Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34327 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 1.5e-84 316.2 167 100.0
AagrBONN_evm.TU.Sc2ySwM_368.1985 Anthoceros agrestis HOM05D001551 ORTHO05D005859 5.5e-15 85.1 67 61.2
Mapoly0002s0145 Marchantia polymorpha HOM05D001551 ORTHO05D005859 7.2e-15 84.7 67 61.2
Pp3c5_10130 Physcomitrium patens HOM05D001551 ORTHO05D005859 2.1e-14 83.2 63 65.1
Pp3c6_23000 Physcomitrium patens HOM05D001551 ORTHO05D005859 8.0e-14 81.3 64 62.5
SMO118G0459 Selaginella moellendorffii HOM05D001551 ORTHO05D005859 6.7e-13 78.2 62 61.3
Eucgr.K02189 Eucalyptus grandis HOM05D001551 ORTHO05D005859 7.5e-12 74.7 65 60.0
Manes.06G127400 Manihot esculenta HOM05D001551 ORTHO05D005859 9.7e-12 74.3 119 37.8
Nn4g22121 Nelumbo nucifera HOM05D001551 ORTHO05D005859 9.7e-12 74.3 67 56.7
Gorai.003G117100 Gossypium raimondii HOM05D001551 ORTHO05D005859 1.3e-11 73.9 67 56.7
CBR_g30803 Chara braunii HOM05D001551 ORTHO05D005859 1.7e-11 73.6 64 57.8
Gohir.A03G055800 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.7e-11 73.6 67 56.7
Gohir.D03G110700 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.7e-11 73.6 67 56.7
Solyc06g068760.3 Solanum lycopersicum HOM05D001551 ORTHO05D005859 2.8e-11 72.8 66 57.6
Sopen06g026040 Solanum pennellii HOM05D001551 ORTHO05D005859 2.8e-11 72.8 66 57.6
MBI07_g13940_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 4.8e-11 72.0 69 50.7
Migut.I00664 Erythranthe guttata HOM05D001551 ORTHO05D005859 6.3e-11 71.6 66 54.5
CAN.G1089.16 Capsicum annuum HOM05D001551 ORTHO05D005859 8.2e-11 71.2 66 56.1
PGSC0003DMG400025575 Solanum tuberosum HOM05D001551 ORTHO05D005859 8.2e-11 71.2 66 56.1
SGA_v2.0_scaffold37G14673 Striga asiatica HOM05D001551 ORTHO05D005859 1.1e-10 70.9 66 54.5
Aqoxy5G03068 Aquilegia oxysepala HOM05D001551 ORTHO05D005859 1.4e-10 70.5 67 53.7
Nitab4.5_0007345g0100 Nicotiana tabacum HOM05D001551 ORTHO05D005859 1.4e-10 70.5 66 56.1
Nitab4.5_0012775g0030 Nicotiana tabacum HOM05D001551 ORTHO05D005859 1.4e-10 70.5 66 56.1
TWI39G0428 Tripterygium wilfordii HOM05D001551 ORTHO05D005859 1.4e-10 70.5 67 53.7
Dinv23235 Davidia involucrata HOM05D001551 ORTHO05D005859 1.8e-10 70.1 66 54.5
PGR044G0460 Punica granatum HOM05D001551 ORTHO05D005859 1.8e-10 70.1 65 55.4
Thecc.03G141800 Theobroma cacao HOM05D001551 ORTHO05D005859 1.8e-10 70.1 66 56.1
BcaC01g06112 Brassica carinata HOM05D001551 ORTHO05D005859 3.1e-10 69.3 65 52.3
Sp6g13170 Schrenkiella parvula HOM05D001551 ORTHO05D005859 3.1e-10 69.3 67 50.7
SGA_v2.0_scaffold5G02806 Striga asiatica HOM05D001551 ORTHO05D005859 3.1e-10 69.3 86 47.7
Cpa.g.sc2215.3 Carica papaya HOM05D001551 ORTHO05D005859 4.1e-10 68.9 67 53.7
Cc04_g05770 Coffea canephora HOM05D001551 ORTHO05D005859 4.1e-10 68.9 66 53.0
Oeu051186.2 Olea europaea HOM05D001551 ORTHO05D005859 4.1e-10 68.9 84 45.2
Sed0027340 Sechium edule HOM05D001551 ORTHO05D005859 4.1e-10 68.9 66 51.5
Sc04g0000130 Simmondsia chinensis HOM05D001551 ORTHO05D005859 4.1e-10 68.9 59 61.0
THA.LOC104808046 Tarenaya hassleriana HOM05D001551 ORTHO05D005859 4.1e-10 68.9 58 62.1
TWI23G1313 Tripterygium wilfordii HOM05D001551 ORTHO05D005859 4.1e-10 68.9 67 53.7
MSTRG.22814 Avicennia marina HOM05D001551 ORTHO05D005859 5.3e-10 68.6 83 47.0
Duzib205G1491 Durio zibethinus HOM05D001551 ORTHO05D005859 5.3e-10 68.6 66 54.5
Hund10026 Selenicereus undatus HOM05D001551 ORTHO05D005859 5.3e-10 68.6 59 59.3
TAR371G0091 Trochodendron aralioides HOM05D001551 ORTHO05D005859 5.3e-10 68.6 67 50.7
CDE02G1325 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 7.0e-10 68.2 67 52.2
COL.COLO4_37269 Corchorus olitorius HOM05D001551 ORTHO05D005859 7.0e-10 68.2 69 50.7
Sc04g0000180 Simmondsia chinensis HOM05D001551 ORTHO05D005859 7.0e-10 68.2 58 62.1
TAR629G2635 Trochodendron aralioides HOM05D001551 ORTHO05D005859 7.0e-10 68.2 67 50.7
unitig_27.g25103 Utricularia gibba HOM05D001551 ORTHO05D005859 7.0e-10 68.2 66 54.5
SalBow7G1162 Salvia bowleyana HOM05D001551 ORTHO05D005859 9.1e-10 67.8 86 45.3
THA.LOC104811554 Tarenaya hassleriana HOM05D001551 ORTHO05D005859 9.1e-10 67.8 87 46.0
Atru.chr6.1937 Acer truncatum HOM05D001551 ORTHO05D005859 1.2e-09 67.4 67 52.2
Aa31LG3G7480 Aethionema arabicum HOM05D001551 ORTHO05D005859 1.2e-09 67.4 67 49.3
A03p16410 Brassica napus HOM05D001551 ORTHO05D005859 1.2e-09 67.4 67 49.3
BraA03t10931Z Brassica rapa HOM05D001551 ORTHO05D005859 1.2e-09 67.4 67 49.3
ClCG03G004050 Citrullus lanatus HOM05D001551 ORTHO05D005859 1.2e-09 67.4 60 53.3
FvH4_5g09710 Fragaria vesca HOM05D001551 ORTHO05D005859 1.2e-09 67.4 88 54.5
QL10p000300 Quercus lobata HOM05D001551 ORTHO05D005859 1.2e-09 67.4 67 50.7
GSVIVG01008663001 Vitis vinifera HOM05D001551 ORTHO05D005859 1.2e-09 67.4 67 52.2
MELO3C002387.2 Cucumis melo HOM05D001551 ORTHO05D005859 1.6e-09 67.0 59 54.2
CsaV3_1G009930 Cucumis sativus L. HOM05D001551 ORTHO05D005859 1.6e-09 67.0 59 54.2
ECA246G1749 Erigeron canadensis HOM05D001551 ORTHO05D005859 1.6e-09 67.0 67 50.7
FAN04G0171 Fragaria x ananassa HOM05D001551 ORTHO05D005859 1.6e-09 67.0 88 54.5
Gohir.A11G038800 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.6e-09 67.0 66 53.0
Gohir.D11G042000 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.6e-09 67.0 66 53.0
Gorai.007G045200 Gossypium raimondii HOM05D001551 ORTHO05D005859 1.6e-09 67.0 66 53.0
Manes.14G043800 Manihot esculenta HOM05D001551 ORTHO05D005859 1.6e-09 67.0 67 50.7
vmacro16761 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 1.6e-09 67.0 85 44.7
AL8G25230 Arabidopsis lyrata HOM05D001551 ORTHO05D005859 2.0e-09 66.6 67 49.3
CDE06G0746 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 2.0e-09 66.6 67 52.2
AT5G51020 Arabidopsis thaliana HOM05D001551 ORTHO05D005859 2.7e-09 66.2 67 49.3
EL10Ac5g11272 Beta vulgaris HOM05D001551 ORTHO05D005859 2.7e-09 66.2 88 44.3
BcaC09g50811 Brassica carinata HOM05D001551 ORTHO05D005859 2.7e-09 66.2 67 50.7
A01p16340 Brassica napus HOM05D001551 ORTHO05D005859 2.7e-09 66.2 67 50.7
C01p20490 Brassica napus HOM05D001551 ORTHO05D005859 2.7e-09 66.2 67 50.7
BraA01t01589Z Brassica rapa HOM05D001551 ORTHO05D005859 2.7e-09 66.2 67 50.7
Carub.0008s1102 Capsella rubella HOM05D001551 ORTHO05D005859 2.7e-09 66.2 67 47.8
Hma1.2p1_0577F.1_g182180 Hydrangea macrophylla HOM05D001551 ORTHO05D005859 2.7e-09 66.2 58 56.9
BcaNung03998 Brassica carinata HOM05D001551 ORTHO05D005859 3.5e-09 65.9 67 50.7
CARHR257170 Cardamine hirsuta HOM05D001551 ORTHO05D005859 3.5e-09 65.9 59 54.2
Thhalv10025970m.g Eutrema salsugineum HOM05D001551 ORTHO05D005859 3.5e-09 65.9 67 50.7
HanXRQChr05g0155371 Helianthus annuus HOM05D001551 ORTHO05D005859 3.5e-09 65.9 66 51.5
MD06G1129000 Malus domestica HOM05D001551 ORTHO05D005859 3.5e-09 65.9 59 55.9
Rhsim12G0181300 Rhododendron simsii HOM05D001551 ORTHO05D005859 3.5e-09 65.9 66 51.5
Sabra12G0080000 Salix brachista HOM05D001551 ORTHO05D005859 4.5e-09 65.5 67 49.3
CiPaw.12G000400 Carya illinoinensis HOM05D001551 ORTHO05D005859 5.9e-09 65.1 64 50.0
Ca_10874_v3 Cicer arietinum L. HOM05D001551 ORTHO05D005859 5.9e-09 65.1 67 47.8
FAN18G2118 Fragaria x ananassa HOM05D001551 ORTHO05D005859 5.9e-09 65.1 88 53.4
Potri.012G109800 Populus trichocarpa HOM05D001551 ORTHO05D005859 5.9e-09 65.1 67 47.8
Sp7g23070 Schrenkiella parvula HOM05D001551 ORTHO05D005859 5.9e-09 65.1 67 49.3
Actinidia08913 Actinidia chinensis HOM05D001551 ORTHO05D005859 7.7e-09 64.7 66 50.0
AUR62043378 Chenopodium quinoa HOM05D001551 ORTHO05D005859 7.7e-09 64.7 58 58.6
Lj9C488G12 Lonicera japonica HOM05D001551 ORTHO05D005859 7.7e-09 64.7 66 50.0
MD14G1145900 Malus domestica HOM05D001551 ORTHO05D005859 7.7e-09 64.7 97 42.3
PSO017G1738 Papaver somniferum HOM05D001551 ORTHO05D005859 7.7e-09 64.7 67 47.8
PSO478G5149 Papaver somniferum HOM05D001551 ORTHO05D005859 7.7e-09 64.7 67 47.8
Prupe.5G140300 Prunus persica HOM05D001551 ORTHO05D005859 7.7e-09 64.7 97 42.3
BolC1t01980H Brassica oleracea HOM05D001551 ORTHO05D005859 1.0e-08 64.3 67 49.3
FAN13G0525 Fragaria x ananassa HOM05D001551 ORTHO05D005859 1.0e-08 64.3 60 55.0
Lsat_1_v5_gn_5_9381 Lactuca sativa HOM05D001551 ORTHO05D005859 1.0e-08 64.3 66 48.5
Actinidia36846 Actinidia chinensis HOM05D001551 ORTHO05D005859 1.3e-08 63.9 58 53.4
AUR62011939 Chenopodium quinoa HOM05D001551 ORTHO05D005859 1.7e-08 63.5 57 59.6
Rhsim08G0198700 Rhododendron simsii HOM05D001551 ORTHO05D005859 1.7e-08 63.5 58 53.4
Ciclev10032408m.g Citrus clementina HOM05D001551 ORTHO05D005859 2.2e-08 63.2 59 54.2
Cfa018920 Carpinus fangiana HOM05D001551 ORTHO05D005859 2.9e-08 62.8 66 51.5
FAN08G3006 Fragaria x ananassa HOM05D001551 ORTHO05D005859 2.9e-08 62.8 60 53.3
RcHm_v2.0_Chr7g0188531 Rosa chinensis HOM05D001551 ORTHO05D005859 2.9e-08 62.8 83 47.0
vmacro19115 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 2.9e-08 62.8 58 51.7
Cfa018698 Carpinus fangiana HOM05D001551 ORTHO05D005859 3.8e-08 62.4 66 51.5
DCAR_025640 Daucus carota HOM05D001551 ORTHO05D005859 3.8e-08 62.4 58 53.4
Lj1g0018460 Lotus japonicus HOM05D001551 ORTHO05D005859 3.8e-08 62.4 67 46.3
arahy.Tifrunner.gnm1.ann1.D8JD58 Arachis hypogaea HOM05D001551 ORTHO05D005859 5.0e-08 62.0 58 53.4
arahy.Tifrunner.gnm1.ann1.Q2CTBB Arachis hypogaea HOM05D001551 ORTHO05D005859 5.0e-08 62.0 58 53.4
AUR62032208 Chenopodium quinoa HOM05D001551 ORTHO05D005859 5.0e-08 62.0 58 56.9
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 5.0e-08 62.0 66 50.0
CSS0038575 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 6.5e-08 61.6 58 53.4
Psat5g055440 Pisum sativum HOM05D001551 ORTHO05D005859 6.5e-08 61.6 67 46.3
Cfa013473 Carpinus fangiana HOM05D001551 ORTHO05D005859 8.5e-08 61.2 65 52.3
AUR62043863 Chenopodium quinoa HOM05D001551 ORTHO05D005859 1.1e-07 60.8 54 59.3
Lalb_Chr08g0237601 Lupinus albus HOM05D001551 ORTHO05D005859 1.1e-07 60.8 67 43.3
Sed0019000 Sechium edule HOM05D001551 ORTHO05D005859 1.1e-07 60.8 59 49.2
CSS0002484 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 1.5e-07 60.5 58 53.4
Medtr3g098510 Medicago truncatula HOM05D001551 ORTHO05D005859 1.5e-07 60.5 67 43.3
Phvul.009G160500 Phaseolus vulgaris HOM05D001551 ORTHO05D005859 3.2e-07 59.3 67 43.3
Hund02515 Selenicereus undatus HOM05D001551 ORTHO05D005859 3.2e-07 59.3 58 51.7
Glyma.04G202400 Glycine max HOM05D001551 ORTHO05D005859 4.2e-07 58.9 67 43.3
Glyma.06G163100 Glycine max HOM05D001551 ORTHO05D005859 4.2e-07 58.9 67 43.3
Thhalv10014437m.g Eutrema salsugineum HOM05D001551 ORTHO05D005859 5.5e-07 58.5 53 52.8


User provided reference genes

Program Settings