Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34299 Sequoiadendron giganteum HOM05D002368 ORTHO05D002425 6.5e-143 510.8 265 100.0
SEGI_11777 Sequoiadendron giganteum HOM05D002368 ORTHO05D002425 1.1e-68 264.2 141 99.3
SEGI_14588 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 9.4e-17 91.7 105 43.8
ATR0691G157 Amborella trichopoda HOM05D002368 ORTHO05D002425 6.7e-15 85.5 113 46.9
Zm00001eb253320 Zea mays HOM05D002368 ORTHO05D002425 2.5e-14 83.6 114 42.1
Nn4g23546 Nelumbo nucifera HOM05D002368 ORTHO05D002425 9.7e-14 81.6 113 43.4
QL03p073315 Quercus lobata HOM05D002368 ORTHO05D002425 9.7e-14 81.6 117 44.4
Sabra10G0106200 Salix brachista HOM05D001549 ORTHO05D003098 1.7e-13 80.9 128 38.3
Aqoxy3G03754 Aquilegia oxysepala HOM05D002368 ORTHO05D002425 2.2e-13 80.5 121 42.1
GSVIVG01008159001 Vitis vinifera HOM05D002368 ORTHO05D002425 2.8e-13 80.1 119 44.5
Actinidia10440 Actinidia chinensis HOM05D002368 ORTHO05D002425 3.7e-13 79.7 103 47.6
HPP92_017966 Vanilla planifolia HOM05D002368 ORTHO05D002425 3.7e-13 79.7 124 39.5
Manes.06G079300 Manihot esculenta HOM05D002368 ORTHO05D002425 6.3e-13 79.0 121 45.5
Phvul.003G038100 Phaseolus vulgaris HOM05D002368 ORTHO05D002425 6.3e-13 79.0 121 43.8
vmacro17661 Vaccinium macrocarpon HOM05D002368 ORTHO05D002425 6.3e-13 79.0 102 43.1
Oeu010197.3 Olea europaea HOM05D002368 ORTHO05D002425 8.2e-13 78.6 104 44.2
CSS0027328 Camellia sinensis var. sinensis HOM05D002368 ORTHO05D002425 1.4e-12 77.8 104 48.1
QL10p020809 Quercus lobata HOM05D002368 ORTHO05D002425 1.4e-12 77.8 112 42.0
MBI14_g34640_MAGBIO Magnolia biondii HOM05D002368 ORTHO05D002425 2.4e-12 77.0 115 41.7
Dinv38638 Davidia involucrata HOM05D002368 ORTHO05D002425 3.1e-12 76.6 102 41.2
SEGI_01019 Sequoiadendron giganteum HOM05D000077 ORTHO05D000552 3.1e-12 76.6 115 42.6
Lj2g0028243 Lotus japonicus HOM05D002368 ORTHO05D002425 5.3e-12 75.9 120 41.7
Sed0005180 Sechium edule HOM05D002368 ORTHO05D002425 5.3e-12 75.9 116 43.1
CANSAT64G1161 Cannabis sativa HOM05D002368 ORTHO05D002425 6.9e-12 75.5 115 43.5
Potri.010G137900 Populus trichocarpa HOM05D002368 ORTHO05D002425 6.9e-12 75.5 117 39.3
Rhsim09G0121900 Rhododendron simsii HOM05D002368 ORTHO05D002425 9.1e-12 75.1 119 42.0
Potri.008G111900 Populus trichocarpa HOM05D002368 ORTHO05D002425 1.2e-11 74.7 117 41.0
Sabra08G0084600 Salix brachista HOM05D002368 ORTHO05D002425 1.2e-11 74.7 107 39.3
AL1G39450 Arabidopsis lyrata HOM05D002368 ORTHO05D002425 1.5e-11 74.3 116 44.0
CiPaw.05G121400 Carya illinoinensis HOM05D002368 ORTHO05D002425 1.5e-11 74.3 118 41.5
Cc04_g08230 Coffea canephora HOM05D002368 ORTHO05D002425 1.5e-11 74.3 102 46.1
Nn3g17546 Nelumbo nucifera HOM05D002368 ORTHO05D002425 1.5e-11 74.3 117 44.4
TWI31G1386 Tripterygium wilfordii HOM05D002368 ORTHO05D002425 1.5e-11 74.3 122 44.3
Os02g0726400 Oryza sativa ssp. japonica HOM05D002368 ORTHO05D002425 2.0e-11 73.9 117 39.3
CSS0029037 Camellia sinensis var. sinensis HOM05D002368 ORTHO05D002425 2.6e-11 73.6 102 42.2
CiPaw.06G095200 Carya illinoinensis HOM05D002368 ORTHO05D002425 2.6e-11 73.6 140 41.4
Pp3c4_2250 Physcomitrium patens HOM05D002368 ORTHO05D002425 3.4e-11 73.2 167 35.3
CARHR025620 Cardamine hirsuta HOM05D002368 ORTHO05D002425 4.5e-11 72.8 114 43.0
Manes.14G090500 Manihot esculenta HOM05D002368 ORTHO05D002425 4.5e-11 72.8 120 40.8
Hma1.2p1_0060F.1_g032700 Hydrangea macrophylla HOM05D002368 ORTHO05D002425 5.9e-11 72.4 108 44.4
Atru.chr11.1556 Acer truncatum HOM05D002368 ORTHO05D002425 1.0e-10 71.6 130 39.2
Cpa.g.sc3.227 Carica papaya HOM05D002368 ORTHO05D002425 1.0e-10 71.6 115 45.2
Lalb_Chr10g0099181 Lupinus albus HOM05D002368 ORTHO05D002425 1.0e-10 71.6 120 45.0
TPR.G2039 Trifolium pratense HOM05D002368 ORTHO05D002425 1.0e-10 71.6 112 39.3
Glyma.05G018000 Glycine max HOM05D002368 ORTHO05D002425 1.7e-10 70.9 117 37.6
MD16G1055200 Malus domestica HOM05D002368 ORTHO05D002425 1.7e-10 70.9 119 43.7
AT1G69030 Arabidopsis thaliana HOM05D002368 ORTHO05D002425 2.2e-10 70.5 124 38.7
ClCG06G015400 Citrullus lanatus HOM05D002368 ORTHO05D002425 2.2e-10 70.5 117 39.3
TPR.G38536 Trifolium pratense HOM05D002368 ORTHO05D002425 2.2e-10 70.5 118 42.4
AT1G26300 Arabidopsis thaliana HOM05D002368 ORTHO05D002425 2.9e-10 70.1 130 37.7
CsaV3_5G033490 Cucumis sativus L. HOM05D002368 ORTHO05D002425 2.9e-10 70.1 123 39.8
Prupe.1G293800 Prunus persica HOM05D002368 ORTHO05D002425 2.9e-10 70.1 120 41.7
Glyma.01G065100 Glycine max HOM05D002368 ORTHO05D002425 3.8e-10 69.7 120 43.3
Medtr5g048180 Medicago truncatula HOM05D002368 ORTHO05D002425 3.8e-10 69.7 108 39.8
Thecc.02G322500 Theobroma cacao HOM05D002368 ORTHO05D002425 3.8e-10 69.7 117 41.0
Haze_11857 Corylus avellana HOM05D002368 ORTHO05D002425 5.0e-10 69.3 122 41.0
PGSC0003DMG403024620 Solanum tuberosum HOM05D002368 ORTHO05D002425 6.5e-10 68.9 104 40.4
Carub.0002s1564 Capsella rubella HOM05D002368 ORTHO05D002425 8.5e-10 68.6 123 38.2
THA.LOC104821990 Tarenaya hassleriana HOM05D002368 ORTHO05D002425 8.5e-10 68.6 113 39.8
Cpa.g.sc289.4 Carica papaya HOM05D002368 ORTHO05D002425 1.1e-09 68.2 116 40.5
Cfa008849 Carpinus fangiana HOM05D002368 ORTHO05D002425 1.4e-09 67.8 115 42.6
DCAR_014021 Daucus carota HOM05D002368 ORTHO05D002425 1.4e-09 67.8 105 44.8
Psat2g088280 Pisum sativum HOM05D002368 ORTHO05D002425 1.4e-09 67.8 114 42.1
PGR083G2706 Punica granatum HOM05D002368 ORTHO05D002425 1.4e-09 67.8 112 36.6
Actinidia13407 Actinidia chinensis HOM05D002368 ORTHO05D002425 2.5e-09 67.0 113 39.8
MELO3C012169.2 Cucumis melo HOM05D002368 ORTHO05D002425 2.5e-09 67.0 108 40.7
Lj6A773T132 Lonicera japonica HOM05D002368 ORTHO05D002425 3.2e-09 66.6 113 40.7
Manes.14G089400 Manihot esculenta HOM05D002368 ORTHO05D002425 3.2e-09 66.6 112 37.5
MSTRG.22949 Avicennia marina HOM05D002368 ORTHO05D002425 4.2e-09 66.2 91 44.0
Dinv34019 Davidia involucrata HOM05D002368 ORTHO05D002425 4.2e-09 66.2 115 46.1
Gohir.A07G058400 Gossypium hirsutum HOM05D002368 ORTHO05D002425 4.2e-09 66.2 109 42.2
Medtr4g110020 Medicago truncatula HOM05D002368 ORTHO05D002425 4.2e-09 66.2 91 42.9
SalBow5G4518 Salvia bowleyana HOM05D002368 ORTHO05D002425 4.2e-09 66.2 104 40.4
Actinidia07766 Actinidia chinensis HOM05D002368 ORTHO05D002425 5.5e-09 65.9 113 38.9
Duzib084G1155 Durio zibethinus HOM05D002368 ORTHO05D002425 5.5e-09 65.9 116 38.8
Lalb_Chr17g0341481 Lupinus albus HOM05D002368 ORTHO05D002425 5.5e-09 65.9 121 43.8
Phvul.003G182000 Phaseolus vulgaris HOM05D002368 ORTHO05D002425 5.5e-09 65.9 117 37.6
Gorai.001G066800 Gossypium raimondii HOM05D002368 ORTHO05D002425 7.2e-09 65.5 104 39.4
Hund09961 Selenicereus undatus HOM05D002368 ORTHO05D002425 7.2e-09 65.5 123 39.8
VMungo1215G0611 Vigna mungo HOM05D002368 ORTHO05D002425 7.2e-09 65.5 120 40.8
FAN13G0050 Fragaria x ananassa HOM05D002368 ORTHO05D002425 9.4e-09 65.1 109 41.3
TWI75G0640 Tripterygium wilfordii HOM05D002368 ORTHO05D002425 9.4e-09 65.1 123 39.0
FvH4_5g13370 Fragaria vesca HOM05D002368 ORTHO05D002425 1.2e-08 64.7 113 42.5
Gohir.D07G063300 Gossypium hirsutum HOM05D002368 ORTHO05D002425 1.2e-08 64.7 104 39.4
SGA_v2.0_scaffold313G48290 Striga asiatica HOM05D002368 ORTHO05D002425 1.2e-08 64.7 103 41.7
Glyma.02G122900 Glycine max HOM05D002368 ORTHO05D002425 1.6e-08 64.3 120 38.3
TAR629G3389 Trochodendron aralioides HOM05D002368 ORTHO05D002425 1.6e-08 64.3 86 40.7
FAN18G1400 Fragaria x ananassa HOM05D002368 ORTHO05D002425 2.1e-08 63.9 106 41.5
AL2G28080 Arabidopsis lyrata HOM05D002368 ORTHO05D002425 2.7e-08 63.5 125 38.4
Hma1.2p1_0428F.1_g150810 Hydrangea macrophylla HOM05D002368 ORTHO05D002425 2.7e-08 63.5 125 41.6
AUR62032140 Chenopodium quinoa HOM05D002368 ORTHO05D002425 3.6e-08 63.2 92 40.2
Ca_21753_v3 Cicer arietinum L. HOM05D002368 ORTHO05D002425 3.6e-08 63.2 109 35.8
Ciclev10032260m.g Citrus clementina HOM05D002368 ORTHO05D002425 3.6e-08 63.2 126 40.5
Dinv17463 Davidia involucrata HOM05D002368 ORTHO05D002425 3.6e-08 63.2 95 38.9
Eucgr.G02420 Eucalyptus grandis HOM05D002368 ORTHO05D002425 3.6e-08 63.2 102 34.3
C02p25710 Brassica napus HOM05D002368 ORTHO05D002425 4.7e-08 62.8 121 38.8
BraA02t06618Z Brassica rapa HOM05D002368 ORTHO05D002425 6.1e-08 62.4 121 38.8
BcaC03g15026 Brassica carinata HOM05D002368 ORTHO05D002425 7.9e-08 62.0 121 38.8
BolC2t08640H Brassica oleracea HOM05D002368 ORTHO05D002425 7.9e-08 62.0 121 38.8
CARHR061900 Cardamine hirsuta HOM05D002368 ORTHO05D002425 1.4e-07 61.2 123 39.0
FvH4_4g29270 Fragaria vesca HOM05D002368 ORTHO05D002425 1.4e-07 61.2 95 41.1
Lj5A137G54 Lonicera japonica HOM05D002368 ORTHO05D002425 1.4e-07 61.2 89 42.7
Duzib248G0233 Durio zibethinus HOM05D002368 ORTHO05D002425 1.8e-07 60.8 119 39.5
FAN17G2469 Fragaria x ananassa HOM05D001549 ORTHO05D003098 1.8e-07 60.8 93 40.9
Pp3c12_14690 Physcomitrium patens HOM05D002368 ORTHO05D002425 1.8e-07 60.8 119 35.3
Aa31sc63G70 Aethionema arabicum HOM05D002368 ORTHO05D002425 2.3e-07 60.5 93 41.9
Thhalv10018843m.g Eutrema salsugineum HOM05D002368 ORTHO05D002425 2.3e-07 60.5 91 37.4
HanXRQChr08g0215611 Helianthus annuus HOM05D002368 ORTHO05D002425 2.3e-07 60.5 116 37.1
SGA_v2.0_scaffold25G10949 Striga asiatica HOM05D002368 ORTHO05D002425 3.0e-07 60.1 104 40.4
Ciclev10024225m.g Citrus clementina HOM05D002368 ORTHO05D002425 3.9e-07 59.7 127 40.2
Mapoly0015s0016 Marchantia polymorpha HOM05D002368 ORTHO05D002425 3.9e-07 59.7 160 35.0
Nitab4.5_0003009g0010 Nicotiana tabacum HOM05D002368 ORTHO05D002425 3.9e-07 59.7 90 41.1
Nitab4.5_0005994g0040 Nicotiana tabacum HOM05D002368 ORTHO05D002425 3.9e-07 59.7 93 38.7
AUR62039666 Chenopodium quinoa HOM05D002368 ORTHO05D002425 6.7e-07 58.9 91 39.6
COL.COLO4_27799 Corchorus olitorius HOM05D001549 ORTHO05D003098 6.7e-07 58.9 88 42.0
MD13G1056300 Malus domestica HOM05D002368 ORTHO05D002425 6.7e-07 58.9 123 40.7
PSO782G2177 Papaver somniferum HOM05D002368 ORTHO05D002425 6.7e-07 58.9 89 36.0
Migut.D01608 Erythranthe guttata HOM05D002368 ORTHO05D002425 8.8e-07 58.5 103 38.8
AagrBONN_evm.TU.Sc2ySwM_117.2978 Anthoceros agrestis HOM05D002368 ORTHO05D002425 1.1e-06 58.2 162 34.6
ECA246G2178 Erigeron canadensis HOM05D002368 ORTHO05D002425 1.1e-06 58.2 111 34.2
FAN08G2550 Fragaria x ananassa HOM05D002368 ORTHO05D002425 1.1e-06 58.2 112 40.2
PGSC0003DMG402002368 Solanum tuberosum HOM05D002368 ORTHO05D002425 1.1e-06 58.2 92 41.3
HanXRQChr03g0066641 Helianthus annuus HOM05D002368 ORTHO05D002425 2.0e-06 57.4 92 38.0
PSO063G3807 Papaver somniferum HOM05D002368 ORTHO05D002425 2.0e-06 57.4 118 32.2
Psat4g045720 Pisum sativum HOM05D002368 ORTHO05D002425 2.0e-06 57.4 107 35.5
RcHm_v2.0_Chr4g0437321 Rosa chinensis HOM05D002368 ORTHO05D002425 2.0e-06 57.4 121 36.4
Sp5g24140 Schrenkiella parvula HOM05D002368 ORTHO05D002425 2.0e-06 57.4 91 36.3
EL10Ac5g11193 Beta vulgaris HOM05D002368 ORTHO05D002425 2.6e-06 57.0 123 38.2
CAN.G982.41 Capsicum annuum HOM05D002368 ORTHO05D002425 2.6e-06 57.0 102 36.3
COL.COLO4_28855 Corchorus olitorius HOM05D002368 ORTHO05D002425 2.6e-06 57.0 116 35.3
DCAR_010176 Daucus carota HOM05D002368 ORTHO05D002425 3.3e-06 56.6 103 37.9
FAN22G0623 Fragaria x ananassa HOM05D002368 ORTHO05D002425 3.3e-06 56.6 121 36.4
PGR119G2372 Punica granatum HOM05D002368 ORTHO05D002425 3.3e-06 56.6 105 36.2
vmacro10472 Vaccinium macrocarpon HOM05D002368 ORTHO05D002425 3.3e-06 56.6 144 33.3
ECA233G0016 Erigeron canadensis HOM05D002368 ORTHO05D002425 4.4e-06 56.2 117 36.8
FAN07G0142 Fragaria x ananassa HOM05D002368 ORTHO05D002425 4.4e-06 56.2 121 36.4
Solyc12g038630.2 Solanum lycopersicum HOM05D002368 ORTHO05D002425 4.4e-06 56.2 92 41.3
Sopen12g018900 Solanum pennellii HOM05D002368 ORTHO05D002425 4.4e-06 56.2 92 41.3
Duzib251G0785 Durio zibethinus HOM05D002368 ORTHO05D002425 5.7e-06 55.8 88 40.9
MBI11_g04276_MAGBIO Magnolia biondii HOM05D002368 ORTHO05D002425 5.7e-06 55.8 95 41.1
Thecc.03G109400 Theobroma cacao HOM05D002368 ORTHO05D002425 5.7e-06 55.8 119 35.3
A02p15570 Brassica napus HOM05D002368 ORTHO05D002425 7.4e-06 55.5 122 36.9
Oeu031935.1 Olea europaea HOM05D002368 ORTHO05D002425 7.4e-06 55.5 107 39.3
Peaxi162Scf00119g00014 Petunia axillaris HOM05D002368 ORTHO05D002425 9.7e-06 55.1 90 38.9


User provided reference genes

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