Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34470 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 1.3e-251 872.8 518 100.0
MBI17_g03751_MAGBIO Magnolia biondii HOM05D003782 ORTHO05D004361 1.6e-73 281.2 251 63.7
Aqoxy6G00197 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 1.7e-70 271.2 262 58.0
Manes.17G043000 Manihot esculenta HOM05D003782 ORTHO05D004361 2.2e-70 270.8 251 62.2
CDE02G2556 Ceratophyllum demersum HOM05D003782 ORTHO05D004361 2.9e-70 270.4 245 64.1
Sabra11G0033700 Salix brachista HOM05D003782 ORTHO05D004361 2.9e-70 270.4 251 61.8
Aqoxy4G01073 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 4.9e-70 269.6 262 58.0
CiPaw.09G056900 Carya illinoinensis HOM05D003782 ORTHO05D004361 8.4e-70 268.9 259 60.6
Potri.011G049300 Populus trichocarpa HOM05D003782 ORTHO05D004361 8.4e-70 268.9 251 59.8
Manes.16G025200 Manihot esculenta HOM05D003782 ORTHO05D004361 1.1e-69 268.5 255 62.4
Cfa000411 Carpinus fangiana HOM05D003782 ORTHO05D004361 2.4e-69 267.3 261 59.8
CiPaw.10G046700 Carya illinoinensis HOM05D003782 ORTHO05D004361 7.1e-69 265.8 261 59.8
Potri.004G039900 Populus trichocarpa HOM05D003782 ORTHO05D004361 2.7e-68 263.8 253 58.5
ATR0680G033 Amborella trichopoda HOM05D003782 ORTHO05D004361 4.6e-68 263.1 246 60.6
TAR624G0538 Trochodendron aralioides HOM05D003782 ORTHO05D003724 6.0e-68 262.7 276 57.6
QL05p039400 Quercus lobata HOM05D003782 ORTHO05D004361 1.3e-67 261.5 253 60.5
GSVIVG01006449001 Vitis vinifera HOM05D003782 ORTHO05D004361 1.3e-67 261.5 263 57.4
Haze_06504 Corylus avellana HOM05D003782 ORTHO05D004361 1.7e-67 261.2 254 59.1
PSO832G0898 Papaver somniferum HOM05D003782 ORTHO05D004361 6.6e-67 259.2 248 58.1
PSO210G1870 Papaver somniferum HOM05D003782 ORTHO05D004361 1.1e-66 258.5 248 57.7
vmacro03847 Vaccinium macrocarpon HOM05D003782 ORTHO05D004361 1.9e-66 257.7 250 61.2
CANSAT35G1194 Cannabis sativa HOM05D003782 ORTHO05D004361 4.3e-66 256.5 250 60.0
RhsimUnG0044200 Rhododendron simsii HOM05D003782 ORTHO05D004361 4.3e-66 256.5 250 60.0
TWI38G1173 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 4.3e-66 256.5 245 59.2
Eucgr.E03352 Eucalyptus grandis HOM05D003782 ORTHO05D004361 2.8e-65 253.8 264 56.4
Actinidia05612 Actinidia chinensis HOM05D003782 ORTHO05D004361 3.6e-65 253.4 251 59.0
FAN25G2149 Fragaria x ananassa HOM05D003782 ORTHO05D004361 6.2e-65 252.7 259 57.1
Prupe.4G043300 Prunus persica HOM05D003782 ORTHO05D004361 6.2e-65 252.7 256 57.8
FvH4_3g04800 Fragaria vesca HOM05D003782 ORTHO05D004361 8.1e-65 252.3 259 57.1
FAN16G0824 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.4e-64 251.5 259 56.8
Hma1.2p1_0881F.1_g231940 Hydrangea macrophylla HOM05D003782 ORTHO05D004361 1.4e-64 251.5 252 57.5
FAN11G2511 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.8e-64 251.1 259 56.8
FAN21G1192 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.8e-64 251.1 259 56.8
MSTRG.14684 Avicennia marina HOM05D003782 ORTHO05D004361 2.4e-64 250.8 259 54.8
HanXRQChr04g0124181 Helianthus annuus HOM05D003782 ORTHO05D004361 4.0e-64 250.0 251 57.0
CSS0005863 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 5.2e-64 249.6 251 59.0
Sc05g0007840 Simmondsia chinensis HOM05D003782 ORTHO05D004361 6.9e-64 249.2 250 58.4
RcHm_v2.0_Chr5g0007891 Rosa chinensis HOM05D003782 ORTHO05D004361 1.2e-63 248.4 259 55.6
Ciclev10014178m.g Citrus clementina HOM05D003782 ORTHO05D004361 1.5e-63 248.1 251 57.8
Cc02_g13030 Coffea canephora HOM05D003782 ORTHO05D004361 1.5e-63 248.1 269 55.4
Peaxi162Scf00379g00065 Petunia axillaris HOM05D003782 ORTHO05D004361 1.5e-63 248.1 252 57.1
CsaV3_1G012120 Cucumis sativus L. HOM05D003782 ORTHO05D004361 2.0e-63 247.7 251 57.8
Lalb_Chr05g0218361 Lupinus albus HOM05D003782 ORTHO05D004361 2.0e-63 247.7 252 56.7
MD10G1297100 Malus domestica HOM05D003782 ORTHO05D004361 4.4e-63 246.5 259 54.8
Zm00001eb220930 Zea mays HOM05D003782 ORTHO05D004361 9.9e-63 245.4 250 56.0
Nitab4.5_0011233g0010 Nicotiana tabacum HOM05D003782 ORTHO05D004361 2.9e-62 243.8 251 56.6
Thecc.06G191300 Theobroma cacao HOM05D003782 ORTHO05D004361 2.9e-62 243.8 256 55.9
DCAR_008048 Daucus carota HOM05D003782 ORTHO05D004361 3.8e-62 243.4 251 55.0
ClCG03G005890 Citrullus lanatus HOM05D003782 ORTHO05D004361 4.9e-62 243.0 252 56.7
Duzib192G0241 Durio zibethinus HOM05D003782 ORTHO05D004361 4.9e-62 243.0 256 56.6
Sopen02g023410 Solanum pennellii HOM05D003782 ORTHO05D004361 4.9e-62 243.0 251 57.0
Gohir.D06G130600 Gossypium hirsutum HOM05D003782 ORTHO05D004361 6.4e-62 242.7 254 56.7
Duzib160G0524 Durio zibethinus HOM05D003782 ORTHO05D004361 8.4e-62 242.3 259 56.4
Gohir.A06G125300 Gossypium hirsutum HOM05D003782 ORTHO05D004361 8.4e-62 242.3 254 56.3
HanXRQChr08g0209481 Helianthus annuus HOM05D003782 ORTHO05D004361 8.4e-62 242.3 245 57.6
CAN.G1627.12 Capsicum annuum HOM05D003782 ORTHO05D004361 2.4e-61 240.7 249 57.0
MD05G1316600 Malus domestica HOM05D003782 ORTHO05D004361 2.4e-61 240.7 261 55.2
Glyma.13G181800 Glycine max HOM05D003782 ORTHO05D004361 4.2e-61 240.0 251 57.0
HPP92_014533 Vanilla planifolia HOM05D003782 ORTHO05D004361 4.2e-61 240.0 249 53.4
MELO3C002586.2 Cucumis melo HOM05D003782 ORTHO05D004361 5.4e-61 239.6 247 57.1
Glyma.07G194500 Glycine max HOM05D003782 ORTHO05D004361 5.4e-61 239.6 251 56.6
Solyc02g078560.4 Solanum lycopersicum HOM05D003782 ORTHO05D004361 7.1e-61 239.2 251 55.8
Sed0005800 Sechium edule HOM05D003782 ORTHO05D004361 1.2e-60 238.4 261 51.0
Lj4g0027811 Lotus japonicus HOM05D003782 ORTHO05D004361 1.6e-60 238.0 249 57.4
Duzib235G1248 Durio zibethinus HOM05D003782 ORTHO05D004361 4.6e-60 236.5 251 55.8
Mapoly0014s0099 Marchantia polymorpha HOM05D003782 ORTHO05D004361 7.8e-60 235.7 259 52.5
Phvul.002G226800 Phaseolus vulgaris HOM05D003782 ORTHO05D004361 1.0e-59 235.3 251 56.2
SGA_v2.0_scaffold49G18282 Striga asiatica HOM05D003782 ORTHO05D004361 1.0e-59 235.3 260 51.2
Atru.chr10.1947 Acer truncatum HOM05D003782 ORTHO05D004361 3.0e-59 233.8 264 53.8
Lalb_Chr09g0327561 Lupinus albus HOM05D003782 ORTHO05D004361 3.9e-59 233.4 251 55.4
Sed0026382 Sechium edule HOM05D003782 ORTHO05D004361 6.6e-59 232.6 250 53.6
Lsat_1_v5_gn_7_19080 Lactuca sativa HOM05D003782 ORTHO05D004361 1.9e-58 231.1 249 53.4
Medtr4g089015 Medicago truncatula HOM05D003782 ORTHO05D004361 1.9e-58 231.1 249 56.2
EL10Ac8g20337 Beta vulgaris HOM05D003782 ORTHO05D004361 2.5e-58 230.7 252 54.0
Migut.H01508 Erythranthe guttata HOM05D003782 ORTHO05D004361 2.5e-58 230.7 251 55.0
AUR62016973 Chenopodium quinoa HOM05D003782 ORTHO05D004361 3.3e-58 230.3 261 53.6
AT1G11060 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 7.3e-58 229.2 251 53.4
arahy.Tifrunner.gnm1.ann1.1A97AW Arachis hypogaea HOM05D003782 ORTHO05D004361 7.3e-58 229.2 262 54.6
Os10g0497000 Oryza sativa ssp. japonica HOM05D003782 ORTHO05D004361 7.3e-58 229.2 252 53.6
TPR.G12054 Trifolium pratense HOM05D003782 ORTHO05D004361 7.3e-58 229.2 249 55.4
Psat7g113440 Pisum sativum HOM05D003782 ORTHO05D004361 9.6e-58 228.8 245 55.9
VMungo0251G3691 Vigna mungo HOM05D003782 ORTHO05D004361 9.6e-58 228.8 248 54.0
arahy.Tifrunner.gnm1.ann1.2GZF7Z Arachis hypogaea HOM05D003782 ORTHO05D004361 1.3e-57 228.4 261 53.6
Ca_18527_v3 Cicer arietinum L. HOM05D003782 ORTHO05D004361 1.3e-57 228.4 249 55.8
Dinv07533 Davidia involucrata HOM05D003782 ORTHO05D004361 1.3e-57 228.4 241 54.8
Ah.14g089260 Amaranthus hybridus HOM05D003782 ORTHO05D004361 1.6e-57 228.0 253 54.9
Lalb_Chr20g0122011 Lupinus albus HOM05D003782 ORTHO05D004361 1.6e-57 228.0 251 51.8
Carub.0001s1062 Capsella rubella HOM05D003782 ORTHO05D004361 2.1e-57 227.6 251 53.4
AL1G22040 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 2.8e-57 227.3 251 53.4
C05p09350 Brassica napus HOM05D003782 ORTHO05D004361 3.6e-57 226.9 251 53.0
Sp1g09750 Schrenkiella parvula HOM05D003782 ORTHO05D004361 3.6e-57 226.9 250 52.8
PGR042G3934 Punica granatum HOM05D003782 ORTHO05D004361 4.8e-57 226.5 259 52.9
Aa31LG1G3850 Aethionema arabicum HOM05D003782 ORTHO05D004361 6.2e-57 226.1 251 53.4
CARHR011250 Cardamine hirsuta HOM05D003782 ORTHO05D004361 6.2e-57 226.1 251 53.0
AUR62014785 Chenopodium quinoa HOM05D003782 ORTHO05D004361 6.2e-57 226.1 281 50.9
arahy.Tifrunner.gnm1.ann1.AS4EHM Arachis hypogaea HOM05D003782 ORTHO05D004361 1.1e-56 225.3 251 51.8
arahy.Tifrunner.gnm1.ann1.HPML60 Arachis hypogaea HOM05D003782 ORTHO05D004361 1.1e-56 225.3 251 51.8
Gohir.A06G209800 Gossypium hirsutum HOM05D003782 ORTHO05D004361 1.4e-56 224.9 240 57.1
BcaC05g24980 Brassica carinata HOM05D003782 ORTHO05D004361 1.8e-56 224.6 251 53.0
Thhalv10006765m.g Eutrema salsugineum HOM05D003782 ORTHO05D004361 3.1e-56 223.8 251 52.6
Lj6g0013812 Lotus japonicus HOM05D003782 ORTHO05D004361 3.1e-56 223.8 246 52.4
A06p07760 Brassica napus HOM05D003782 ORTHO05D004361 6.9e-56 222.6 251 52.6
CSS0007425 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 6.9e-56 222.6 240 55.8
Sp2g03490 Schrenkiella parvula HOM05D003782 ORTHO05D004361 6.9e-56 222.6 251 53.8
BraA06t23977Z Brassica rapa HOM05D003782 ORTHO05D004361 1.5e-55 221.5 251 52.6
BraA09t41812Z Brassica rapa HOM05D003782 ORTHO05D004361 1.5e-55 221.5 251 52.6
Gorai.010G255000 Gossypium raimondii HOM05D003782 ORTHO05D004361 3.4e-55 220.3 240 55.8
SalBow8G2382 Salvia bowleyana HOM05D003782 ORTHO05D004361 3.4e-55 220.3 251 52.2
C08p48360 Brassica napus HOM05D003782 ORTHO05D004361 5.8e-55 219.5 251 51.8
BolC8t52375H Brassica oleracea HOM05D003782 ORTHO05D004361 5.8e-55 219.5 251 51.8
Carub.0002s0417 Capsella rubella HOM05D003782 ORTHO05D004361 5.8e-55 219.5 251 51.8
Gohir.D06G211200 Gossypium hirsutum HOM05D003782 ORTHO05D004361 5.8e-55 219.5 240 55.8
SalBow7G0271 Salvia bowleyana HOM05D003782 ORTHO05D004361 1.7e-54 218.0 285 47.7
SalBow7G0940 Salvia bowleyana HOM05D003782 ORTHO05D004361 1.7e-54 218.0 285 47.7
COL.COLO4_31507 Corchorus olitorius HOM05D003782 ORTHO05D004361 2.9e-54 217.2 256 53.5
A09p64830 Brassica napus HOM05D003782 ORTHO05D004361 3.8e-54 216.9 251 51.8
AL2G15410 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 1.4e-53 214.9 246 51.2
Pp3c9_20340 Physcomitrium patens HOM05D003782 ORTHO05D004361 1.4e-53 214.9 244 51.6
Pp3c9_20349 Physcomitrium patens HOM05D003782 ORTHO05D004361 1.4e-53 214.9 244 51.6
SMO169G0190 Selaginella moellendorffii HOM05D003782 ORTHO05D004361 3.2e-53 213.8 248 50.4
Migut.M01185 Erythranthe guttata HOM05D003782 ORTHO05D004361 4.2e-53 213.4 263 46.8
BolC5t29675H Brassica oleracea HOM05D003782 ORTHO05D004361 1.2e-52 211.8 279 47.7
Aa31LG2G9560 Aethionema arabicum HOM05D003782 ORTHO05D004361 6.0e-52 209.5 265 48.7
AT1G61030 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 1.0e-51 208.8 246 49.6
Lj1C1208G1 Lonicera japonica HOM05D003782 ORTHO05D004361 5.1e-51 206.5 258 48.8
CARHR052160 Cardamine hirsuta HOM05D003782 ORTHO05D004361 6.7e-51 206.1 245 50.2
Lj6g0001672 Lotus japonicus HOM05D003782 ORTHO05D004361 3.3e-50 203.8 247 50.6
Zm00001eb044640 Zea mays HOM05D003782 ORTHO05D004361 1.6e-49 201.4 254 47.6
BcaC07g41789 Brassica carinata HOM05D003782 ORTHO05D004361 6.2e-49 199.5 276 46.7
Gorai.010G152400 Gossypium raimondii HOM05D003782 ORTHO05D004361 1.5e-47 194.9 257 49.0
Oeu014694.1 Olea europaea HOM05D003782 ORTHO05D004361 5.8e-47 193.0 262 46.9
ECA236G4595 Erigeron canadensis HOM05D003782 ORTHO05D004361 1.3e-46 191.8 210 52.4
Hund23698 Selenicereus undatus HOM05D003782 ORTHO05D004361 8.4e-46 189.1 276 46.4
Dinv40534 Davidia involucrata HOM05D003782 ORTHO05D004361 5.5e-45 186.4 213 54.0
Nitab4.5_0003668g0120 Nicotiana tabacum HOM05D003782 ORTHO05D004361 1.8e-43 181.4 261 43.3
Ah.09g235740 Amaranthus hybridus HOM05D003782 ORTHO05D004361 5.3e-40 169.9 260 41.9
Oeu043706.1 Olea europaea HOM05D003782 ORTHO05D004361 1.7e-38 164.9 290 42.8
CBR_g19729 Chara braunii HOM05D003782 ORTHO05D004361 3.5e-36 157.1 270 42.2
unitig_26.g9369 Utricularia gibba HOM05D003782 ORTHO05D004361 4.3e-34 150.2 201 51.7
Sabra04G0024500 Salix brachista HOM05D003782 ORTHO05D004361 9.7e-34 149.1 139 61.2
CSS0036804 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 1.2e-23 115.5 113 54.0
TWI12G0412 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 8.5e-22 109.4 209 42.6
Cpa.g.sc27.75 Carica papaya HOM05D003782 ORTHO05D004361 4.2e-21 107.1 147 49.7
Sabra04G0024600 Salix brachista HOM05D003782 ORTHO05D004361 5.1e-19 100.1 141 43.3
arahy.Tifrunner.gnm1.ann1.M5G8HU Arachis hypogaea HOM05D003782 ORTHO05D004361 1.1e-18 99.0 83 62.7
TWI12G0828 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 3.7e-17 94.0 189 39.2
arahy.Tifrunner.gnm1.ann1.S76ADD Arachis hypogaea HOM05D001687 ORTHO05D001608 1.1e-16 92.4 97 53.6
arahy.Tifrunner.gnm1.ann1.IMK82Y Arachis hypogaea HOM05D003782 ORTHO05D004361 3.8e-14 84.0 68 64.7
CSS0006007 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 1.6e-12 78.6 59 71.2
MCO02G174 Micromonas commoda HOM05D003782 ORTHO05D004361 1.8e-11 75.1 307 26.1
Nn1g04009 Nelumbo nucifera HOM05D003782 ORTHO05D004361 3.7e-09 67.4 79 50.6


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