Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34242 Sequoiadendron giganteum HOM05D004263 ORTHO05D004931 5.5e-72 274.2 142 100.0
Mapoly0011s0120 Marchantia polymorpha HOM05D004263 ORTHO05D004931 6.3e-20 101.3 100 52.0
MSTRG.11470 Avicennia marina HOM05D004263 ORTHO05D004931 5.4e-19 98.2 107 48.6
arahy.Tifrunner.gnm1.ann1.0PC56D Arachis hypogaea HOM05D004263 ORTHO05D004931 7.0e-19 97.8 111 45.9
arahy.Tifrunner.gnm1.ann1.RA2UAB Arachis hypogaea HOM05D004263 ORTHO05D004931 7.0e-19 97.8 111 45.9
Nn2g15850 Nelumbo nucifera HOM05D004263 ORTHO05D004931 2.0e-18 96.3 116 43.1
CiPaw.03G169700 Carya illinoinensis HOM05D004263 ORTHO05D004931 2.7e-18 95.9 117 41.0
Cfa010655 Carpinus fangiana HOM05D004263 ORTHO05D004931 3.5e-18 95.5 117 41.9
SGA_v2.0_scaffold90G27889 Striga asiatica HOM05D004263 ORTHO05D004931 3.5e-18 95.5 100 50.0
TAR627G0082 Trochodendron aralioides HOM05D004263 ORTHO05D004931 3.5e-18 95.5 117 44.4
ATR0737G173 Amborella trichopoda HOM05D004263 ORTHO05D004931 4.5e-18 95.1 106 47.2
Migut.O00120 Erythranthe guttata HOM05D004263 ORTHO05D004931 4.5e-18 95.1 100 48.0
Gohir.A01G015400 Gossypium hirsutum HOM05D004263 ORTHO05D004931 5.9e-18 94.7 113 45.1
Rhsim04G0063000 Rhododendron simsii HOM05D004263 ORTHO05D004931 5.9e-18 94.7 117 41.9
Thhalv10006686m.g Eutrema salsugineum HOM05D004263 ORTHO05D004931 7.7e-18 94.4 102 48.0
Lalb_Chr22g0356351 Lupinus albus HOM05D004263 ORTHO05D004931 7.7e-18 94.4 106 45.3
Manes.12G082900 Manihot esculenta HOM05D004263 ORTHO05D004931 7.7e-18 94.4 113 45.1
Medtr5g026090 Medicago truncatula HOM05D004263 ORTHO05D004931 1.3e-17 93.6 106 49.1
Thecc.02G171500 Theobroma cacao HOM05D004263 ORTHO05D004931 1.3e-17 93.6 117 42.7
vmacro09293 Vaccinium macrocarpon HOM05D004263 ORTHO05D004931 1.3e-17 93.6 98 48.0
CsaV3_7G004120 Cucumis sativus L. HOM05D004263 ORTHO05D004931 2.3e-17 92.8 102 46.1
MBI02_g13236_MAGBIO Magnolia biondii HOM05D004263 ORTHO05D004931 2.3e-17 92.8 87 56.3
Oeu001693.1 Olea europaea HOM05D004263 ORTHO05D004931 2.3e-17 92.8 109 45.9
Oeu001695.1 Olea europaea HOM05D004263 ORTHO05D004931 2.3e-17 92.8 109 45.9
TWI75G0058 Tripterygium wilfordii HOM05D004263 ORTHO05D004931 2.3e-17 92.8 117 43.6
Actinidia39296 Actinidia chinensis HOM05D004263 ORTHO05D004931 3.8e-17 92.0 117 40.2
Hma1.2p1_0565F.1_g179560 Hydrangea macrophylla HOM05D004263 ORTHO05D004931 3.8e-17 92.0 117 41.0
Hma1.2p1_0565F.1_g179570 Hydrangea macrophylla HOM05D004263 ORTHO05D004931 3.8e-17 92.0 117 41.0
Medtr8g063380 Medicago truncatula HOM05D004263 ORTHO05D004931 3.8e-17 92.0 106 48.1
BolC5t29815H Brassica oleracea HOM05D004263 ORTHO05D004931 5.0e-17 91.7 105 44.8
CDE05G0585 Ceratophyllum demersum HOM05D004263 ORTHO05D004931 5.0e-17 91.7 87 56.3
Zm00001eb412950 Zea mays HOM05D004263 ORTHO05D004931 5.0e-17 91.7 92 51.1
A08p32810 Brassica napus HOM05D004263 ORTHO05D004931 6.5e-17 91.3 105 45.7
BraA08t35204Z Brassica rapa HOM05D004263 ORTHO05D004931 6.5e-17 91.3 105 45.7
Duzib248G0991 Durio zibethinus HOM05D004263 ORTHO05D004931 6.5e-17 91.3 121 42.1
Gorai.002G017100 Gossypium raimondii HOM05D004263 ORTHO05D004931 6.5e-17 91.3 113 44.2
A06p09160 Brassica napus HOM05D004263 ORTHO05D004931 8.6e-17 90.9 105 44.8
C05p10740 Brassica napus HOM05D004263 ORTHO05D004931 8.6e-17 90.9 105 44.8
BraA06t24102Z Brassica rapa HOM05D004263 ORTHO05D004931 8.6e-17 90.9 105 44.8
Sp1g11070 Schrenkiella parvula HOM05D004263 ORTHO05D004931 8.6e-17 90.9 105 44.8
BcaB03g13185 Brassica carinata HOM05D004263 ORTHO05D004931 1.1e-16 90.5 105 45.7
BolC8t49173H Brassica oleracea HOM05D004263 ORTHO05D004931 1.1e-16 90.5 105 45.7
CANSAT64G2398 Cannabis sativa HOM05D004263 ORTHO05D004931 1.1e-16 90.5 111 43.2
AUR62034472 Chenopodium quinoa HOM05D004263 ORTHO05D004931 1.1e-16 90.5 102 52.0
Cc04_g12270 Coffea canephora HOM05D004263 ORTHO05D004931 1.1e-16 90.5 106 46.2
Ah.11g047230 Amaranthus hybridus HOM05D004263 ORTHO05D004931 1.5e-16 90.1 105 49.5
C08p15450 Brassica napus HOM05D004263 ORTHO05D004931 1.5e-16 90.1 105 44.8
ECA246G4434 Erigeron canadensis HOM05D004263 ORTHO05D004931 1.5e-16 90.1 117 39.3
Aa31LG1G2150 Aethionema arabicum HOM05D004263 ORTHO05D004931 1.9e-16 89.7 105 46.7
CSS0035062 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 1.9e-16 89.7 117 40.2
Haze_13086 Corylus avellana HOM05D004263 ORTHO05D004931 1.9e-16 89.7 117 40.2
Glyma.12G201100 Glycine max HOM05D004263 ORTHO05D004931 1.9e-16 89.7 117 40.2
Os08g0178100 Oryza sativa ssp. japonica HOM05D004263 ORTHO05D004931 1.9e-16 89.7 87 52.9
Ciclev10014147m.g Citrus clementina HOM05D004263 ORTHO05D004931 3.3e-16 89.0 117 40.2
Gohir.D01G015400 Gossypium hirsutum HOM05D004263 ORTHO05D004931 3.3e-16 89.0 113 44.2
CSS0002238 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 4.2e-16 88.6 117 40.2
CSS0005038 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 4.2e-16 88.6 117 40.2
Cpa.g.sc34.88 Carica papaya HOM05D004263 ORTHO05D004931 4.2e-16 88.6 113 40.7
Ca_01536_v3 Cicer arietinum L. HOM05D004263 ORTHO05D004931 4.2e-16 88.6 106 44.3
ClCG02G001300 Citrullus lanatus HOM05D004263 ORTHO05D004931 4.2e-16 88.6 100 46.0
MD14G1065300 Malus domestica HOM05D004263 ORTHO05D004931 4.2e-16 88.6 116 40.5
PSO801G0468 Papaver somniferum HOM05D004263 ORTHO05D004931 4.2e-16 88.6 103 49.5
Peaxi162Scf00255g01022 Petunia axillaris HOM05D004263 ORTHO05D004931 4.2e-16 88.6 106 45.3
DCAR_009724 Daucus carota HOM05D004263 ORTHO05D004931 5.5e-16 88.2 113 46.9
Lj8C117G6 Lonicera japonica HOM05D004263 ORTHO05D004931 5.5e-16 88.2 98 44.9
RcHm_v2.0_Chr2g0161771 Rosa chinensis HOM05D004263 ORTHO05D004931 5.5e-16 88.2 117 41.0
COL.COLO4_13682 Corchorus olitorius HOM05D004263 ORTHO05D004931 7.2e-16 87.8 113 42.5
Eucgr.K00914 Eucalyptus grandis HOM05D004263 ORTHO05D004931 7.2e-16 87.8 106 42.5
Phvul.005G107700 Phaseolus vulgaris HOM05D004263 ORTHO05D004931 7.2e-16 87.8 107 45.8
QL08p037295 Quercus lobata HOM05D004263 ORTHO05D004931 7.2e-16 87.8 117 41.0
Sed0028127 Sechium edule HOM05D004263 ORTHO05D004931 7.2e-16 87.8 102 47.1
Aqoxy1G01192 Aquilegia oxysepala HOM05D004263 ORTHO05D004931 9.5e-16 87.4 105 43.8
AL1G23830 Arabidopsis lyrata HOM05D004263 ORTHO05D004931 9.5e-16 87.4 102 43.1
Carub.0001s1218 Capsella rubella HOM05D004263 ORTHO05D004931 9.5e-16 87.4 105 42.9
Lj3g0003932 Lotus japonicus HOM05D004263 ORTHO05D004931 9.5e-16 87.4 102 46.1
TPR.G28496 Trifolium pratense HOM05D004086 ORTHO05D004641 9.5e-16 87.4 106 42.5
GSVIVG01030005001 Vitis vinifera HOM05D004263 ORTHO05D004931 9.5e-16 87.4 117 41.9
EL10As1g23122 Beta vulgaris HOM05D004263 ORTHO05D004931 1.2e-15 87.0 106 45.3
FvH4_6g44560 Fragaria vesca HOM05D004263 ORTHO05D004931 1.2e-15 87.0 117 41.0
FAN02G3638 Fragaria x ananassa HOM05D004263 ORTHO05D004931 1.2e-15 87.0 117 41.0
FAN14G1228 Fragaria x ananassa HOM05D004263 ORTHO05D004931 1.2e-15 87.0 117 41.0
PGR142G2990 Punica granatum HOM05D004263 ORTHO05D004931 1.2e-15 87.0 102 48.0
CSS0035503 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 1.6e-15 86.7 100 44.0
Lsat_1_v5_gn_3_39980 Lactuca sativa HOM05D004263 ORTHO05D004931 1.6e-15 86.7 122 38.5
Prupe.3G231000 Prunus persica HOM05D004263 ORTHO05D004931 1.6e-15 86.7 117 39.3
AT1G12470 Arabidopsis thaliana HOM05D004263 ORTHO05D004931 2.1e-15 86.3 105 41.9
HanXRQChr07g0200651 Helianthus annuus HOM05D004263 ORTHO05D004931 2.1e-15 86.3 117 41.0
Lj1C736G5 Lonicera japonica HOM05D004263 ORTHO05D004931 2.1e-15 86.3 117 40.2
CSS0039065 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 2.8e-15 85.9 110 44.5
MD17G1084700 Malus domestica HOM05D004263 ORTHO05D004931 2.8e-15 85.9 116 39.7
PSO339G5244 Papaver somniferum HOM05D004263 ORTHO05D004931 2.8e-15 85.9 88 54.5
Solyc06g005080.4 Solanum lycopersicum HOM05D004263 ORTHO05D004931 2.8e-15 85.9 106 43.4
CAN.G666.1 Capsicum annuum HOM05D004263 ORTHO05D004931 3.6e-15 85.5 88 51.1
FAN09G1275 Fragaria x ananassa HOM05D004263 ORTHO05D004931 3.6e-15 85.5 117 40.2
AUR62041769 Chenopodium quinoa HOM05D004263 ORTHO05D004931 4.7e-15 85.1 106 50.0
Pp3c14_1240 Physcomitrium patens HOM05D004263 ORTHO05D004931 6.1e-15 84.7 105 50.5
Potri.013G147600 Populus trichocarpa HOM05D004263 ORTHO05D004931 6.1e-15 84.7 94 47.9
CARHR012770 Cardamine hirsuta HOM05D004263 ORTHO05D004931 8.0e-15 84.3 105 41.9
Psat2g144400 Pisum sativum HOM05D004263 ORTHO05D004931 1.0e-14 84.0 106 42.5
Nitab4.5_0001514g0020 Nicotiana tabacum HOM05D004263 ORTHO05D004931 1.4e-14 83.6 106 44.3
Sabra13G0119200 Salix brachista HOM05D004263 ORTHO05D004931 1.4e-14 83.6 94 46.8
Glyma.13G301100 Glycine max HOM05D004263 ORTHO05D004931 1.8e-14 83.2 107 44.9
SalBow7G3995 Salvia bowleyana HOM05D004263 ORTHO05D004931 1.8e-14 83.2 111 41.4
Sopen06g001070 Solanum pennellii HOM05D004263 ORTHO05D004931 1.8e-14 83.2 106 43.4
Atru.chr3.3152 Acer truncatum HOM05D004263 ORTHO05D004931 2.3e-14 82.8 106 42.5
CSS0037177 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 4.0e-14 82.0 87 47.1
THA.LOC104809434 Tarenaya hassleriana HOM05D004263 ORTHO05D004931 6.8e-14 81.3 102 45.1
Dinv23716 Davidia involucrata HOM05D004263 ORTHO05D004931 4.4e-13 78.6 112 42.9
Actinidia30490 Actinidia chinensis HOM05D004263 ORTHO05D004931 1.3e-12 77.0 93 44.1
HPP92_004167 Vanilla planifolia HOM05D004263 ORTHO05D004931 3.7e-12 75.5 102 43.1
unitig_0.g1434 Utricularia gibba HOM05D004263 ORTHO05D004931 4.9e-12 75.1 58 56.9
Atru.chr5.268 Acer truncatum HOM05D004263 ORTHO05D004931 8.3e-12 74.3 102 40.2
Haze_03591 Corylus avellana HOM05D004263 ORTHO05D004931 5.0e-09 65.1 90 41.1
SEGI_29711 Sequoiadendron giganteum HOM05D000329 ORTHO05D005330 6.1e-07 58.2 45 64.4


User provided reference genes

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