Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34285 Sequoiadendron giganteum HOM05D000093 ORTHO05D385420 1.3e-48 196.1 100 100.0
SEGI_11295 Sequoiadendron giganteum HOM05D000093 ORTHO05D000814 5.3e-13 77.8 63 61.9
SEGI_09088 Sequoiadendron giganteum HOM05D000093 ORTHO05D000814 2.2e-11 72.4 63 58.7
SEGI_25180 Sequoiadendron giganteum HOM05D000093 ORTHO05D000814 2.1e-09 65.9 64 51.6
Sed0010966 Sechium edule HOM05D000093 ORTHO05D000814 2.3e-08 62.4 63 47.6
FAN27G2440 Fragaria x ananassa HOM05D000093 ORTHO05D000814 3.0e-08 62.0 64 48.4
Manes.10G071600 Manihot esculenta HOM05D000093 ORTHO05D000814 3.0e-08 62.0 65 47.7
FvH4_2g06010 Fragaria vesca HOM05D000093 ORTHO05D000814 1.1e-07 60.1 64 46.9
FAN20G2123 Fragaria x ananassa HOM05D000093 ORTHO05D000814 1.1e-07 60.1 64 46.9
FAN24G2622 Fragaria x ananassa HOM05D000093 ORTHO05D000814 1.1e-07 60.1 64 46.9
ClCG02G005930 Citrullus lanatus HOM05D000093 ORTHO05D000814 1.5e-07 59.7 63 50.8
CsaV3_7G008610 Cucumis sativus L. HOM05D000093 ORTHO05D000814 1.5e-07 59.7 63 49.2
Oeu011537.1 Olea europaea HOM05D000093 ORTHO05D000814 1.9e-07 59.3 64 48.4
RcHm_v2.0_Chr6g0257401 Rosa chinensis HOM05D000093 ORTHO05D000814 2.5e-07 58.9 64 45.3
SalBow6G1495 Salvia bowleyana HOM05D000093 ORTHO05D000814 2.5e-07 58.9 65 47.7
BcaB07g30894 Brassica carinata HOM05D000093 ORTHO05D000814 4.3e-07 58.2 63 49.2
HanXRQChr05g0150861 Helianthus annuus HOM05D000093 ORTHO05D000814 4.3e-07 58.2 65 46.2
Prupe.7G133800 Prunus persica HOM05D000093 ORTHO05D000814 4.3e-07 58.2 84 36.9
PGSC0003DMG400025795 Solanum tuberosum HOM05D000093 ORTHO05D000814 4.3e-07 58.2 65 43.1
GSVIVG01031738001 Vitis vinifera HOM05D000093 ORTHO05D000814 4.3e-07 58.2 64 45.3
Duzib248G1151 Durio zibethinus HOM05D000093 ORTHO05D000814 5.7e-07 57.8 64 45.3
Peaxi162Scf00684g00573 Petunia axillaris HOM05D000093 ORTHO05D000814 5.7e-07 57.8 65 43.1
BcaC06g34445 Brassica carinata HOM05D000093 ORTHO05D000814 7.4e-07 57.4 63 47.6
C07p28390 Brassica napus HOM05D000093 ORTHO05D000814 7.4e-07 57.4 63 47.6
BolC7t43378H Brassica oleracea HOM05D000093 ORTHO05D000814 7.4e-07 57.4 63 47.6
DCAR_020928 Daucus carota HOM05D000093 ORTHO05D000814 7.4e-07 57.4 64 48.4
ECA246G4799 Erigeron canadensis HOM05D000093 ORTHO05D000814 7.4e-07 57.4 65 47.7
Hma1.2p1_0370F.1_g137775 Hydrangea macrophylla HOM05D000093 ORTHO05D000814 7.4e-07 57.4 65 43.1
MBI06_g02555_MAGBIO Magnolia biondii HOM05D000093 ORTHO05D000814 7.4e-07 57.4 64 45.3
Oeu049975.1 Olea europaea HOM05D000093 ORTHO05D000814 7.4e-07 57.4 64 45.3
RcHm_v2.0_Chr2g0105591 Rosa chinensis HOM05D000093 ORTHO05D000814 7.4e-07 57.4 64 45.3
BcaC04g21778 Brassica carinata HOM05D000093 ORTHO05D000814 9.6e-07 57.0 63 47.6
A06p46670 Brassica napus HOM05D000093 ORTHO05D000814 9.6e-07 57.0 63 47.6
A09p21660 Brassica napus HOM05D000093 ORTHO05D000814 9.6e-07 57.0 63 47.6
BolC9t55636H Brassica oleracea HOM05D000093 ORTHO05D000814 9.6e-07 57.0 63 47.6
BraA06t27539Z Brassica rapa HOM05D000093 ORTHO05D000814 9.6e-07 57.0 63 47.6
BraA09t37768Z Brassica rapa HOM05D000093 ORTHO05D000814 9.6e-07 57.0 63 47.6
CAN.G1041.11 Capsicum annuum HOM05D000093 ORTHO05D000814 9.6e-07 57.0 65 44.6
COL.COLO4_32653 Corchorus olitorius HOM05D000093 ORTHO05D000814 9.6e-07 57.0 63 46.0
MELO3C018449.2 Cucumis melo HOM05D000093 ORTHO05D000814 9.6e-07 57.0 63 46.0
MD15G1283400 Malus domestica HOM05D000093 ORTHO05D000814 9.6e-07 57.0 83 37.3
vmacro02205 Vaccinium macrocarpon HOM05D000093 ORTHO05D000814 9.6e-07 57.0 64 43.8
Cc10_g04140 Coffea canephora HOM05D000093 ORTHO05D000814 1.3e-06 56.6 63 46.0
Oeu011555.1 Olea europaea HOM05D000093 ORTHO05D000814 1.3e-06 56.6 64 48.4
SEGI_21573 Sequoiadendron giganteum HOM05D000093 ORTHO05D000814 1.3e-06 56.6 64 46.9
unitig_578.g16534 Utricularia gibba HOM05D000093 ORTHO05D000814 1.3e-06 56.6 64 48.4
Dinv42159 Davidia involucrata HOM05D000093 ORTHO05D000814 1.6e-06 56.2 64 42.2
Manes.07G077900 Manihot esculenta HOM05D000093 ORTHO05D000814 1.6e-06 56.2 65 43.1
QL11p035864 Quercus lobata HOM05D000093 ORTHO05D000814 1.6e-06 56.2 63 47.6
Sc15g0006130 Simmondsia chinensis HOM05D000093 ORTHO05D000814 1.6e-06 56.2 65 46.2
THA.LOC104819469 Tarenaya hassleriana HOM05D000093 ORTHO05D000814 1.6e-06 56.2 71 42.3
vmacro19502 Vaccinium macrocarpon HOM05D000093 ORTHO05D000814 1.6e-06 56.2 64 45.3
Ah.03g145070 Amaranthus hybridus HOM05D000093 ORTHO05D000814 2.1e-06 55.8 64 43.8
CARHR176730 Cardamine hirsuta HOM05D000093 ORTHO05D000814 2.1e-06 55.8 63 46.0
AUR62003877 Chenopodium quinoa HOM05D000001 ORTHO05D000003 2.1e-06 55.8 63 46.0
Ciclev10027226m.g Citrus clementina HOM05D000093 ORTHO05D000814 2.1e-06 55.8 63 42.9
Gohir.D13G039200 Gossypium hirsutum HOM05D000093 ORTHO05D000814 2.1e-06 55.8 63 46.0
HanXRQChr16g0515081 Helianthus annuus HOM05D000093 ORTHO05D000814 2.1e-06 55.8 64 45.3
Prupe.8G125800 Prunus persica HOM05D000093 ORTHO05D000814 2.1e-06 55.8 65 44.6
Sabra09G0077700 Salix brachista HOM05D000093 ORTHO05D000814 2.1e-06 55.8 64 42.2
THA.LOC104798797 Tarenaya hassleriana HOM05D000093 ORTHO05D000814 2.1e-06 55.8 64 43.8
BcaC06g31559 Brassica carinata HOM05D000093 ORTHO05D000814 2.8e-06 55.5 63 46.0
Carub.0008s0277 Capsella rubella HOM05D000093 ORTHO05D000814 2.8e-06 55.5 63 46.0
Gorai.013G044100 Gossypium raimondii HOM05D000093 ORTHO05D000814 2.8e-06 55.5 63 44.4
Potri.014G029100 Populus trichocarpa HOM05D000093 ORTHO05D000814 2.8e-06 55.5 65 44.6
Atru.chr5.2697 Acer truncatum HOM05D000093 ORTHO05D000814 3.7e-06 55.1 65 44.6
MSTRG.16743 Avicennia marina HOM05D000093 ORTHO05D000814 3.7e-06 55.1 65 41.5
Thecc.02G101100 Theobroma cacao HOM05D000093 ORTHO05D000814 3.7e-06 55.1 64 42.2
C09p27710 Brassica napus HOM05D000093 ORTHO05D000814 4.8e-06 54.7 63 46.0
CSS0004890 Camellia sinensis var. sinensis HOM05D000093 ORTHO05D000814 4.8e-06 54.7 65 41.5
Ciclev10028355m.g Citrus clementina HOM05D000093 ORTHO05D000814 4.8e-06 54.7 64 45.3
Dinv29983 Davidia involucrata HOM05D000093 ORTHO05D000814 4.8e-06 54.7 64 40.6
MD05G1081400 Malus domestica HOM05D000093 ORTHO05D000814 4.8e-06 54.7 65 43.1
Manes.13G124800 Manihot esculenta HOM05D000093 ORTHO05D000814 4.8e-06 54.7 64 42.2
Nitab4.5_0000435g0120 Nicotiana tabacum HOM05D000093 ORTHO05D000814 4.8e-06 54.7 64 45.3
Nitab4.5_0005249g0030 Nicotiana tabacum HOM05D000093 ORTHO05D000814 4.8e-06 54.7 65 40.0
Sc15g0006200 Simmondsia chinensis HOM05D000093 ORTHO05D000814 4.8e-06 54.7 65 44.6
Actinidia00439 Actinidia chinensis HOM05D000093 ORTHO05D000814 6.2e-06 54.3 64 43.8
MSTRG.20158 Avicennia marina HOM05D000093 ORTHO05D000814 6.2e-06 54.3 65 40.0
CANSAT25G0812 Cannabis sativa HOM05D000093 ORTHO05D000814 6.2e-06 54.3 64 43.8
CANSAT25G3581 Cannabis sativa HOM05D000093 ORTHO05D000814 6.2e-06 54.3 64 43.8
Cc02_g18810 Coffea canephora HOM05D000093 ORTHO05D000814 6.2e-06 54.3 64 40.6
ECA234G1504 Erigeron canadensis HOM05D000093 ORTHO05D000814 6.2e-06 54.3 64 45.3
Sc02g0007100 Simmondsia chinensis HOM05D000093 ORTHO05D000814 6.2e-06 54.3 65 44.6
Solyc01g108210.4 Solanum lycopersicum HOM05D000093 ORTHO05D000814 6.2e-06 54.3 65 41.5
Sopen01g050440 Solanum pennellii HOM05D000093 ORTHO05D000814 6.2e-06 54.3 65 41.5
SGA_v2.0_scaffold90G27655 Striga asiatica HOM05D000093 ORTHO05D000814 6.2e-06 54.3 65 41.5
Aa31LG8G6060 Aethionema arabicum HOM05D000093 ORTHO05D000814 8.2e-06 53.9 65 46.2
CiPaw.06G172300 Carya illinoinensis HOM05D000093 ORTHO05D000814 8.2e-06 53.9 63 44.4
Thhalv10025059m.g Eutrema salsugineum HOM05D000093 ORTHO05D000814 8.2e-06 53.9 63 46.0
PSO541G3355 Papaver somniferum HOM05D000093 ORTHO05D000814 8.2e-06 53.9 70 42.9
Sp2g10290 Schrenkiella parvula HOM05D000093 ORTHO05D000814 8.2e-06 53.9 63 46.0
SEGI_13302 Sequoiadendron giganteum HOM05D007008 ORTHO05D008622 8.2e-06 53.9 36 72.2
unitig_749.g13841 Utricularia gibba HOM05D000093 ORTHO05D000814 8.2e-06 53.9 64 43.8


User provided reference genes

Program Settings