Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34411 Sequoiadendron giganteum HOM05D007142 ORTHO05D008983 3.4e-166 588.2 282 100.0
CANSAT21G2079 Cannabis sativa HOM05D007142 ORTHO05D008983 2.4e-79 299.7 190 75.8
PSO384G0274 Papaver somniferum HOM05D007142 ORTHO05D008983 4.1e-79 298.9 205 68.8
THA.LOC104807961 Tarenaya hassleriana HOM05D007142 ORTHO05D008983 1.3e-77 293.9 212 65.6
arahy.Tifrunner.gnm1.ann1.J3YA34 Arachis hypogaea HOM05D007142 ORTHO05D008983 1.7e-77 293.5 195 70.8
PSO339G0102 Papaver somniferum HOM05D007142 ORTHO05D008983 1.7e-77 293.5 204 68.1
SGA_v2.0_scaffold4519G54498 Striga asiatica HOM05D007142 ORTHO05D008983 2.3e-77 293.1 194 70.6
FAN18G0559 Fragaria x ananassa HOM05D007142 ORTHO05D008983 2.5e-76 289.7 198 68.7
COL.COLO4_17070 Corchorus olitorius HOM05D007142 ORTHO05D008983 3.3e-76 289.3 197 68.5
RcHm_v2.0_Chr7g0209181 Rosa chinensis HOM05D007142 ORTHO05D008983 3.3e-76 289.3 191 70.7
Aqoxy3G02453 Aquilegia oxysepala HOM05D007142 ORTHO05D008983 5.6e-76 288.5 197 69.5
BcaB07g32947 Brassica carinata HOM05D007142 ORTHO05D008983 5.6e-76 288.5 211 66.4
CARHR031970 Cardamine hirsuta HOM05D007142 ORTHO05D008983 7.2e-76 288.1 212 67.0
MD06G1031800 Malus domestica HOM05D007142 ORTHO05D008983 7.2e-76 288.1 199 69.3
FAN08G2513 Fragaria x ananassa HOM05D007142 ORTHO05D008983 9.5e-76 287.7 198 68.2
MSTRG.9125 Avicennia marina HOM05D007142 ORTHO05D008983 2.8e-75 286.2 189 70.4
Dinv28934 Davidia involucrata HOM05D007142 ORTHO05D008983 2.8e-75 286.2 198 69.2
FvH4_5g21680 Fragaria vesca HOM05D007142 ORTHO05D008983 2.8e-75 286.2 198 68.2
TAR629G1364 Trochodendron aralioides HOM05D007142 ORTHO05D008983 3.6e-75 285.8 198 68.7
GSVIVG01013184001 Vitis vinifera HOM05D007142 ORTHO05D008983 3.6e-75 285.8 197 68.5
Actinidia25952 Actinidia chinensis HOM05D007142 ORTHO05D008983 4.7e-75 285.4 198 69.2
Duzib205G0350 Durio zibethinus HOM05D007142 ORTHO05D008983 4.7e-75 285.4 206 66.5
Migut.F01892 Erythranthe guttata HOM05D007142 ORTHO05D008983 8.0e-75 284.6 191 71.2
Solyc06g061090.3 Solanum lycopersicum HOM05D007142 ORTHO05D008983 1.0e-74 284.3 199 69.3
Sopen06g021290 Solanum pennellii HOM05D007142 ORTHO05D008983 1.0e-74 284.3 199 69.3
ECA246G1460 Erigeron canadensis HOM05D007142 ORTHO05D008983 1.4e-74 283.9 187 71.7
Thecc.03G230800 Theobroma cacao HOM05D007142 ORTHO05D008983 1.8e-74 283.5 190 70.0
Cpa.g.sc665.3 Carica papaya HOM05D007142 ORTHO05D008983 2.3e-74 283.1 196 68.9
CDE11G1210 Ceratophyllum demersum HOM05D007142 ORTHO05D008983 2.3e-74 283.1 189 70.4
SalBow4G2536 Salvia bowleyana HOM05D007142 ORTHO05D008983 2.3e-74 283.1 191 69.1
HPP92_004467 Vanilla planifolia HOM05D007142 ORTHO05D008983 2.3e-74 283.1 194 68.0
Ah.12g054590 Amaranthus hybridus HOM05D007142 ORTHO05D008983 4.0e-74 282.3 198 70.7
AT1G32520 Arabidopsis thaliana HOM05D007142 ORTHO05D008983 4.0e-74 282.3 192 70.3
Aa31LG2G13430 Aethionema arabicum HOM05D007142 ORTHO05D008983 6.8e-74 281.6 194 69.6
EL10Ac5g12171 Beta vulgaris HOM05D007142 ORTHO05D008983 6.8e-74 281.6 190 70.0
CAN.G201.17 Capsicum annuum HOM05D007142 ORTHO05D008983 6.8e-74 281.6 200 66.5
Lalb_Chr09g0329501 Lupinus albus HOM05D007142 ORTHO05D008983 8.9e-74 281.2 199 68.8
DCAR_032211 Daucus carota HOM05D007142 ORTHO05D008983 1.2e-73 280.8 190 68.4
Prupe.5G040300 Prunus persica HOM05D007142 ORTHO05D008983 1.2e-73 280.8 198 67.7
C05p31960 Brassica napus HOM05D007142 ORTHO05D008983 1.5e-73 280.4 195 69.2
BolC5t31922H Brassica oleracea HOM05D007142 ORTHO05D008983 1.5e-73 280.4 195 69.2
A09p33690 Brassica napus HOM05D007142 ORTHO05D008983 2.0e-73 280.0 195 69.2
AL1G46770 Arabidopsis lyrata HOM05D007142 ORTHO05D008983 2.6e-73 279.6 211 64.0
CsaV3_3G001880 Cucumis sativus L. HOM05D007142 ORTHO05D008983 2.6e-73 279.6 186 71.5
Eucgr.D02183 Eucalyptus grandis HOM05D007142 ORTHO05D008983 2.6e-73 279.6 196 66.3
Lsat_1_v5_gn_3_16621 Lactuca sativa HOM05D007142 ORTHO05D008983 2.6e-73 279.6 193 67.9
Manes.17G016003 Manihot esculenta HOM05D007142 ORTHO05D008983 2.6e-73 279.6 196 69.9
Sp1g28380 Schrenkiella parvula HOM05D007142 ORTHO05D008983 2.6e-73 279.6 191 69.6
Sed0005643 Sechium edule HOM05D007142 ORTHO05D008983 3.4e-73 279.3 199 65.3
BcaC05g27290 Brassica carinata HOM05D007142 ORTHO05D008983 4.4e-73 278.9 195 69.2
VMungo0251G3176 Vigna mungo HOM05D007142 ORTHO05D008983 4.4e-73 278.9 198 69.2
BraA09t38918Z Brassica rapa HOM05D007142 ORTHO05D008983 5.7e-73 278.5 195 68.7
Medtr4g098620 Medicago truncatula HOM05D007142 ORTHO05D008983 5.7e-73 278.5 197 68.0
Haze_08264 Corylus avellana HOM05D007142 ORTHO05D008983 7.5e-73 278.1 189 69.3
MELO3C013862.2 Cucumis melo HOM05D007142 ORTHO05D008983 9.8e-73 277.7 187 72.2
Gorai.004G186600 Gossypium raimondii HOM05D007142 ORTHO05D008983 1.3e-72 277.3 197 66.5
Psat4g079200 Pisum sativum HOM05D007142 ORTHO05D008983 1.3e-72 277.3 199 68.3
Glyma.17G154151 Glycine max HOM05D007142 ORTHO05D008983 1.7e-72 276.9 190 71.6
Nitab4.5_0014378g0020 Nicotiana tabacum HOM05D007142 ORTHO05D008983 1.7e-72 276.9 191 68.1
Phvul.003G229700 Phaseolus vulgaris HOM05D007142 ORTHO05D008983 1.7e-72 276.9 198 68.7
PGR031G3753 Punica granatum HOM05D007142 ORTHO05D008983 2.2e-72 276.6 188 71.3
TWI15G0113 Tripterygium wilfordii HOM05D007142 ORTHO05D008983 2.2e-72 276.6 187 68.4
HPP92_004488 Vanilla planifolia HOM05D007142 ORTHO05D008983 2.2e-72 276.6 194 67.0
Carub.0001s3093 Capsella rubella HOM05D007142 ORTHO05D008983 2.9e-72 276.2 191 69.1
Cc08_g02450 Coffea canephora HOM05D007142 ORTHO05D000161 2.9e-72 276.2 189 68.8
QL12p006204 Quercus lobata HOM05D007142 ORTHO05D008983 2.9e-72 276.2 190 68.9
Thhalv10008641m.g Eutrema salsugineum HOM05D007142 ORTHO05D008983 3.7e-72 275.8 191 69.1
ATR0049G055 Amborella trichopoda HOM05D007142 ORTHO05D008983 4.9e-72 275.4 196 66.8
Gohir.D08G178400 Gossypium hirsutum HOM05D007142 ORTHO05D008983 6.4e-72 275.0 197 66.0
Nitab4.5_0003100g0010 Nicotiana tabacum HOM05D007142 ORTHO05D008983 6.4e-72 275.0 192 68.2
CiPaw.11G091400 Carya illinoinensis HOM05D007142 ORTHO05D008983 1.4e-71 273.9 190 68.9
ClCG10G001790 Citrullus lanatus HOM05D007142 ORTHO05D008983 1.4e-71 273.9 195 68.2
Ciclev10032530m.g Citrus clementina HOM05D007142 ORTHO05D008983 1.4e-71 273.9 200 66.0
HanXRQChr17g0535721 Helianthus annuus HOM05D007142 ORTHO05D008983 1.8e-71 273.5 188 69.7
TPR.G28665 Trifolium pratense HOM05D007142 ORTHO05D008983 1.8e-71 273.5 197 67.5
vmacro00342 Vaccinium macrocarpon HOM05D007142 ORTHO05D008983 2.4e-71 273.1 196 66.3
Potri.003G089900 Populus trichocarpa HOM05D007142 ORTHO05D008983 3.2e-71 272.7 197 66.0
Lj4g0022330 Lotus japonicus HOM05D007142 ORTHO05D008983 9.2e-71 271.2 198 66.7
Atru.chr6.1752 Acer truncatum HOM05D007142 ORTHO05D008983 1.2e-70 270.8 197 67.0
Mapoly0005s0008 Marchantia polymorpha HOM05D007142 ORTHO05D008983 1.2e-70 270.8 195 68.7
AUR62018753 Chenopodium quinoa HOM05D007142 ORTHO05D008983 7.8e-70 268.1 190 68.9
AUR62007246 Chenopodium quinoa HOM05D007142 ORTHO05D008983 1.7e-69 266.9 190 68.4
FAN13G1057 Fragaria x ananassa HOM05D007142 ORTHO05D008983 2.3e-69 266.5 189 66.7
Sc10g0005600 Simmondsia chinensis HOM05D007142 ORTHO05D008983 2.9e-69 266.2 189 67.2
AagrBONN_evm.TU.Sc2ySwM_362.655 Anthoceros agrestis HOM05D007142 ORTHO05D008983 6.6e-69 265.0 243 59.3
Zm00001eb090700 Zea mays HOM05D007142 ORTHO05D008983 4.3e-68 262.3 196 64.3
Sabra03G0059800 Salix brachista HOM05D007142 ORTHO05D008983 3.6e-67 259.2 212 61.3
MBI04_g22954_MAGBIO Magnolia biondii HOM05D007142 ORTHO05D008983 3.4e-65 252.7 152 77.6
Peaxi162Scf00603g00413 Petunia axillaris HOM05D007142 ORTHO05D008983 9.8e-65 251.1 190 65.3
FAN04G2755 Fragaria x ananassa HOM05D007142 ORTHO05D008983 7.0e-63 245.0 199 61.8
PGSC0003DMG400002104 Solanum tuberosum HOM05D007142 ORTHO05D008983 7.0e-63 245.0 149 77.9
Nn6g33627 Nelumbo nucifera HOM05D007142 ORTHO05D008983 9.2e-63 244.6 149 75.8
Rhsim11G0012900 Rhododendron simsii HOM05D007142 ORTHO05D008983 4.6e-62 242.3 153 73.2
Lj2C242T12 Lonicera japonica HOM05D007142 ORTHO05D008983 6.0e-62 241.9 149 75.2
unitig_32.g11901 Utricularia gibba HOM05D007142 ORTHO05D008983 2.3e-61 240.0 157 73.2
arahy.Tifrunner.gnm1.ann1.KYR2NU Arachis hypogaea HOM05D007142 ORTHO05D008983 5.4e-55 218.8 195 59.0
Gohir.A08G158100 Gossypium hirsutum HOM05D007142 ORTHO05D008983 3.0e-53 213.0 170 59.4
Os11g0220300 Oryza sativa ssp. japonica HOM05D007142 ORTHO05D008983 2.4e-47 193.4 152 63.2
PRCOL_00005169 Prasinoderma coloniale HOM05D007142 ORTHO05D008983 8.4e-40 168.3 167 50.3
SMO367G0110 Selaginella moellendorffii HOM05D007142 ORTHO05D008983 4.4e-33 146.0 102 69.6
MCO11G179 Micromonas commoda HOM05D007142 ORTHO05D008983 1.8e-26 124.0 161 42.2
Os07g0120051 Oryza sativa ssp. japonica HOM05D007142 ORTHO05D008983 5.8e-25 119.0 127 52.8
Cre10.g446500 Chlamydomonas reinhardtii HOM05D007142 ORTHO05D008983 4.9e-16 89.4 158 35.4
Dinv25200 Davidia involucrata HOM05D007142 ORTHO05D008983 2.3e-13 80.5 56 71.4
Glyma.05G112900 Glycine max HOM05D007142 ORTHO05D008983 1.9e-12 77.4 159 32.1
Hma1.2p1_0585F.1_g183620 Hydrangea macrophylla HOM05D007142 ORTHO05D008983 5.0e-08 62.8 33 87.9
Os06g0318400 Oryza sativa ssp. japonica HOM05D007142 ORTHO05D008983 9.3e-07 58.5 68 44.1
Oeu029960.1 Olea europaea HOM05D007142 ORTHO05D008983 2.1e-06 57.4 33 81.8
Os11g0275900 Oryza sativa ssp. japonica HOM05D007142 ORTHO05D008983 7.9e-06 55.5 48 64.6


User provided reference genes

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