Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17140 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 5.9e-42 173.7 84 100.0
SEGI_34573 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 5.9e-42 173.7 84 100.0
SEGI_40904 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 8.9e-38 159.8 83 90.4
Migut.C00533 Erythranthe guttata HOM05D005052 ORTHO05D006226 2.8e-31 138.3 83 77.1
arahy.Tifrunner.gnm1.ann1.1KVD1S Arachis hypogaea HOM05D005052 ORTHO05D006226 6.2e-31 137.1 83 75.9
arahy.Tifrunner.gnm1.ann1.PYN71E Arachis hypogaea HOM05D005052 ORTHO05D006226 6.2e-31 137.1 83 75.9
FvH4_1g11430 Fragaria vesca HOM05D005052 ORTHO05D006226 1.4e-30 136.0 83 74.7
FAN19G0738 Fragaria x ananassa HOM05D005052 ORTHO05D006226 1.4e-30 136.0 83 74.7
ClCG10G000590 Citrullus lanatus HOM05D005052 ORTHO05D006226 2.3e-30 135.2 83 74.7
Ciclev10025711m.g Citrus clementina HOM05D005052 ORTHO05D006226 2.3e-30 135.2 83 74.7
MELO3C013755.2 Cucumis melo HOM05D005052 ORTHO05D006226 2.3e-30 135.2 83 74.7
FAN26G3360 Fragaria x ananassa HOM05D005052 ORTHO05D006226 3.1e-30 134.8 83 74.7
FAN28G0876 Fragaria x ananassa HOM05D005052 ORTHO05D006226 3.1e-30 134.8 83 74.7
Oeu048477.1 Olea europaea HOM05D005052 ORTHO05D006226 3.1e-30 134.8 83 74.7
FAN23G2381 Fragaria x ananassa HOM05D005052 ORTHO05D006226 4.0e-30 134.4 83 74.7
MBI05_g23388_MAGBIO Magnolia biondii HOM05D005052 ORTHO05D006226 4.0e-30 134.4 83 74.7
Zm00001eb103800 Zea mays HOM05D005052 ORTHO05D006226 4.0e-30 134.4 83 74.7
Actinidia22954 Actinidia chinensis HOM05D005052 ORTHO05D006226 6.8e-30 133.7 83 73.5
vmacro22193 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 6.8e-30 133.7 83 71.1
GSVIVG01018732001 Vitis vinifera HOM05D005052 ORTHO05D006226 6.8e-30 133.7 83 73.5
Sabra05G0090900 Salix brachista HOM05D005052 ORTHO05D006226 8.9e-30 133.3 83 74.7
Sed0003793 Sechium edule HOM05D005052 ORTHO05D006226 8.9e-30 133.3 83 73.5
CsaV3_3G000670 Cucumis sativus L. HOM05D005052 ORTHO05D006226 1.2e-29 132.9 83 73.5
Potri.005G110900 Populus trichocarpa HOM05D005052 ORTHO05D006226 1.2e-29 132.9 83 73.5
Cpa.g.sc6.286 Carica papaya HOM05D005052 ORTHO05D006226 1.5e-29 132.5 83 72.3
Nn5g28565 Nelumbo nucifera HOM05D005052 ORTHO05D006226 1.5e-29 132.5 83 72.3
ATR0712G043 Amborella trichopoda HOM05D005052 ORTHO05D006226 2.0e-29 132.1 83 72.3
Dinv40116 Davidia involucrata HOM05D005052 ORTHO05D006226 2.0e-29 132.1 83 72.3
Lalb_Chr05g0212261 Lupinus albus HOM05D005052 ORTHO05D006226 2.0e-29 132.1 83 72.3
SalBow3G4284 Salvia bowleyana HOM05D005052 ORTHO05D006226 2.6e-29 131.7 83 71.1
PGR102G0465 Punica granatum HOM05D005052 ORTHO05D006226 3.4e-29 131.3 83 72.3
CiPaw.07G061100 Carya illinoinensis HOM05D005052 ORTHO05D006226 4.4e-29 131.0 83 71.1
Eucgr.J02467 Eucalyptus grandis HOM05D005052 ORTHO05D006226 4.4e-29 131.0 83 72.3
HanXRQChr13g0424561 Helianthus annuus HOM05D005052 ORTHO05D006226 4.4e-29 131.0 83 71.1
TPR.G10542 Trifolium pratense HOM05D005052 ORTHO05D006226 4.4e-29 131.0 83 72.3
Cc07_g11060 Coffea canephora HOM05D005052 ORTHO05D006226 5.8e-29 130.6 83 72.3
Glyma.01G164300 Glycine max HOM05D005052 ORTHO05D006226 5.8e-29 130.6 83 72.3
Rhsim08G0032100 Rhododendron simsii HOM05D005052 ORTHO05D006226 5.8e-29 130.6 83 71.1
VMungo1215G2918 Vigna mungo HOM05D005052 ORTHO05D006226 5.8e-29 130.6 83 72.3
CiPaw.08G130500 Carya illinoinensis HOM05D005052 ORTHO05D006226 7.5e-29 130.2 83 72.3
Glyma.11G078700 Glycine max HOM05D005052 ORTHO05D006226 7.5e-29 130.2 83 72.3
RcHm_v2.0_Chr2g0099021 Rosa chinensis HOM05D005052 ORTHO05D006226 7.5e-29 130.2 83 72.3
TWI53G1960 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 7.5e-29 130.2 83 72.3
Lj2g0011110 Lotus japonicus HOM05D005052 ORTHO05D006226 9.8e-29 129.8 83 72.3
Actinidia17421 Actinidia chinensis HOM05D005052 ORTHO05D006226 1.3e-28 129.4 83 69.9
ECA240G3065 Erigeron canadensis HOM05D005052 ORTHO05D006226 1.3e-28 129.4 83 71.1
MD15G1242600 Malus domestica HOM05D005052 ORTHO05D006226 1.3e-28 129.4 83 69.9
Medtr5g022580 Medicago truncatula HOM05D005052 ORTHO05D006226 1.3e-28 129.4 83 71.1
QL06p051082 Quercus lobata HOM05D005052 ORTHO05D006226 1.3e-28 129.4 83 71.1
TWI09G1579 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 1.3e-28 129.4 83 72.3
BcaC04g23113 Brassica carinata HOM05D005052 ORTHO05D006226 1.7e-28 129.0 83 72.3
C09p12030 Brassica napus HOM05D005052 ORTHO05D006226 1.7e-28 129.0 83 72.3
BolC9t54093H Brassica oleracea HOM05D005052 ORTHO05D006226 1.7e-28 129.0 83 72.3
CANSAT25G2560 Cannabis sativa HOM05D005052 ORTHO05D006226 1.7e-28 129.0 83 71.1
Hma1.2p1_2620F.1_g325580 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 1.7e-28 129.0 83 68.7
Nitab4.5_0001892g0080 Nicotiana tabacum HOM05D005052 ORTHO05D006226 1.7e-28 129.0 83 73.5
Aqoxy4G02022 Aquilegia oxysepala HOM05D005052 ORTHO05D006226 2.2e-28 128.6 83 69.9
Lj4A222T51 Lonicera japonica HOM05D005052 ORTHO05D006226 2.2e-28 128.6 83 71.1
Lalb_Chr09g0321611 Lupinus albus HOM05D005052 ORTHO05D006226 2.2e-28 128.6 83 69.9
vmacro18426 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 2.2e-28 128.6 83 71.1
Atru.chr3.855 Acer truncatum HOM05D005052 ORTHO05D006226 2.9e-28 128.3 83 71.1
MSTRG.2728 Avicennia marina HOM05D005052 ORTHO05D006226 2.9e-28 128.3 83 69.9
Ca_24920_v3 Cicer arietinum L. HOM05D005052 ORTHO05D006226 2.9e-28 128.3 83 69.9
Dinv33661 Davidia involucrata HOM05D005052 ORTHO05D006226 2.9e-28 128.3 83 69.9
Nitab4.5_0008943g0020 Nicotiana tabacum HOM05D005052 ORTHO05D006226 2.9e-28 128.3 83 73.5
Peaxi162Scf00328g00523 Petunia axillaris HOM05D005052 ORTHO05D006226 2.9e-28 128.3 83 72.3
SGA_v2.0_scaffold94G28549 Striga asiatica HOM05D005052 ORTHO05D006226 2.9e-28 128.3 83 69.9
Aa31LG1G14600 Aethionema arabicum HOM05D005052 ORTHO05D006226 3.7e-28 127.9 83 72.3
Thhalv10004219m.g Eutrema salsugineum HOM05D005052 ORTHO05D006226 3.7e-28 127.9 83 72.3
Sopen02g028370 Solanum pennellii HOM05D005052 ORTHO05D006226 3.7e-28 127.9 83 72.3
CAN.G1274.31 Capsicum annuum HOM05D005052 ORTHO05D006226 4.9e-28 127.5 83 72.3
CARHR281630 Cardamine hirsuta HOM05D005052 ORTHO05D006226 4.9e-28 127.5 83 71.1
BcaB04g20124 Brassica carinata HOM05D005052 ORTHO05D006226 6.4e-28 127.1 83 71.1
A09p10150 Brassica napus HOM05D005052 ORTHO05D006226 6.4e-28 127.1 83 71.1
BraA09t36659Z Brassica rapa HOM05D005052 ORTHO05D006226 6.4e-28 127.1 83 71.1
DCAR_022909 Daucus carota HOM05D005052 ORTHO05D006226 6.4e-28 127.1 83 69.9
Gohir.D12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 6.4e-28 127.1 83 69.9
Gorai.008G062200 Gossypium raimondii HOM05D005052 ORTHO05D006226 6.4e-28 127.1 83 69.9
Phvul.002G106700 Phaseolus vulgaris HOM05D005052 ORTHO05D006226 6.4e-28 127.1 83 69.9
Psat2g153160 Pisum sativum HOM05D005052 ORTHO05D006226 8.3e-28 126.7 83 69.9
AL8G45470 Arabidopsis lyrata HOM05D005052 ORTHO05D006226 1.1e-27 126.3 83 69.9
Carub.0008s2837 Capsella rubella HOM05D005052 ORTHO05D006226 1.1e-27 126.3 83 69.9
Gohir.A12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 1.1e-27 126.3 83 68.7
Solyc02g083590.3 Solanum lycopersicum HOM05D005052 ORTHO05D006226 1.1e-27 126.3 83 72.3
Haze_03731 Corylus avellana HOM05D005052 ORTHO05D006226 1.4e-27 125.9 83 69.9
Pp3c13_24150 Physcomitrium patens HOM05D005052 ORTHO05D006226 1.4e-27 125.9 83 71.1
Sp2g30570 Schrenkiella parvula HOM05D005052 ORTHO05D006226 1.4e-27 125.9 83 71.1
Os09g0539100 Oryza sativa ssp. japonica HOM05D005052 ORTHO05D006226 1.9e-27 125.6 83 68.7
AT5G66120 Arabidopsis thaliana HOM05D005052 ORTHO05D006226 2.4e-27 125.2 83 69.9
COL.COLO4_22462 Corchorus olitorius HOM05D005052 ORTHO05D006226 2.4e-27 125.2 83 69.9
CDE04G1415 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 3.2e-27 124.8 83 68.7
Duzib147G0491 Durio zibethinus HOM05D005052 ORTHO05D006226 3.2e-27 124.8 83 68.7
Hma1.2p1_0315F.1_g122330 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 3.2e-27 124.8 83 68.7
PSO541G6199 Papaver somniferum HOM05D005052 ORTHO05D006226 4.1e-27 124.4 83 68.7
Thecc.01G014600 Theobroma cacao HOM05D005052 ORTHO05D006226 4.1e-27 124.4 83 71.1
CSS0012363 Camellia sinensis var. sinensis HOM05D005052 ORTHO05D006226 7.0e-27 123.6 79 72.2
Prupe.7G171600 Prunus persica HOM05D005052 ORTHO05D006226 7.0e-27 123.6 83 67.5
PGSC0003DMG400003582 Solanum tuberosum HOM05D005052 ORTHO05D006226 7.0e-27 123.6 83 71.1
HPP92_025909 Vanilla planifolia HOM05D005052 ORTHO05D006226 7.0e-27 123.6 83 69.9
Actinidia28717 Actinidia chinensis HOM05D005052 ORTHO05D006226 9.2e-27 123.2 83 65.1
THA.LOC104821339 Tarenaya hassleriana HOM05D005052 ORTHO05D006226 9.2e-27 123.2 83 67.5
AUR62003338 Chenopodium quinoa HOM05D005052 ORTHO05D006226 1.6e-26 122.5 83 67.5
AUR62029500 Chenopodium quinoa HOM05D005052 ORTHO05D006226 2.0e-26 122.1 83 67.5
Nn1g06262 Nelumbo nucifera HOM05D005052 ORTHO05D006226 2.0e-26 122.1 83 67.5
Cfa007001 Carpinus fangiana HOM05D005052 ORTHO05D006226 2.7e-26 121.7 83 67.5
Gohir.D11G180500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 2.7e-26 121.7 83 67.5
HPP92_025914 Vanilla planifolia HOM05D005052 ORTHO05D006226 2.7e-26 121.7 83 68.7
Hund16503 Selenicereus undatus HOM05D005052 ORTHO05D006226 3.5e-26 121.3 83 67.5
unitig_699.g19702 Utricularia gibba HOM05D005052 ORTHO05D006226 4.6e-26 120.9 83 67.5
PSO675G6089 Papaver somniferum HOM05D005052 ORTHO05D006226 6.0e-26 120.6 83 66.3
Sc03g0003700 Simmondsia chinensis HOM05D005052 ORTHO05D006226 1.7e-25 119.0 83 66.3
Gorai.007G192400 Gossypium raimondii HOM05D005052 ORTHO05D006226 2.3e-25 118.6 83 67.5
SMO228G0049 Selaginella moellendorffii HOM05D005052 ORTHO05D006226 6.6e-25 117.1 83 66.3
CBR_g10969 Chara braunii HOM05D005052 ORTHO05D006226 1.5e-24 115.9 83 66.3
TAR381G1626 Trochodendron aralioides HOM05D005052 ORTHO05D006226 2.5e-24 115.2 84 65.5
Mapoly0031s0094 Marchantia polymorpha HOM05D005052 ORTHO05D006226 1.8e-22 109.0 83 62.7
AagrBONN_evm.TU.Sc2ySwM_340.387 Anthoceros agrestis HOM05D005052 ORTHO05D006226 9.9e-21 103.2 83 57.8
TPR.G6592 Trifolium pratense HOM05D005052 ORTHO05D006226 4.9e-20 100.9 59 74.6
Cre08.g368950 Chlamydomonas reinhardtii HOM05D005052 ORTHO05D006226 1.1e-19 99.8 83 55.4
Gohir.A11G173500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 1.9e-19 99.0 69 66.7
DCAR_004732 Daucus carota HOM05D005052 ORTHO05D006226 2.1e-18 95.5 69 62.3
DCAR_004721 Daucus carota HOM05D005052 ORTHO05D006226 1.1e-16 89.7 105 45.7
MCO01G625 Micromonas commoda HOM05D005052 ORTHO05D006226 3.1e-14 81.6 80 47.5
SEGI_22853 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 4.4e-13 77.8 43 83.7
Ah.03g149140 Amaranthus hybridus HOM05D000441 ORTHO05D000340 1.7e-09 65.9 51 58.8
PRCOL_00000314 Prasinoderma coloniale HOM05D005052 ORTHO05D006226 5.1e-09 64.3 84 41.7
Zm00001eb331970 Zea mays HOM05D005052 ORTHO05D006226 1.9e-08 62.4 51 56.9
SGA_v2.0_scaffold273G46395 Striga asiatica HOM05D005052 ORTHO05D006226 4.7e-07 57.8 28 92.9
MD02G1126200 Malus domestica HOM05D005052 ORTHO05D006226 8.1e-07 57.0 52 50.0
MD14G1099300 Malus domestica HOM05D005052 ORTHO05D006226 8.1e-07 57.0 52 50.0
CDE02G1558 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 6.9e-06 53.9 60 45.0


User provided reference genes

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