Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34522 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.5e-40 169.1 84 100.0
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 4.4e-29 131.0 84 72.6
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 7.5e-29 130.2 84 72.6
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 7.5e-29 130.2 84 72.6
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 1.3e-28 129.4 84 73.8
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 1.3e-28 129.4 84 72.6
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 1.7e-28 129.0 84 75.0
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 2.2e-28 128.6 84 72.6
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 2.2e-28 128.6 84 71.4
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 2.2e-28 128.6 84 72.6
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 2.9e-28 128.3 84 72.6
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 2.9e-28 128.3 84 72.6
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 3.7e-28 127.9 84 71.4
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 4.9e-28 127.5 84 72.6
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 4.9e-28 127.5 84 71.4
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 4.9e-28 127.5 84 72.6
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 4.9e-28 127.5 84 70.2
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 4.9e-28 127.5 84 71.4
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 6.4e-28 127.1 84 72.6
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 6.4e-28 127.1 84 71.4
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 8.3e-28 126.7 84 70.2
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 8.3e-28 126.7 84 71.4
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 8.3e-28 126.7 84 70.2
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 1.1e-27 126.3 84 71.4
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 1.1e-27 126.3 84 71.4
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 1.1e-27 126.3 84 67.9
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 1.1e-27 126.3 84 71.4
GSVIVG01023147001 Vitis vinifera HOM05D006009 ORTHO05D007389 1.1e-27 126.3 82 72.0
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 1.4e-27 125.9 84 71.4
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 1.4e-27 125.9 84 72.6
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 1.4e-27 125.9 84 70.2
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 1.9e-27 125.6 84 71.4
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 1.9e-27 125.6 84 71.4
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 2.4e-27 125.2 84 71.4
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 2.4e-27 125.2 84 70.2
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 2.4e-27 125.2 84 71.4
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 3.2e-27 124.8 84 67.9
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 3.2e-27 124.8 83 71.1
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 4.1e-27 124.4 84 70.2
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 5.4e-27 124.0 84 70.2
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 5.4e-27 124.0 84 70.2
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 5.4e-27 124.0 84 71.4
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 7.0e-27 123.6 84 66.7
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 7.0e-27 123.6 82 69.5
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 7.0e-27 123.6 82 69.5
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 7.0e-27 123.6 84 66.7
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 9.2e-27 123.2 84 71.4
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 9.2e-27 123.2 84 66.7
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 9.2e-27 123.2 84 70.2
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 9.2e-27 123.2 84 69.0
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 1.2e-26 122.9 84 67.9
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 1.6e-26 122.5 82 68.3
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 1.6e-26 122.5 82 68.3
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 1.6e-26 122.5 82 68.3
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 1.6e-26 122.5 84 70.2
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 2.0e-26 122.1 82 68.3
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 2.0e-26 122.1 82 68.3
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 2.0e-26 122.1 84 69.0
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 2.7e-26 121.7 84 69.0
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 3.5e-26 121.3 84 66.7
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 4.6e-26 120.9 83 67.5
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 4.6e-26 120.9 82 68.3
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 4.6e-26 120.9 84 67.9
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 6.0e-26 120.6 82 68.3
Oeu028479.1 Olea europaea HOM05D006009 ORTHO05D007389 6.0e-26 120.6 84 69.0
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 7.8e-26 120.2 84 67.9
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 7.8e-26 120.2 84 67.9
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 1.0e-25 119.8 82 67.1
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 1.0e-25 119.8 82 67.1
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 1.0e-25 119.8 82 67.1
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 1.0e-25 119.8 84 70.2
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 1.0e-25 119.8 84 70.2
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 1.0e-25 119.8 84 69.0
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 1.3e-25 119.4 84 66.7
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 1.7e-25 119.0 84 66.7
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 1.7e-25 119.0 84 66.7
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 2.3e-25 118.6 84 66.7
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 3.0e-25 118.2 84 65.5
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 3.9e-25 117.9 84 64.3
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 8.6e-25 116.7 82 64.6
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 1.1e-24 116.3 84 65.5
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 1.5e-24 115.9 83 68.7
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 7.3e-24 113.6 84 65.5
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 1.1e-22 109.8 82 59.8
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 1.8e-22 109.0 84 60.7
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 2.6e-21 105.1 73 65.8
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 9.2e-19 96.7 84 59.5
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 3.5e-18 94.7 83 55.4
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 4.6e-18 94.4 84 59.5
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 1.9e-16 89.0 55 76.4
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 1.9e-16 89.0 57 71.9
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 3.6e-15 84.7 54 74.1
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 6.2e-15 84.0 54 72.2
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 5.2e-14 80.9 55 69.1
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 5.2e-14 80.9 65 60.0
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 1.7e-12 75.9 54 63.0
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 9.2e-11 70.1 77 46.8
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 6.0e-10 67.4 75 42.7
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 5.1e-09 64.3 42 69.0
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 1.1e-08 63.2 57 50.9
SMO343G0089 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 1.5e-08 62.8 86 40.7
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 7.3e-08 60.5 54 42.6
MCO13G251 Micromonas commoda HOM05D006009 ORTHO05D007389 8.1e-07 57.0 89 34.8


User provided reference genes

Program Settings