Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34450 Sequoiadendron giganteum HOM05D037356 ORTHO05D010231 1.7e-26 122.1 70 100.0
SEGI_27788 Sequoiadendron giganteum HOM05D037356 ORTHO05D010231 4.2e-25 117.5 70 97.1
SEGI_19797 Sequoiadendron giganteum HOM05D037356 ORTHO05D010231 2.2e-21 105.1 70 87.1
Sc13g0001370 Simmondsia chinensis HOM05D008152 ORTHO05D010231 1.6e-08 62.4 27 88.9
Hund19113 Selenicereus undatus HOM05D008152 ORTHO05D010231 2.7e-08 61.6 67 40.3
Glyma.03G128700 Glycine max HOM05D008152 ORTHO05D010231 5.2e-07 57.4 27 77.8
Lalb_Chr14g0365951 Lupinus albus HOM05D008152 ORTHO05D010231 5.2e-07 57.4 27 77.8
Medtr7g090035 Medicago truncatula HOM05D008152 ORTHO05D010231 5.2e-07 57.4 29 69.0
PGR031G3912 Punica granatum HOM05D008152 ORTHO05D010231 8.8e-07 56.6 30 70.0
Glyma.19G131100 Glycine max HOM05D008152 ORTHO05D010231 1.2e-06 56.2 26 80.8
Psat3g078320 Pisum sativum HOM05D008152 ORTHO05D010231 1.5e-06 55.8 27 74.1
BcaC06g32113 Brassica carinata HOM05D008152 ORTHO05D010231 2.0e-06 55.5 51 43.1
A10p32040 Brassica napus HOM05D008152 ORTHO05D010231 3.3e-06 54.7 63 36.5
Potri.006G043300 Populus trichocarpa HOM05D008152 ORTHO05D010231 3.3e-06 54.7 28 67.9
Prupe.7G046400 Prunus persica HOM05D008152 ORTHO05D010231 3.3e-06 54.7 27 70.4
RcHm_v2.0_Chr2g0124931 Rosa chinensis HOM05D008152 ORTHO05D010231 3.3e-06 54.7 27 70.4
CSS0018961 Camellia sinensis var. sinensis HOM05D008152 ORTHO05D010231 4.4e-06 54.3 26 76.9
FvH4_6g25100 Fragaria vesca HOM05D008152 ORTHO05D010231 4.4e-06 54.3 27 70.4
FAN05G4131 Fragaria x ananassa HOM05D008152 ORTHO05D010231 4.4e-06 54.3 27 70.4
FAN09G1661 Fragaria x ananassa HOM05D008152 ORTHO05D010231 4.4e-06 54.3 27 70.4
MD00G1073900 Malus domestica HOM05D008152 ORTHO05D010231 5.7e-06 53.9 26 73.1
MD12G1091200 Malus domestica HOM05D008152 ORTHO05D010231 5.7e-06 53.9 26 73.1
BcaB01g05765 Brassica carinata HOM05D008152 ORTHO05D010231 7.5e-06 53.5 28 67.9
A03p01520 Brassica napus HOM05D008152 ORTHO05D010231 7.5e-06 53.5 28 67.9
C03p01870 Brassica napus HOM05D008152 ORTHO05D010231 7.5e-06 53.5 28 67.9
BraA02t04797Z Brassica rapa HOM05D008152 ORTHO05D010231 7.5e-06 53.5 63 36.5
BraA03t09529Z Brassica rapa HOM05D008152 ORTHO05D010231 7.5e-06 53.5 28 67.9
C09p72760 Brassica napus HOM05D008152 ORTHO05D010231 9.7e-06 53.1 51 41.2
BolC2t06131H Brassica oleracea HOM05D008152 ORTHO05D010231 9.7e-06 53.1 27 66.7
BolC9t60014H Brassica oleracea HOM05D008152 ORTHO05D010231 9.7e-06 53.1 63 36.5
BraA10t45248Z Brassica rapa HOM05D008152 ORTHO05D010231 9.7e-06 53.1 51 41.2
Solyc10g084060.2 Solanum lycopersicum HOM05D008152 ORTHO05D010231 9.7e-06 53.1 27 74.1


User provided reference genes

Program Settings