Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34578 Sequoiadendron giganteum HOM05D003998 ORTHO05D005144 3.3e-192 674.9 337 100.0
ATR0605G199 Amborella trichopoda HOM05D003998 ORTHO05D005144 9.7e-35 151.8 135 55.6
MBI11_g07440_MAGBIO Magnolia biondii HOM05D003998 ORTHO05D005144 1.6e-29 134.4 136 51.5
Pp3c17_2650 Physcomitrium patens HOM05D003998 ORTHO05D005144 3.3e-27 126.7 129 45.7
CiPaw.01G118500 Carya illinoinensis HOM05D003998 ORTHO05D005144 1.7e-26 124.4 176 40.9
Sopen09g035020 Solanum pennellii HOM05D003998 ORTHO05D005144 2.8e-26 123.6 191 38.7
Sed0015957 Sechium edule HOM05D003998 ORTHO05D005144 1.8e-25 120.9 157 45.2
PGR083G0268 Punica granatum HOM05D003998 ORTHO05D005144 2.4e-25 120.6 109 55.0
Solyc09g092140.3 Solanum lycopersicum HOM05D003998 ORTHO05D005144 4.1e-25 119.8 191 37.2
EL10Ac3g07474 Beta vulgaris HOM05D003998 ORTHO05D005144 5.3e-25 119.4 170 40.6
Cfa014947 Carpinus fangiana HOM05D003998 ORTHO05D005144 9.1e-25 118.6 129 47.3
Eucgr.H02738 Eucalyptus grandis HOM05D003998 ORTHO05D005144 1.2e-24 118.2 118 50.0
Peaxi162Scf00047g00340 Petunia axillaris HOM05D003998 ORTHO05D005144 1.6e-24 117.9 128 48.4
TAR362G0495 Trochodendron aralioides HOM05D003998 ORTHO05D005144 3.5e-24 116.7 129 45.7
CSS0005254 Camellia sinensis var. sinensis HOM05D003998 ORTHO05D005144 5.9e-24 115.9 139 46.8
COL.COLO4_20194 Corchorus olitorius HOM05D003998 ORTHO05D005144 5.9e-24 115.9 160 39.4
Manes.15G055500 Manihot esculenta HOM05D003998 ORTHO05D005144 5.9e-24 115.9 132 45.5
RcHm_v2.0_Chr4g0414141 Rosa chinensis HOM05D003998 ORTHO05D005144 5.9e-24 115.9 126 47.6
FvH4_4g13510 Fragaria vesca HOM05D003998 ORTHO05D005144 7.7e-24 115.5 118 48.3
ClCG05G003230 Citrullus lanatus HOM05D003998 ORTHO05D005144 1.0e-23 115.2 134 46.3
Haze_11635 Corylus avellana HOM05D003998 ORTHO05D005144 1.0e-23 115.2 138 43.5
Duzib151G0324 Durio zibethinus HOM05D003998 ORTHO05D005144 1.3e-23 114.8 141 44.0
Nitab4.5_0000401g0150 Nicotiana tabacum HOM05D003998 ORTHO05D005144 1.3e-23 114.8 154 40.9
CsaV3_3G010860 Cucumis sativus L. HOM05D003998 ORTHO05D005144 1.7e-23 114.4 134 44.0
FAN12G4114 Fragaria x ananassa HOM05D003998 ORTHO05D005144 1.7e-23 114.4 118 48.3
Os04g0379300 Oryza sativa ssp. japonica HOM05D003998 ORTHO05D005144 1.7e-23 114.4 112 47.3
PGSC0003DMG400026420 Solanum tuberosum HOM05D003998 ORTHO05D005144 2.2e-23 114.0 191 36.1
Nitab4.5_0004231g0010 Nicotiana tabacum HOM05D003998 ORTHO05D005144 2.9e-23 113.6 154 40.9
Actinidia35854 Actinidia chinensis HOM05D003998 ORTHO05D005144 3.8e-23 113.2 144 43.8
CAN.G1648.3 Capsicum annuum HOM05D003998 ORTHO05D005144 3.8e-23 113.2 175 37.7
FAN22G0959 Fragaria x ananassa HOM05D003998 ORTHO05D005144 3.8e-23 113.2 118 47.5
Aqoxy2G03902 Aquilegia oxysepala HOM05D003998 ORTHO05D005144 8.5e-23 112.1 147 42.2
Atru.chr4.1608 Acer truncatum HOM05D003998 ORTHO05D005144 1.1e-22 111.7 143 44.1
QL06p026526 Quercus lobata HOM05D003998 ORTHO05D005144 1.1e-22 111.7 151 41.7
Sabra16G0201000 Salix brachista HOM05D003998 ORTHO05D005144 1.1e-22 111.7 129 46.5
Thecc.04G198600 Theobroma cacao HOM05D003998 ORTHO05D005144 1.5e-22 111.3 141 41.8
AagrBONN_evm.TU.Sc2ySwM_117.2891 Anthoceros agrestis HOM05D003998 ORTHO05D005144 1.9e-22 110.9 173 32.9
Pp3c8_4600 Physcomitrium patens HOM05D003998 ORTHO05D005144 2.5e-22 110.5 129 42.6
Ah.13g078040 Amaranthus hybridus HOM05D003998 ORTHO05D005144 5.5e-22 109.4 125 43.2
GSVIVG01020986001 Vitis vinifera HOM05D003998 ORTHO05D005144 5.5e-22 109.4 135 43.7
PSO017G6005 Papaver somniferum HOM05D003998 ORTHO05D005144 7.2e-22 109.0 152 37.5
Ciclev10004378m.g Citrus clementina HOM05D003998 ORTHO05D005144 9.4e-22 108.6 194 36.6
Lj6C491G2 Lonicera japonica HOM05D003998 ORTHO05D005144 1.2e-21 108.2 121 47.1
Potri.001G317700 Populus trichocarpa HOM05D003998 ORTHO05D005144 1.2e-21 108.2 129 45.7
MELO3C006304.2 Cucumis melo HOM05D003998 ORTHO05D005144 1.6e-21 107.8 134 41.0
Lj6A454G39 Lonicera japonica HOM05D003998 ORTHO05D005144 1.6e-21 107.8 121 47.1
Sc13g0000280 Simmondsia chinensis HOM05D003998 ORTHO05D005144 1.6e-21 107.8 118 47.5
vmacro00453 Vaccinium macrocarpon HOM05D003998 ORTHO05D005144 1.6e-21 107.8 118 47.5
MD01G1010300 Malus domestica HOM05D003998 ORTHO05D005144 2.1e-21 107.5 149 41.6
MD04G1013700 Malus domestica HOM05D003998 ORTHO05D005144 2.1e-21 107.5 149 41.6
SalBow3G3008 Salvia bowleyana HOM05D003998 ORTHO05D005144 2.1e-21 107.5 128 45.3
Zm00001eb420660 Zea mays HOM05D003998 ORTHO05D005144 2.7e-21 107.1 106 50.0
Prupe.1G159900 Prunus persica HOM05D003998 ORTHO05D005144 6.1e-21 105.9 153 39.2
Hund24398 Selenicereus undatus HOM05D003998 ORTHO05D005144 6.1e-21 105.9 165 39.4
DCAR_026634 Daucus carota HOM05D003998 ORTHO05D005144 8.0e-21 105.5 129 43.4
Phvul.003G050000 Phaseolus vulgaris HOM05D003998 ORTHO05D005144 8.0e-21 105.5 157 39.5
HanXRQChr15g0488261 Helianthus annuus HOM05D003998 ORTHO05D005144 1.0e-20 105.1 134 44.8
Rhsim09G0058600 Rhododendron simsii HOM05D003998 ORTHO05D005144 1.0e-20 105.1 118 44.9
Cpa.g.sc83.25 Carica papaya HOM05D003998 ORTHO05D005144 1.4e-20 104.8 107 51.4
Glyma.08G111100 Glycine max HOM05D003998 ORTHO05D005144 1.4e-20 104.8 139 41.7
MSTRG.21978 Avicennia marina HOM05D003998 ORTHO05D005144 1.8e-20 104.4 115 47.0
PSO063G6533 Papaver somniferum HOM05D003998 ORTHO05D005144 1.8e-20 104.4 164 35.4
TWI53G1682 Tripterygium wilfordii HOM05D003998 ORTHO05D005144 1.8e-20 104.4 132 43.9
Lsat_1_v5_gn_2_46500 Lactuca sativa HOM05D003998 ORTHO05D005144 2.3e-20 104.0 107 50.5
Glyma.05G153400 Glycine max HOM05D003998 ORTHO05D005144 4.0e-20 103.2 129 42.6
Gohir.A02G020406 Gossypium hirsutum HOM05D003998 ORTHO05D005144 5.2e-20 102.8 130 42.3
Mapoly0151s0004 Marchantia polymorpha HOM05D003998 ORTHO05D005144 5.2e-20 102.8 130 36.2
Lj4g0023654 Lotus japonicus HOM05D003998 ORTHO05D005144 6.7e-20 102.4 140 40.7
AUR62018577 Chenopodium quinoa HOM05D003998 ORTHO05D005144 8.8e-20 102.1 167 35.3
THA.LOC104826185 Tarenaya hassleriana HOM05D003998 ORTHO05D005144 8.8e-20 102.1 127 47.2
Gohir.A01G175301 Gossypium hirsutum HOM05D003998 ORTHO05D005144 1.1e-19 101.7 130 41.5
Gohir.A03G104400 Gossypium hirsutum HOM05D003998 ORTHO05D005144 1.1e-19 101.7 130 41.5
Gohir.A10G130900 Gossypium hirsutum HOM05D003998 ORTHO05D005144 1.1e-19 101.7 130 41.5
Gohir.A13G128800 Gossypium hirsutum HOM05D003998 ORTHO05D005144 1.1e-19 101.7 130 41.5
Gohir.D02G024300 Gossypium hirsutum HOM05D003998 ORTHO05D005144 1.1e-19 101.7 130 41.5
Gohir.D11G007733 Gossypium hirsutum HOM05D003998 ORTHO05D005144 1.1e-19 101.7 130 41.5
Gorai.005G030200 Gossypium raimondii HOM05D003998 ORTHO05D005144 1.1e-19 101.7 130 41.5
Cc03_g08110 Coffea canephora HOM05D003998 ORTHO05D005144 1.5e-19 101.3 125 43.2
Migut.N00415 Erythranthe guttata HOM05D003998 ORTHO05D005144 2.0e-19 100.9 106 50.9
arahy.Tifrunner.gnm1.ann1.7DTN51 Arachis hypogaea HOM05D003998 ORTHO05D005144 2.6e-19 100.5 149 38.3
A05p13770 Brassica napus HOM05D003998 ORTHO05D005144 2.6e-19 100.5 175 42.3
BraA05t20313Z Brassica rapa HOM05D003998 ORTHO05D005144 2.6e-19 100.5 175 42.3
ECA232G0954 Erigeron canadensis HOM05D003998 ORTHO05D005144 2.6e-19 100.5 82 59.8
Ca_17974_v3 Cicer arietinum L. HOM05D003998 ORTHO05D005144 3.3e-19 100.1 154 37.0
Psat7g074560 Pisum sativum HOM05D003998 ORTHO05D005144 3.3e-19 100.1 153 36.6
Carub.0004s1305 Capsella rubella HOM05D003998 ORTHO05D005144 5.7e-19 99.4 156 39.7
SGA_v2.0_scaffold128G34122 Striga asiatica HOM05D003998 ORTHO05D005144 5.7e-19 99.4 109 46.8
Aa31LG5G5250 Aethionema arabicum HOM05D003998 ORTHO05D005144 7.5e-19 99.0 155 43.2
arahy.Tifrunner.gnm1.ann1.DT4C3Q Arachis hypogaea HOM05D003998 ORTHO05D005144 7.5e-19 99.0 149 36.9
BcaB02g10415 Brassica carinata HOM05D003998 ORTHO05D005144 7.5e-19 99.0 155 41.3
CANSAT78G0640 Cannabis sativa HOM05D003998 ORTHO05D005144 7.5e-19 99.0 108 46.3
TPR.G11885 Trifolium pratense HOM05D003998 ORTHO05D005144 1.3e-18 98.2 146 39.7
BcaC02g11284 Brassica carinata HOM05D003998 ORTHO05D005144 1.7e-18 97.8 155 41.3
Thhalv10016302m.g Eutrema salsugineum HOM05D003998 ORTHO05D005144 2.2e-18 97.4 165 41.2
Lalb_Chr12g0205551 Lupinus albus HOM05D003998 ORTHO05D005144 2.2e-18 97.4 118 41.5
AT2G31740 Arabidopsis thaliana HOM05D003998 ORTHO05D005144 2.8e-18 97.1 108 50.9
C04p18040 Brassica napus HOM05D003998 ORTHO05D005144 2.8e-18 97.1 155 44.5
BolC4t23351H Brassica oleracea HOM05D003998 ORTHO05D005144 2.8e-18 97.1 155 44.5
Medtr8g085220 Medicago truncatula HOM05D003998 ORTHO05D005144 2.8e-18 97.1 125 43.2
AL4G27000 Arabidopsis lyrata HOM05D003998 ORTHO05D005144 6.3e-18 95.9 108 50.0
CARHR125430 Cardamine hirsuta HOM05D003998 ORTHO05D005144 8.2e-18 95.5 98 53.1
unitig_22.g6826 Utricularia gibba HOM05D003998 ORTHO05D005144 8.2e-18 95.5 101 50.5
Sp4g14180 Schrenkiella parvula HOM05D003998 ORTHO05D005144 1.4e-17 94.7 144 38.9
Dinv38203 Davidia involucrata HOM05D003998 ORTHO05D005144 3.1e-17 93.6 131 40.5
Migut.I00433 Erythranthe guttata HOM05D003998 ORTHO05D005144 4.5e-16 89.7 131 41.2
CBR_g32089 Chara braunii HOM05D003998 ORTHO05D005144 5.9e-16 89.4 156 33.3
GSVIVG01020988001 Vitis vinifera HOM05D003998 ORTHO05D005144 7.7e-16 89.0 91 47.3
Migut.I00432 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.7e-15 87.8 129 39.5
Migut.F01776 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.9e-14 84.3 115 40.0
Oeu025025.1 Olea europaea HOM05D003998 ORTHO05D005144 5.5e-14 82.8 169 33.7
AUR62020839 Chenopodium quinoa HOM05D003998 ORTHO05D005144 9.4e-14 82.0 101 39.6
Migut.I00431 Erythranthe guttata HOM05D003998 ORTHO05D005144 9.4e-14 82.0 122 36.9
Migut.N00412 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.6e-13 81.3 123 39.8
Migut.N00410 Erythranthe guttata HOM05D003998 ORTHO05D005144 3.6e-13 80.1 158 34.8
Migut.I00213 Erythranthe guttata HOM05D003998 ORTHO05D005144 6.1e-13 79.3 120 35.8
FAN07G2317 Fragaria x ananassa HOM05D003998 ORTHO05D005144 2.3e-12 77.4 118 35.6
Migut.N00411 Erythranthe guttata HOM05D003998 ORTHO05D005144 5.2e-12 76.3 135 37.0
Migut.N00409 Erythranthe guttata HOM05D003998 ORTHO05D005144 8.8e-12 75.5 135 34.8
Migut.N00785 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.5e-11 74.7 127 37.0
Migut.N00414 Erythranthe guttata HOM05D003998 ORTHO05D005144 2.0e-11 74.3 151 35.8
Migut.F01720 Erythranthe guttata HOM05D003998 ORTHO05D005144 7.5e-11 72.4 117 35.9
SEGI_21756 Sequoiadendron giganteum HOM05D000104 ORTHO05D006311 7.5e-11 72.4 44 72.7
Migut.H01109 Erythranthe guttata HOM05D003998 ORTHO05D005144 2.2e-10 70.9 120 33.3
Migut.N00888 Erythranthe guttata HOM05D003998 ORTHO05D005144 3.7e-10 70.1 97 41.2
Migut.O00105 Erythranthe guttata HOM05D003998 ORTHO05D005144 6.3e-10 69.3 140 33.6
Migut.I00434 Erythranthe guttata HOM05D003998 ORTHO05D005144 5.4e-09 66.2 137 30.7
Pp3c19_2810 Physcomitrium patens HOM05D006575 ORTHO05D008251 1.6e-08 64.7 155 29.7
Mapoly0019s0002 Marchantia polymorpha HOM05D006575 ORTHO05D008251 2.0e-08 64.3 173 28.9
VMungo0251G3649 Vigna mungo HOM05D003998 ORTHO05D005144 2.0e-08 64.3 106 31.1
CBR_g12732 Chara braunii HOM05D003998 ORTHO05D008251 5.9e-08 62.8 86 34.9
SEGI_27526 Sequoiadendron giganteum HOM05D001775 ORTHO05D009111 5.9e-08 62.8 49 61.2
Migut.N00408 Erythranthe guttata HOM05D003998 ORTHO05D005144 7.7e-08 62.4 110 30.9
DCAR_019027 Daucus carota HOM05D006575 ORTHO05D008251 2.9e-07 60.5 112 30.4
PSO765G0131 Papaver somniferum HOM05D006575 ORTHO05D008251 3.8e-07 60.1 148 24.3
EL10Ac1g02057 Beta vulgaris HOM05D006575 ORTHO05D008251 6.5e-07 59.3 105 34.3
SGA_v2.0_scaffold8G04418 Striga asiatica HOM05D006575 ORTHO05D008251 6.5e-07 59.3 87 34.5
Dinv30658 Davidia involucrata HOM05D006575 ORTHO05D008251 8.5e-07 58.9 125 28.8
MSTRG.411 Avicennia marina HOM05D006575 ORTHO05D008251 1.5e-06 58.2 101 29.7
PSO349G0192 Papaver somniferum HOM05D006575 ORTHO05D008251 1.9e-06 57.8 111 26.1
Oeu030489.1 Olea europaea HOM05D006575 ORTHO05D008251 3.2e-06 57.0 86 34.9
GSVIVG01034712001 Vitis vinifera HOM05D006575 ORTHO05D008251 3.2e-06 57.0 82 31.7
Atru.chr12.966 Acer truncatum HOM05D006575 ORTHO05D008251 5.5e-06 56.2 108 31.5
ATR0820G127 Amborella trichopoda HOM05D006575 ORTHO05D008251 7.2e-06 55.8 105 32.4
Cc02_g10220 Coffea canephora HOM05D006575 ORTHO05D008251 7.2e-06 55.8 88 35.2
Atru.chr3.3435 Acer truncatum HOM05D000005 ORTHO05D000012 9.5e-06 55.5 61 45.9
Migut.C00311 Erythranthe guttata HOM05D003998 ORTHO05D005144 9.5e-06 55.5 172 25.0
Peaxi162Scf00244g00053 Petunia axillaris HOM05D006575 ORTHO05D008251 9.5e-06 55.5 82 31.7
Sed0005632 Sechium edule HOM05D006575 ORTHO05D008251 9.5e-06 55.5 120 25.8


User provided reference genes

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