Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34356 Sequoiadendron giganteum HOM05D002536 ORTHO05D006290 8.2e-182 640.2 306 100.0
Manes.01G115300 Manihot esculenta HOM05D002536 ORTHO05D006290 5.0e-22 109.4 69 73.9
CiPaw.04G045800 Carya illinoinensis HOM05D002536 ORTHO05D006290 1.5e-21 107.8 69 71.0
Rhsim10G0079100 Rhododendron simsii HOM05D002536 ORTHO05D006290 1.9e-21 107.5 69 71.0
ECA232G3521 Erigeron canadensis HOM05D002536 ORTHO05D006290 2.5e-21 107.1 69 69.6
Prupe.3G158200 Prunus persica HOM05D002536 ORTHO05D006290 5.5e-21 105.9 69 69.6
arahy.Tifrunner.gnm1.ann1.3WSI1D Arachis hypogaea HOM05D002536 ORTHO05D006290 9.4e-21 105.1 69 71.0
arahy.Tifrunner.gnm1.ann1.DT5JRU Arachis hypogaea HOM05D002536 ORTHO05D006290 9.4e-21 105.1 69 71.0
Lsat_1_v5_gn_4_154740 Lactuca sativa HOM05D002536 ORTHO05D006290 1.2e-20 104.8 69 68.1
LjContig00141g0005291 Lotus japonicus HOM05D002536 ORTHO05D006290 1.2e-20 104.8 69 71.0
Actinidia15923 Actinidia chinensis HOM05D002536 ORTHO05D006290 2.1e-20 104.0 69 68.1
TWI74G1499 Tripterygium wilfordii HOM05D002536 ORTHO05D006290 2.1e-20 104.0 69 69.6
Glyma.02G247400 Glycine max HOM05D002536 ORTHO05D006290 2.7e-20 103.6 69 69.6
HanXRQChr11g0325221 Helianthus annuus HOM05D002536 ORTHO05D006290 2.7e-20 103.6 69 69.6
Potri.017G123900 Populus trichocarpa HOM05D002536 ORTHO05D006290 2.7e-20 103.6 69 68.1
PGR004G1192 Punica granatum HOM05D002536 ORTHO05D006290 2.7e-20 103.6 67 68.7
Cfa007855 Carpinus fangiana HOM05D002536 ORTHO05D006290 3.6e-20 103.2 74 64.9
Ciclev10011939m.g Citrus clementina HOM05D002536 ORTHO05D006290 3.6e-20 103.2 69 69.6
Lalb_Chr04g0251281 Lupinus albus HOM05D002536 ORTHO05D006290 3.6e-20 103.2 69 71.0
MD09G1261000 Malus domestica HOM05D002536 ORTHO05D006290 4.7e-20 102.8 69 68.1
Dinv19005 Davidia involucrata HOM05D002536 ORTHO05D006290 6.1e-20 102.4 67 68.7
FvH4_1g30040 Fragaria vesca HOM05D002536 ORTHO05D006290 1.0e-19 101.7 69 71.0
Medtr5g079770 Medicago truncatula HOM05D002536 ORTHO05D006290 1.0e-19 101.7 72 65.3
Sabra17G0104800 Salix brachista HOM05D002536 ORTHO05D006290 1.0e-19 101.7 67 67.2
Atru.chr4.1673 Acer truncatum HOM05D002536 ORTHO05D006290 1.4e-19 101.3 69 69.6
CANSAT78G2192 Cannabis sativa HOM05D002536 ORTHO05D006290 1.4e-19 101.3 69 65.2
Ca_05868_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 1.4e-19 101.3 67 70.1
CsaV3_1G043810 Cucumis sativus L. HOM05D002536 ORTHO05D006290 1.4e-19 101.3 69 65.2
Nn3g18196 Nelumbo nucifera HOM05D002536 ORTHO05D006290 1.4e-19 101.3 69 68.1
Aqoxy3G04016 Aquilegia oxysepala HOM05D002536 ORTHO05D006290 1.8e-19 100.9 69 63.8
Pp3c15_1450 Physcomitrium patens HOM05D002536 ORTHO05D006290 2.3e-19 100.5 80 55.0
Psat2g045240 Pisum sativum HOM05D002536 ORTHO05D006290 2.3e-19 100.5 72 66.7
Sabra17G0102100 Salix brachista HOM05D002536 ORTHO05D006290 2.3e-19 100.5 69 65.2
VMungo0647G1217 Vigna mungo HOM05D002536 ORTHO05D006290 2.3e-19 100.5 74 66.2
TAR371G0457 Trochodendron aralioides HOM05D002536 ORTHO05D006290 3.0e-19 100.1 69 63.8
Migut.L00470 Erythranthe guttata HOM05D002536 ORTHO05D006290 4.0e-19 99.8 69 63.8
GSVIVG01030877001 Vitis vinifera HOM05D002536 ORTHO05D006290 4.0e-19 99.8 68 66.2
MELO3C020300.2 Cucumis melo HOM05D002536 ORTHO05D006290 5.2e-19 99.4 69 62.3
FAN19G0538 Fragaria x ananassa HOM05D002536 ORTHO05D006290 5.2e-19 99.4 69 69.6
FAN28G1150 Fragaria x ananassa HOM05D002536 ORTHO05D006290 5.2e-19 99.4 69 69.6
Glyma.14G068800 Glycine max HOM05D002536 ORTHO05D006290 5.2e-19 99.4 68 69.1
QL11p004402 Quercus lobata HOM05D002536 ORTHO05D006290 5.2e-19 99.4 69 65.2
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 6.8e-19 99.0 70 65.7
Phvul.008G233500 Phaseolus vulgaris HOM05D002536 ORTHO05D006290 6.8e-19 99.0 74 63.5
vmacro05501 Vaccinium macrocarpon HOM05D002536 ORTHO05D006290 6.8e-19 99.0 68 67.6
PSO017G6098 Papaver somniferum HOM05D002536 ORTHO05D006290 1.5e-18 97.8 69 63.8
RcHm_v2.0_Chr3g0492101 Rosa chinensis HOM05D002536 ORTHO05D006290 1.5e-18 97.8 68 66.2
CAN.G625.81 Capsicum annuum HOM05D002536 ORTHO05D006290 2.0e-18 97.4 69 59.4
Solyc02g091330.4 Solanum lycopersicum HOM05D002536 ORTHO05D006290 2.6e-18 97.1 67 61.2
PGSC0003DMG400030643 Solanum tuberosum HOM05D002536 ORTHO05D006290 2.6e-18 97.1 67 61.2
SGA_v2.0_scaffold329G48866 Striga asiatica HOM05D002536 ORTHO05D006290 2.6e-18 97.1 69 62.3
Eucgr.F02817 Eucalyptus grandis HOM05D002536 ORTHO05D006290 3.4e-18 96.7 67 62.7
Hund13689 Selenicereus undatus HOM05D002536 ORTHO05D006290 3.4e-18 96.7 69 60.9
Nitab4.5_0002248g0030 Nicotiana tabacum HOM05D002536 ORTHO05D006290 4.4e-18 96.3 68 58.8
Oeu047421.1 Olea europaea HOM05D002536 ORTHO05D006290 4.4e-18 96.3 69 60.9
A07p33460 Brassica napus HOM05D002536 ORTHO05D006290 5.7e-18 95.9 69 65.2
AUR62023197 Chenopodium quinoa HOM05D002536 ORTHO05D006290 5.7e-18 95.9 69 59.4
Zm00001eb088880 Zea mays HOM05D002536 ORTHO05D006290 5.7e-18 95.9 67 59.7
Ah.10g037990 Amaranthus hybridus HOM05D002536 ORTHO05D006290 7.5e-18 95.5 69 59.4
Sc11g0008590 Simmondsia chinensis HOM05D002536 ORTHO05D006290 7.5e-18 95.5 69 60.9
BcaB03g15263 Brassica carinata HOM05D002536 ORTHO05D006290 9.8e-18 95.1 69 65.2
BraA07t30972Z Brassica rapa HOM05D002536 ORTHO05D006290 9.8e-18 95.1 69 65.2
CBR_g28641 Chara braunii HOM05D002536 ORTHO05D006290 9.8e-18 95.1 74 55.4
Thhalv10018669m.g Eutrema salsugineum HOM05D002536 ORTHO05D006290 9.8e-18 95.1 99 51.5
BcaC08g46049 Brassica carinata HOM05D002536 ORTHO05D006290 1.3e-17 94.7 69 63.8
CDE04G0829 Ceratophyllum demersum HOM05D002536 ORTHO05D006290 1.3e-17 94.7 67 61.2
Cc07_g08220 Coffea canephora HOM05D002536 ORTHO05D006290 1.3e-17 94.7 69 60.9
Lalb_Chr04g0249391 Lupinus albus HOM05D002536 ORTHO05D006290 1.3e-17 94.7 69 63.8
Nitab4.5_0004399g0050 Nicotiana tabacum HOM05D002536 ORTHO05D006290 1.3e-17 94.7 68 55.9
Sed0021694 Sechium edule HOM05D002536 ORTHO05D006290 1.3e-17 94.7 69 62.3
THA.LOC104805600 Tarenaya hassleriana HOM05D002536 ORTHO05D006290 1.3e-17 94.7 69 62.3
Cpa.g.sc116.21 Carica papaya HOM05D002536 ORTHO05D006290 2.2e-17 94.0 69 65.2
Sopen02g035950 Solanum pennellii HOM05D002536 ORTHO05D006290 2.2e-17 94.0 67 59.7
Os04g0132300 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D006290 2.8e-17 93.6 69 56.5
Sp5g21560 Schrenkiella parvula HOM05D002536 ORTHO05D006290 3.7e-17 93.2 70 61.4
Peaxi162Scf00803g00527 Petunia axillaris HOM05D002536 ORTHO05D006290 4.9e-17 92.8 69 58.0
EL10Ac2g04489 Beta vulgaris HOM05D002536 ORTHO05D006290 6.3e-17 92.4 67 58.2
Lj4A178G42 Lonicera japonica HOM05D002536 ORTHO05D006290 8.3e-17 92.0 73 58.9
Duzib211G0581 Durio zibethinus HOM05D002536 ORTHO05D006290 1.4e-16 91.3 67 59.7
CARHR058490 Cardamine hirsuta HOM05D002536 ORTHO05D006290 2.4e-16 90.5 69 59.4
Gohir.D08G062400 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.4e-16 90.5 69 59.4
Gorai.004G064600 Gossypium raimondii HOM05D002536 ORTHO05D006290 2.4e-16 90.5 69 59.4
AT1G66510 Arabidopsis thaliana HOM05D002536 ORTHO05D006290 3.1e-16 90.1 69 59.4
COL.COLO4_15704 Corchorus olitorius HOM05D002536 ORTHO05D006290 5.4e-16 89.4 69 59.4
AagrBONN_evm.TU.Sc2ySwM_368.3391 Anthoceros agrestis HOM05D002536 ORTHO05D006290 9.1e-16 88.6 68 50.0
C06p39850 Brassica napus HOM05D002536 ORTHO05D006290 1.2e-15 88.2 65 61.5
BolC6t39073H Brassica oleracea HOM05D002536 ORTHO05D006290 1.2e-15 88.2 65 61.5
AUR62023246 Chenopodium quinoa HOM05D002536 ORTHO05D006290 1.2e-15 88.2 69 55.1
AagrBONN_evm.TU.Sc2ySwM_344.4243 Anthoceros agrestis HOM05D002536 ORTHO05D006290 2.0e-15 87.4 69 49.3
Gohir.A08G052800 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.7e-15 87.0 69 58.0
AL2G23020 Arabidopsis lyrata HOM05D002536 ORTHO05D006290 3.5e-15 86.7 69 58.0
Carub.0002s1253 Capsella rubella HOM05D002536 ORTHO05D006290 5.9e-15 85.9 69 58.0
Aa31LG2G3150 Aethionema arabicum HOM05D002536 ORTHO05D006290 2.3e-14 84.0 69 56.5
Thecc.04G122200 Theobroma cacao HOM05D002536 ORTHO05D006290 2.9e-14 83.6 69 55.1
SEGI_40212 Sequoiadendron giganteum HOM05D009004 ORTHO05D011183 3.8e-14 83.2 52 78.8
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 1.1e-13 81.6 120 40.8
DCAR_022460 Daucus carota HOM05D002536 ORTHO05D006290 2.5e-13 80.5 69 49.3
TPR.G39323 Trifolium pratense HOM05D002536 ORTHO05D006290 1.2e-12 78.2 79 57.0
SMO196G0007 Selaginella moellendorffii HOM05D002536 ORTHO05D006290 2.6e-10 70.5 85 45.9
VMungo0464G1199 Vigna mungo HOM05D002536 ORTHO05D006290 1.7e-09 67.8 53 62.3
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 4.9e-09 66.2 71 47.9
TPR.G3492 Trifolium pratense HOM05D002536 ORTHO05D006290 1.7e-06 57.8 39 64.1


User provided reference genes

Program Settings