Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 0.0e+00 1152.1 640 100.0
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 1.7e-51 208.4 549 33.5
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 2.5e-47 194.5 854 28.0
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 3.6e-46 190.7 861 27.9
TAR381G1607 Trochodendron aralioides HOM05D007213 ORTHO05D009165 1.1e-42 179.1 234 51.7
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 5.2e-37 160.2 872 27.5
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.6e-36 157.9 558 28.9
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 2.2e-35 154.8 404 35.9
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 2.2e-35 154.8 801 28.5
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 4.8e-35 153.7 863 26.8
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 1.8e-34 151.8 857 26.4
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 2.0e-33 148.3 863 26.2
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 2.0e-33 148.3 875 26.7
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 2.0e-33 148.3 705 30.8
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 1.3e-32 145.6 323 38.1
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 2.9e-32 144.4 313 37.7
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 3.8e-32 144.1 858 26.2
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 3.8e-32 144.1 803 27.1
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 6.5e-32 143.3 812 27.7
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 1.5e-31 142.1 471 30.6
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 1.5e-31 142.1 570 28.8
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 1.9e-31 141.7 752 28.5
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 2.5e-31 141.4 854 26.1
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 5.5e-31 140.2 412 33.3
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 1.2e-30 139.0 567 28.4
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 1.2e-30 139.0 356 35.1
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 2.1e-30 138.3 378 34.1
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 8.0e-30 136.3 872 25.1
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 2.3e-29 134.8 851 24.9
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 6.8e-29 133.3 800 27.6
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 6.8e-29 133.3 341 38.1
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 6.8e-29 133.3 491 31.6
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 8.8e-29 132.9 855 25.4
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 1.5e-28 132.1 526 27.2
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 1.3e-27 129.0 289 38.4
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 1.1e-26 125.9 529 27.4
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 4.1e-26 124.0 534 27.3
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 7.0e-26 123.2 841 25.2
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 1.2e-25 122.5 177 46.9
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 4.5e-25 120.6 725 28.1
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 4.5e-25 120.6 286 34.6
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 5.9e-25 120.2 840 25.5
TAR381G0309 Trochodendron aralioides HOM05D007213 ORTHO05D009165 7.7e-25 119.8 561 30.1
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.7e-24 118.6 557 27.3
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 3.8e-24 117.5 728 27.6
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 3.8e-24 117.5 696 29.6
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 6.6e-24 116.7 727 27.6
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 8.6e-24 116.3 327 33.9
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 1.1e-23 115.9 707 27.6
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 1.9e-23 115.2 547 26.5
Hma1.2p1_0810F.1_g221910 Hydrangea macrophylla HOM05D007213 ORTHO05D009165 7.3e-23 113.2 177 44.1
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 1.2e-22 112.5 871 24.8
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 1.2e-22 112.5 762 26.4
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 1.2e-22 112.5 762 26.4
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 1.6e-22 112.1 868 24.1
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 1.0e-21 109.4 347 32.9
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 1.4e-21 109.0 883 24.8
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 5.2e-21 107.1 358 32.4
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 1.2e-20 105.9 315 33.3
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 1.5e-20 105.5 758 25.7
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 2.6e-20 104.8 332 33.4
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 2.6e-20 104.8 747 27.6
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 4.4e-20 104.0 868 23.5
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 9.8e-20 102.8 327 33.6
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 1.7e-19 102.1 765 25.5
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 4.9e-19 100.5 759 26.7
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 6.4e-19 100.1 740 26.2
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 6.4e-19 100.1 389 30.8
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.4e-18 99.0 881 24.3
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 1.4e-18 99.0 555 27.4
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 3.2e-18 97.8 315 32.7
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 4.1e-18 97.4 586 25.4
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 4.1e-18 97.4 586 25.4
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 7.0e-18 96.7 574 26.0
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 7.0e-18 96.7 230 33.9
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 1.2e-17 95.9 412 31.3
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 1.6e-17 95.5 281 35.2
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 5.9e-17 93.6 176 43.2
HPP92_026843 Vanilla planifolia HOM05D007213 ORTHO05D009165 3.0e-16 91.3 443 28.7
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 1.1e-15 89.4 825 23.5
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 3.3e-15 87.8 750 25.7
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 3.3e-15 87.8 808 24.4
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 5.6e-15 87.0 724 25.7
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 7.3e-15 86.7 452 29.0
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 2.1e-14 85.1 604 24.5
SEGI_32576 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 4.7e-14 84.0 120 49.2
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 6.2e-14 83.6 718 25.3
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 2.0e-12 78.6 132 40.9
Actinidia08359 Actinidia chinensis HOM05D007213 ORTHO05D009165 7.5e-12 76.6 403 29.3
Actinidia37289 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.3e-11 75.9 172 38.4
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 1.7e-11 75.5 104 45.2
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 3.7e-11 74.3 780 24.4
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 1.4e-10 72.4 854 23.0
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 1.9e-10 72.0 167 37.7
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 1.9e-10 72.0 233 32.2
ATR0605G187 Amborella trichopoda HOM05D007213 ORTHO05D009165 6.0e-09 67.0 366 30.6
Dinv19952 Davidia involucrata HOM05D007213 ORTHO05D009165 8.6e-08 63.2 64 54.7
Oeu000728.1 Olea europaea HOM05D007213 ORTHO05D009165 8.6e-08 63.2 123 43.1
Actinidia37290 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.5e-07 62.4 92 44.6
Lsat_1_v5_gn_4_123560 Lactuca sativa HOM05D007213 ORTHO05D009165 4.3e-07 60.8 72 51.4


User provided reference genes

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