Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 1.9e-206 722.2 351 100.0
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 2.0e-62 243.8 176 65.9
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 2.8e-61 240.0 189 63.5
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 3.1e-60 236.5 207 58.0
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 4.1e-60 236.1 176 64.8
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 1.5e-59 234.2 187 61.5
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 3.4e-59 233.0 176 61.9
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 5.9e-59 232.3 184 60.9
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 7.7e-59 231.9 186 59.7
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 7.7e-59 231.9 176 62.5
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 1.0e-58 231.5 186 60.2
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 1.7e-58 230.7 188 60.6
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 1.7e-58 230.7 176 61.9
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 1.7e-58 230.7 176 62.5
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 2.2e-58 230.3 176 61.9
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 3.8e-58 229.6 187 59.9
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 5.0e-58 229.2 176 62.5
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 5.0e-58 229.2 183 60.1
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 5.0e-58 229.2 187 59.9
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 6.5e-58 228.8 183 61.2
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 6.5e-58 228.8 176 61.4
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 6.5e-58 228.8 176 61.4
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 8.5e-58 228.4 183 60.7
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 1.4e-57 227.6 176 63.6
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 1.4e-57 227.6 187 59.4
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 1.9e-57 227.3 185 60.0
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 3.2e-57 226.5 186 58.6
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 3.2e-57 226.5 186 59.7
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 4.2e-57 226.1 185 58.4
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 4.2e-57 226.1 176 61.4
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 5.5e-57 225.7 185 59.5
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 9.4e-57 224.9 183 60.7
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 9.4e-57 224.9 183 58.5
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 9.4e-57 224.9 187 58.8
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 1.2e-56 224.6 191 58.6
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 1.2e-56 224.6 192 59.4
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 1.6e-56 224.2 176 62.5
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 2.1e-56 223.8 186 58.1
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 2.1e-56 223.8 176 61.4
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 2.7e-56 223.4 177 58.2
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 3.6e-56 223.0 176 60.8
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 4.7e-56 222.6 183 59.0
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 4.7e-56 222.6 176 60.8
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 6.1e-56 222.2 176 60.2
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 1.0e-55 221.5 177 61.6
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.4e-55 221.1 176 59.7
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 1.4e-55 221.1 186 59.1
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 1.8e-55 220.7 192 55.7
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 2.3e-55 220.3 189 56.1
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 2.3e-55 220.3 178 60.7
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.3e-55 220.3 176 59.7
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 3.0e-55 219.9 176 60.8
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 3.9e-55 219.5 189 56.1
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 3.9e-55 219.5 183 58.5
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 3.9e-55 219.5 179 60.3
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 3.9e-55 219.5 188 59.0
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 5.1e-55 219.2 176 59.1
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 5.1e-55 219.2 176 57.4
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 5.1e-55 219.2 187 58.3
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 6.7e-55 218.8 189 56.6
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 8.8e-55 218.4 181 60.8
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 8.8e-55 218.4 184 59.8
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 8.8e-55 218.4 176 59.1
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 8.8e-55 218.4 188 56.9
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 8.8e-55 218.4 188 57.4
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 1.1e-54 218.0 194 57.2
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 1.5e-54 217.6 188 59.0
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 4.4e-54 216.1 179 58.1
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 4.4e-54 216.1 192 55.2
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 5.7e-54 215.7 178 60.1
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 5.7e-54 215.7 186 57.5
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 9.7e-54 214.9 176 58.5
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.3e-53 214.5 176 59.1
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 2.8e-53 213.4 176 58.5
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 6.3e-53 212.2 172 58.7
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 8.2e-53 211.8 190 58.4
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 8.2e-53 211.8 190 57.9
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 2.4e-52 210.3 176 61.4
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 2.4e-52 210.3 176 60.2
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 3.1e-52 209.9 179 57.5
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 4.1e-52 209.5 181 56.9
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 1.5e-51 207.6 176 59.7
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.0e-51 207.2 176 57.4
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 7.7e-51 205.3 154 63.0
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 7.7e-51 205.3 154 63.0
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 1.7e-50 204.1 186 53.8
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 2.2e-50 203.8 167 59.9
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 3.8e-50 203.0 158 61.4
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 1.1e-49 201.4 182 56.0
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 1.1e-49 201.4 179 55.9
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 1.5e-49 201.1 188 54.8
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 4.2e-49 199.5 180 56.1
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 4.2e-49 199.5 180 56.1
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 4.2e-49 199.5 180 56.1
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 7.2e-49 198.7 186 54.3
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 2.1e-48 197.2 182 54.9
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 2.1e-48 197.2 182 54.9
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 2.1e-48 197.2 182 54.9
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.7e-48 196.8 189 54.5
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 1.4e-47 194.5 188 54.3
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 1.4e-47 194.5 176 51.7
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 1.8e-47 194.1 182 54.9
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 1.8e-47 194.1 154 61.0
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 6.7e-47 192.2 178 54.5
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 1.5e-46 191.0 219 48.4
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 1.5e-46 191.0 154 61.0
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 1.5e-46 191.0 158 58.2
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 2.0e-46 190.7 177 54.8
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 1.7e-42 177.6 164 55.5
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 6.5e-42 175.6 181 51.4
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 1.1e-41 174.9 187 49.7
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 3.6e-40 169.9 176 50.6
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 5.2e-39 166.0 128 60.9
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 1.5e-38 164.5 193 50.3
SEGI_05279 Sequoiadendron giganteum HOM05D001060 ORTHO05D000905 1.1e-33 148.3 95 80.0
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 6.3e-29 132.5 101 58.4
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 3.5e-27 126.7 100 61.0
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 1.7e-26 124.4 213 39.0
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 2.6e-22 110.5 83 60.2
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 4.9e-21 106.3 158 39.9
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 4.3e-17 93.2 84 54.8
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 4.1e-12 76.6 193 29.5
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 4.6e-11 73.2 47 68.1
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 6.6e-10 69.3 63 54.0
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 3.6e-08 63.5 173 29.5
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 8.1e-08 62.4 50 58.0
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 1.8e-07 61.2 166 28.9


User provided reference genes

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