Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34213 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 8.5e-125 450.3 218 100.0
SEGI_16419 Sequoiadendron giganteum HOM05D001986 ORTHO05D002283 1.3e-51 207.2 180 62.8
SEGI_36162 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 6.5e-48 194.9 166 65.7
SEGI_34581 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 1.4e-47 193.7 143 69.9
SEGI_04127 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 1.6e-46 190.3 157 66.2
SEGI_01694 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 1.1e-42 177.6 111 80.2
SEGI_17436 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 2.4e-42 176.4 159 64.8
SEGI_30807 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 4.1e-42 175.6 159 64.8
SEGI_40792 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 5.9e-41 171.8 111 78.4
SEGI_09150 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 4.2e-39 165.6 108 76.9
SEGI_33962 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 7.2e-39 164.9 108 76.9
SEGI_07702 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 2.1e-38 163.3 106 81.1
SEGI_39102 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 1.5e-36 157.1 102 76.5
SEGI_30647 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 4.8e-35 152.1 99 78.8
SEGI_13198 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 3.4e-33 146.0 104 72.1
SEGI_01355 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 5.9e-33 145.2 139 62.6
SEGI_03565 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 6.1e-30 135.2 111 64.9
SEGI_34626 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 1.0e-29 134.4 80 85.0
SEGI_31988 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 6.5e-24 115.2 72 81.9
SEGI_01558 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 2.7e-22 109.8 66 81.8
SEGI_39023 Sequoiadendron giganteum HOM05D001986 ORTHO05D002283 1.3e-19 100.9 189 39.2
CDE04G2724 Ceratophyllum demersum HOM05D001986 ORTHO05D009285 1.0e-13 81.3 82 51.2
Rhsim13G0071200 Rhododendron simsii HOM05D001986 ORTHO05D002283 1.0e-13 81.3 180 32.8
Pp3c17_17300 Physcomitrium patens HOM05D001986 ORTHO05D012227 1.2e-12 77.8 72 55.6
CDE03G0210 Ceratophyllum demersum HOM05D001986 ORTHO05D002283 1.5e-12 77.4 84 46.4
FAN10G4253 Fragaria x ananassa HOM05D001986 ORTHO05D002283 1.5e-12 77.4 142 32.4
Mapoly0026s0001 Marchantia polymorpha HOM05D001986 ORTHO05D002283 4.4e-12 75.9 99 44.4
FAN03G1061 Fragaria x ananassa HOM05D001986 ORTHO05D002283 5.7e-12 75.5 92 42.4
FAN06G0884 Fragaria x ananassa HOM05D001986 ORTHO05D002283 7.5e-12 75.1 92 42.4
Aqoxy4G02635 Aquilegia oxysepala HOM05D001986 ORTHO05D002283 9.7e-12 74.7 161 33.5
FvH4_7g24140 Fragaria vesca HOM05D001986 ORTHO05D002283 1.3e-11 74.3 92 42.4
MSTRG.8318 Avicennia marina HOM05D001986 ORTHO05D002283 1.7e-11 73.9 140 35.7
CSS0017587 Camellia sinensis var. sinensis HOM05D001986 ORTHO05D002283 2.2e-11 73.6 71 52.1
THA.LOC104810716 Tarenaya hassleriana HOM05D001986 ORTHO05D002283 4.8e-11 72.4 91 40.7
Eucgr.J01926 Eucalyptus grandis HOM05D001986 ORTHO05D012227 6.3e-11 72.0 87 47.1
Nn2g11423 Nelumbo nucifera HOM05D001986 ORTHO05D002283 6.3e-11 72.0 80 45.0
RcHm_v2.0_Chr1g0369571 Rosa chinensis HOM05D001986 ORTHO05D002283 6.3e-11 72.0 92 40.2
Dinv20978 Davidia involucrata HOM05D001986 ORTHO05D002283 8.2e-11 71.6 72 51.4
Lj6g0026845 Lotus japonicus HOM05D001986 ORTHO05D002283 1.4e-10 70.9 82 45.1
MD01G1148600 Malus domestica HOM05D001986 ORTHO05D002283 1.4e-10 70.9 92 39.1
Pp3c14_15450 Physcomitrium patens HOM05D001986 ORTHO05D002283 1.4e-10 70.9 71 52.1
TAR623G0550 Trochodendron aralioides HOM05D001986 ORTHO05D002283 1.8e-10 70.5 74 48.6
TAR623G0633 Trochodendron aralioides HOM05D001986 ORTHO05D002283 1.8e-10 70.5 74 48.6
Atru.chr12.3 Acer truncatum HOM05D001986 ORTHO05D002283 3.1e-10 69.7 75 46.7
CANSAT54G2602 Cannabis sativa HOM05D001986 ORTHO05D002283 3.1e-10 69.7 83 42.2
Dinv34413 Davidia involucrata HOM05D001986 ORTHO05D002283 3.1e-10 69.7 67 52.2
MD07G1215600 Malus domestica HOM05D001986 ORTHO05D002283 3.1e-10 69.7 79 44.3
PSO801G0225 Papaver somniferum HOM05D001986 ORTHO05D002283 4.1e-10 69.3 96 41.7
TWI53G0575 Tripterygium wilfordii HOM05D001986 ORTHO05D002283 4.1e-10 69.3 68 45.6
FAN01G0590 Fragaria x ananassa HOM05D001986 ORTHO05D012227 5.3e-10 68.9 120 33.3
CiPaw.02G190800 Carya illinoinensis HOM05D001986 ORTHO05D002283 7.0e-10 68.6 83 42.2
GSVIVG01032859001 Vitis vinifera HOM05D001986 ORTHO05D002283 7.0e-10 68.6 81 45.7
CsaV3_6G016330 Cucumis sativus L. HOM05D001986 ORTHO05D002283 1.2e-09 67.8 79 46.8
PSO339G2754 Papaver somniferum HOM05D001986 ORTHO05D002283 1.2e-09 67.8 96 40.6
SEGI_26707 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 1.2e-09 67.8 38 84.2
Prupe.2G247500 Prunus persica HOM05D001986 ORTHO05D002283 2.7e-09 66.6 77 42.9
TWI09G0091 Tripterygium wilfordii HOM05D001986 ORTHO05D002283 2.7e-09 66.6 71 45.1
ATR0618G436 Amborella trichopoda HOM05D001986 ORTHO05D002283 3.5e-09 66.2 67 52.2
CANSAT56G3655 Cannabis sativa HOM05D001986 ORTHO05D002283 3.5e-09 66.2 80 45.0
SEGI_16305 Sequoiadendron giganteum HOM05D001986 ORTHO05D012227 3.5e-09 66.2 43 79.1
Haze_17195 Corylus avellana HOM05D001986 ORTHO05D002283 4.5e-09 65.9 154 31.8
AUR62001672 Chenopodium quinoa HOM05D001986 ORTHO05D002283 7.7e-09 65.1 67 47.8
Manes.02G120700 Manihot esculenta HOM05D001986 ORTHO05D002283 7.7e-09 65.1 63 49.2
QL01p037599 Quercus lobata HOM05D001986 ORTHO05D002283 7.7e-09 65.1 166 33.1
Cpa.g.sc19.205 Carica papaya HOM05D001986 ORTHO05D002283 1.0e-08 64.7 74 41.9
Pp3c1_4470 Physcomitrium patens HOM05D001986 ORTHO05D002283 1.0e-08 64.7 78 43.6
MELO3C025863.2 Cucumis melo HOM05D001986 ORTHO05D002283 1.3e-08 64.3 66 51.5
Migut.N00811 Erythranthe guttata HOM05D001986 ORTHO05D002283 1.3e-08 64.3 152 29.6
TAR633G0772 Trochodendron aralioides HOM05D001986 ORTHO05D002283 1.3e-08 64.3 168 29.8
Oeu032748.1 Olea europaea HOM05D001986 ORTHO05D002283 1.7e-08 63.9 59 54.2
Oeu032750.1 Olea europaea HOM05D001986 ORTHO05D002283 1.7e-08 63.9 59 54.2
Dinv21027 Davidia involucrata HOM05D001986 ORTHO05D002283 2.2e-08 63.5 65 49.2
Manes.07G126800 Manihot esculenta HOM05D001986 ORTHO05D002283 2.2e-08 63.5 76 44.7
Manes.10G016300 Manihot esculenta HOM05D001986 ORTHO05D002283 2.2e-08 63.5 84 44.0
vmacro14587 Vaccinium macrocarpon HOM05D001986 ORTHO05D002283 2.2e-08 63.5 67 44.8
Cc02_g06800 Coffea canephora HOM05D001986 ORTHO05D002283 2.9e-08 63.2 67 49.3
Lsat_1_v5_gn_5_171460 Lactuca sativa HOM05D001986 ORTHO05D002283 2.9e-08 63.2 83 39.8
Manes.01G163200 Manihot esculenta HOM05D001986 ORTHO05D002283 2.9e-08 63.2 59 50.8
PSO541G1876 Papaver somniferum HOM05D001986 ORTHO05D002283 2.9e-08 63.2 72 47.2
Peaxi162Scf00957g00226 Petunia axillaris HOM05D001986 ORTHO05D002283 2.9e-08 63.2 109 35.8
Sc12g0000940 Simmondsia chinensis HOM05D001986 ORTHO05D002283 3.8e-08 62.8 66 47.0
Duzib114G0515 Durio zibethinus HOM05D001986 ORTHO05D002283 5.0e-08 62.4 70 48.6
Gohir.A06G164250 Gossypium hirsutum HOM05D001986 ORTHO05D002283 5.0e-08 62.4 81 42.0
SMO116G0286 Selaginella moellendorffii HOM05D001986 ORTHO05D002283 5.0e-08 62.4 54 53.7
AagrBONN_evm.TU.Sc2ySwM_344.3460 Anthoceros agrestis HOM05D001986 ORTHO05D002283 6.5e-08 62.0 103 37.9
DCAR_011796 Daucus carota HOM05D001986 ORTHO05D002283 6.5e-08 62.0 150 34.7
HanXRQChr01g0011391 Helianthus annuus HOM05D001986 ORTHO05D002283 6.5e-08 62.0 93 35.5
Rhsim01G0235800 Rhododendron simsii HOM05D001986 ORTHO05D002283 6.5e-08 62.0 78 43.6
TWI75G1654 Tripterygium wilfordii HOM05D001986 ORTHO05D002283 6.5e-08 62.0 70 42.9
Duzib150G0302 Durio zibethinus HOM05D001986 ORTHO05D002283 8.5e-08 61.6 78 41.0
PSO339G3837 Papaver somniferum HOM05D001986 ORTHO05D002283 8.5e-08 61.6 83 41.0
TPR.G21163 Trifolium pratense HOM05D001986 ORTHO05D002283 8.5e-08 61.6 71 43.7
Gohir.A06G178600 Gossypium hirsutum HOM05D001986 ORTHO05D002283 1.1e-07 61.2 65 46.2
Gorai.003G123600 Gossypium raimondii HOM05D001986 ORTHO05D002283 1.1e-07 61.2 145 35.2
HanXRQChr05g0135741 Helianthus annuus HOM05D001986 ORTHO05D002283 1.1e-07 61.2 82 36.6
Sabra09G0031700 Salix brachista HOM05D001986 ORTHO05D002283 1.1e-07 61.2 59 49.2
Sabra10G0147400 Salix brachista HOM05D001986 ORTHO05D002283 1.1e-07 61.2 67 49.3
Solyc06g076850.3 Solanum lycopersicum HOM05D001986 ORTHO05D002283 1.1e-07 61.2 147 31.3
Sopen06g033240 Solanum pennellii HOM05D001986 ORTHO05D002283 1.1e-07 61.2 147 31.3
PGSC0003DMG400030441 Solanum tuberosum HOM05D001986 ORTHO05D002283 1.1e-07 61.2 150 32.7
TAR369G0464 Trochodendron aralioides HOM05D001986 ORTHO05D002283 1.1e-07 61.2 59 49.2
TAR369G0921 Trochodendron aralioides HOM05D001986 ORTHO05D002283 1.1e-07 61.2 59 49.2
CSS0009497 Camellia sinensis var. sinensis HOM05D001986 ORTHO05D002283 1.5e-07 60.8 59 50.8
CSS0017469 Camellia sinensis var. sinensis HOM05D001986 ORTHO05D002283 1.5e-07 60.8 59 50.8
CARHR007000 Cardamine hirsuta HOM05D001986 ORTHO05D002283 1.5e-07 60.8 70 44.3
CDE02G2111 Ceratophyllum demersum HOM05D001986 ORTHO05D002283 1.5e-07 60.8 133 30.8
Gohir.A03G050200 Gossypium hirsutum HOM05D001986 ORTHO05D002283 1.5e-07 60.8 145 35.2
PSO675G5806 Papaver somniferum HOM05D001986 ORTHO05D002283 1.5e-07 60.8 71 45.1
AL5G26320 Arabidopsis lyrata HOM05D001986 ORTHO05D002283 1.9e-07 60.5 89 36.0
AT3G47080 Arabidopsis thaliana HOM05D001986 ORTHO05D002283 1.9e-07 60.5 89 38.2
ClCG02G019650 Citrullus lanatus HOM05D001986 ORTHO05D002283 1.9e-07 60.5 65 47.7
unitig_60.g25680 Utricularia gibba HOM05D001986 ORTHO05D002283 1.9e-07 60.5 76 42.1
unitig_8.g3688 Utricularia gibba HOM05D001986 ORTHO05D002283 1.9e-07 60.5 85 35.3
MBI14_g09431_MAGBIO Magnolia biondii HOM05D001986 ORTHO05D002283 3.2e-07 59.7 67 46.3
Nn2g13657 Nelumbo nucifera HOM05D001986 ORTHO05D002283 3.2e-07 59.7 79 40.5
Ca_05945_v3 Cicer arietinum L. HOM05D001986 ORTHO05D002283 4.2e-07 59.3 77 41.6
Gohir.D03G117200 Gossypium hirsutum HOM05D001986 ORTHO05D002283 5.5e-07 58.9 145 34.5
Lj1A952T45 Lonicera japonica HOM05D001986 ORTHO05D002283 5.5e-07 58.9 122 32.8
Medtr3g463450 Medicago truncatula HOM05D001986 ORTHO05D002283 5.5e-07 58.9 67 43.3
Oeu055848.1 Olea europaea HOM05D001986 ORTHO05D002283 5.5e-07 58.9 59 52.5
PSO384G1838 Papaver somniferum HOM05D001986 ORTHO05D002283 5.5e-07 58.9 71 43.7
Potri.001G250100 Populus trichocarpa HOM05D001986 ORTHO05D002283 5.5e-07 58.9 71 40.8
Ciclev10028157m.g Citrus clementina HOM05D001986 ORTHO05D002283 7.2e-07 58.5 78 37.2
Gorai.010G204100 Gossypium raimondii HOM05D001986 ORTHO05D002283 7.2e-07 58.5 92 39.1
MD11G1078900 Malus domestica HOM05D001986 ORTHO05D002283 7.2e-07 58.5 62 46.8
Sed0020893 Sechium edule HOM05D001986 ORTHO05D002283 7.2e-07 58.5 70 44.3
Phvul.008G225600 Phaseolus vulgaris HOM05D001986 ORTHO05D002283 9.4e-07 58.2 74 45.9
VMungo0540G1538 Vigna mungo HOM05D001986 ORTHO05D002283 9.4e-07 58.2 181 30.9
Ciclev10031175m.g Citrus clementina HOM05D001986 ORTHO05D002283 1.2e-06 57.8 59 49.2
Gohir.D06G174450 Gossypium hirsutum HOM05D001986 ORTHO05D002283 1.2e-06 57.8 65 46.2
HanXRQChr08g0229551 Helianthus annuus HOM05D001986 ORTHO05D002283 1.2e-06 57.8 178 28.1
Prupe.6G059600 Prunus persica HOM05D001986 ORTHO05D002283 1.2e-06 57.8 141 32.6
Sed0017568 Sechium edule HOM05D001986 ORTHO05D002283 1.2e-06 57.8 182 30.8
SEGI_17237 Sequoiadendron giganteum HOM05D001986 ORTHO05D002283 1.2e-06 57.8 60 51.7
FAN16G2422 Fragaria x ananassa HOM05D001986 ORTHO05D002283 1.6e-06 57.4 73 42.5
Lj6g0026977 Lotus japonicus HOM05D001986 ORTHO05D002283 1.6e-06 57.4 75 45.3
Lalb_Chr18g0052691 Lupinus albus HOM05D001986 ORTHO05D002283 1.6e-06 57.4 80 42.5
CDE02G4044 Ceratophyllum demersum HOM05D001986 ORTHO05D002283 2.1e-06 57.0 65 47.7
Migut.F01415 Erythranthe guttata HOM05D001986 ORTHO05D002283 2.1e-06 57.0 81 39.5
Glyma.02G255200 Glycine max HOM05D001986 ORTHO05D002283 2.1e-06 57.0 74 47.3
Glyma.14G061300 Glycine max HOM05D001986 ORTHO05D002283 2.1e-06 57.0 74 47.3
Potri.010G191600 Populus trichocarpa HOM05D001986 ORTHO05D002283 2.1e-06 57.0 62 48.4
Ah.10g036470 Amaranthus hybridus HOM05D001986 ORTHO05D002283 2.7e-06 56.6 90 36.7
AL4G24440 Arabidopsis lyrata HOM05D001986 ORTHO05D002283 2.7e-06 56.6 71 40.8
AT2G29670 Arabidopsis thaliana HOM05D001986 ORTHO05D002283 2.7e-06 56.6 124 29.8
arahy.Tifrunner.gnm1.ann1.R531TT Arachis hypogaea HOM05D001986 ORTHO05D002283 2.7e-06 56.6 75 40.0
CDE04G2474 Ceratophyllum demersum HOM05D001986 ORTHO05D002283 2.7e-06 56.6 134 30.6
Ca_14921_v3 Cicer arietinum L. HOM05D001986 ORTHO05D002283 2.7e-06 56.6 62 45.2
DCAR_025675 Daucus carota HOM05D001986 ORTHO05D002283 2.7e-06 56.6 71 39.4
Glyma.08G333700 Glycine max HOM05D001986 ORTHO05D002283 2.7e-06 56.6 65 46.2
GSVIVG01024773001 Vitis vinifera HOM05D001986 ORTHO05D002283 2.7e-06 56.6 71 39.4
Cpa.g.sc112.43 Carica papaya HOM05D001986 ORTHO05D002283 3.6e-06 56.2 71 39.4
Haze_24272 Corylus avellana HOM05D001986 ORTHO05D002283 3.6e-06 56.2 156 32.1
Dinv28626 Davidia involucrata HOM05D001986 ORTHO05D002283 3.6e-06 56.2 60 48.3
Psat5g160280 Pisum sativum HOM05D001986 ORTHO05D002283 3.6e-06 56.2 91 35.2
Potri.009G044200 Populus trichocarpa HOM05D001986 ORTHO05D002283 3.6e-06 56.2 62 45.2
SMO367G1125 Selaginella moellendorffii HOM05D001986 ORTHO05D024961 3.6e-06 56.2 56 53.6
Sc21g0006260 Simmondsia chinensis HOM05D001986 ORTHO05D002283 3.6e-06 56.2 64 46.9
VMungo0647G0100 Vigna mungo HOM05D001986 ORTHO05D002283 3.6e-06 56.2 74 45.9
BcaC07g42456 Brassica carinata HOM05D001986 ORTHO05D002283 4.7e-06 55.8 158 30.4
Hma1.2p1_0227F.1_g096400 Hydrangea macrophylla HOM05D001986 ORTHO05D002283 4.7e-06 55.8 183 24.6
Carub.0001s0658 Capsella rubella HOM05D001986 ORTHO05D002283 6.1e-06 55.5 59 44.1
Duzib168G1084 Durio zibethinus HOM05D001986 ORTHO05D002283 6.1e-06 55.5 67 41.8
VMungo0647G0237 Vigna mungo HOM05D001986 ORTHO05D020884 6.1e-06 55.5 68 41.2
AL1G17430 Arabidopsis lyrata HOM05D001986 ORTHO05D002283 8.0e-06 55.1 77 42.9
arahy.Tifrunner.gnm1.ann1.LF558K Arachis hypogaea HOM05D001986 ORTHO05D002283 8.0e-06 55.1 75 38.7
CiPaw.13G079900 Carya illinoinensis HOM05D001986 ORTHO05D002283 8.0e-06 55.1 75 40.0
Thhalv10007265m.g Eutrema salsugineum HOM05D001986 ORTHO05D002283 8.0e-06 55.1 90 37.8
FAN11G2938 Fragaria x ananassa HOM05D001986 ORTHO05D002283 8.0e-06 55.1 73 41.1
FAN25G2662 Fragaria x ananassa HOM05D001986 ORTHO05D002283 8.0e-06 55.1 73 41.1
Hma1.2p1_1010F.1_g247330 Hydrangea macrophylla HOM05D001986 ORTHO05D002283 8.0e-06 55.1 78 39.7
Phvul.006G064500 Phaseolus vulgaris HOM05D001986 ORTHO05D002283 8.0e-06 55.1 62 45.2
RcHm_v2.0_Chr5g0068901 Rosa chinensis HOM05D001986 ORTHO05D002283 8.0e-06 55.1 59 45.8


User provided reference genes

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