0618G436 Amborella trichopoda HOM05D001986 ORTHO05D002283 5.8e-07 58.2 61 50.8
Migut.N00811 Erythranthe guttata HOM05D001986 ORTHO05D002283 5.8e-07 58.2 66 42.4
Sabra10G0147400 Salix brachista HOM05D001986 ORTHO05D002283 5.8e-07 58.2 61 50.8
Cc02_g06800 Coffea canephora HOM05D001986 ORTHO05D002283 7.6e-07 57.8 58 50.0
DCAR_011796 Daucus carota HOM05D001986 ORTHO05D002283 7.6e-07 57.8 59 49.2
ClCG02G019650 Citrullus lanatus HOM05D001986 ORTHO05D002283 1.0e-06 57.4 49 61.2
Manes.02G120700 Manihot esculenta HOM05D001986 ORTHO05D002283 1.0e-06 57.4 57 49.1
CDE02G2111 Ceratophyllum demersum HOM05D001986 ORTHO05D002283 1.3e-06 57.0 57 47.4
AUR62001672 Chenopodium quinoa HOM05D001986 ORTHO05D002283 1.3e-06 57.0 61 47.5
Migut.F01415 Erythranthe guttata HOM05D001986 ORTHO05D002283 1.3e-06 57.0 56 50.0
Hund15968 Selenicereus undatus HOM05D001986 ORTHO05D002283 1.7e-06 56.6 65 50.8
Sc21g0006260 Simmondsia chinensis HOM05D001986 ORTHO05D002283 1.7e-06 56.6 64 46.9
HPP92_018220 Vanilla planifolia HOM05D001986 ORTHO05D002283 2.2e-06 56.2 61 42.6
BcaC07g42456 Brassica carinata HOM05D001986 ORTHO05D002283 2.9e-06 55.8 55 47.3
CDE02G4044 Ceratophyllum demersum HOM05D001986 ORTHO05D002283 2.9e-06 55.8 60 48.3
Manes.01G163200 Manihot esculenta HOM05D001986 ORTHO05D002283 2.9e-06 55.8 53 50.9
TWI75G1654 Tripterygium wilfordii HOM05D001986 ORTHO05D002283 2.9e-06 55.8 64 42.2
Sc12g0000940 Simmondsia chinensis HOM05D001986 ORTHO05D002283 3.8e-06 55.5 60 46.7
HPP92_018198 Vanilla planifolia HOM05D001986 ORTHO05D002283 3.8e-06 55.5 61 41.0
HanXRQChr01g0011391 Helianthus annuus HOM05D001986 ORTHO05D002283 4.9e-06 55.1 56 46.4
MBI14_g09431_MAGBIO Magnolia biondii HOM05D001986 ORTHO05D002283 6.5e-06 54.7 50 58.0
Pp3c11_5230 Physcomitrium patens HOM05D001986 ORTHO05D002283 6.5e-06 54.7 51 52.9
vmacro14587 Vaccinium macrocarpon HOM05D001986 ORTHO05D002283 6.5e-06 54.7 61 44.3
Ah.16g103290 Amaranthus hybridus HOM05D001986 ORTHO05D002283 8.4e-06 54.3 67 44.8
CAN.G394.116 Capsicum annuum HOM05D001986 ORTHO05D002283 8.4e-06 54.3 64 43.8
CAN.G503.6 Capsicum annuum HOM05D001986 ORTHO05D002283 8.4e-06 54.3 63 44.4
HanXRQChr05g0135741 Helianthus annuus HOM05D001986 ORTHO05D002283 8.4e-06 54.3 54 50.0
Sed0020893 Sechium edule HOM05D001986 ORTHO05D002283 8.4e-06 54.3 64 45.3


User provided reference genes

Program Settings