Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34192 Sequoiadendron giganteum HOM05D035901 ORTHO05D007661 0.0e+00 1310.8 682 100.0
SEGI_17426 Sequoiadendron giganteum HOM05D007561 ORTHO05D007661 6.4e-118 429.1 635 45.8
SEGI_25893 Sequoiadendron giganteum HOM05D035901 ORTHO05D007661 9.3e-93 345.5 531 44.4
SEGI_32896 Sequoiadendron giganteum HOM05D000006 ORTHO05D007661 4.9e-86 323.2 603 42.5
PSO675G2416 Papaver somniferum HOM05D007561 ORTHO05D007661 3.0e-19 101.3 599 26.7
PSO732G0159 Papaver somniferum HOM05D007561 ORTHO05D007661 3.0e-19 101.3 593 26.8
Manes.04G066400 Manihot esculenta HOM05D007561 ORTHO05D007661 4.0e-19 100.9 528 27.5
Aqoxy2G00670 Aquilegia oxysepala HOM05D007561 ORTHO05D007661 1.2e-18 99.4 566 26.9
ATR0068G026 Amborella trichopoda HOM05D007561 ORTHO05D007661 2.0e-18 98.6 572 26.4
TWI77G0394 Tripterygium wilfordii HOM05D007561 ORTHO05D007661 4.1e-16 90.9 521 27.3
TAR561G0001 Trochodendron aralioides HOM05D007561 ORTHO05D007661 4.1e-16 90.9 509 26.9
HPP92_021156 Vanilla planifolia HOM05D007561 ORTHO05D007661 3.5e-15 87.8 549 25.7
Potri.007G074056 Populus trichocarpa HOM05D007561 ORTHO05D007661 5.9e-15 87.0 552 25.7
Ciclev10013885m.g Citrus clementina HOM05D007561 ORTHO05D007661 2.9e-14 84.7 480 26.0
Oeu020265.1 Olea europaea HOM05D007561 ORTHO05D007661 1.5e-13 82.4 570 25.8
PSO339G6289 Papaver somniferum HOM05D007561 ORTHO05D007661 1.5e-13 82.4 545 26.2
Nitab4.5_0000613g0170 Nicotiana tabacum HOM05D007561 ORTHO05D007661 1.9e-13 82.0 528 25.9
TWI74G0078 Tripterygium wilfordii HOM05D007561 ORTHO05D007661 3.3e-13 81.3 486 26.3
MD16G1073600 Malus domestica HOM05D002654 ORTHO05D002430 4.3e-13 80.9 629 25.4
Potri.005G090000 Populus trichocarpa HOM05D007561 ORTHO05D007661 9.5e-13 79.7 539 26.0
Sabra05G0074100 Salix brachista HOM05D007561 ORTHO05D007661 9.5e-13 79.7 534 25.1
PSO384G3070 Papaver somniferum HOM05D007561 ORTHO05D007661 1.2e-12 79.3 583 25.2
Nitab4.5_0000811g0050 Nicotiana tabacum HOM05D007561 ORTHO05D007661 2.1e-12 78.6 543 26.0
SalBow6G1989 Salvia bowleyana HOM05D007561 ORTHO05D007661 4.0e-11 74.3 539 24.7
SalBow6G6384 Salvia bowleyana HOM05D007561 ORTHO05D007661 5.2e-11 73.9 551 24.5
Dinv37052 Davidia involucrata HOM05D007561 ORTHO05D007661 6.8e-11 73.6 554 25.6
DCAR_009109 Daucus carota HOM05D007561 ORTHO05D007661 1.2e-10 72.8 538 25.8
Sabra07G0062300 Salix brachista HOM05D007561 ORTHO05D007661 1.2e-10 72.8 485 26.8
TPR.G37132 Trifolium pratense HOM05D002654 ORTHO05D002430 5.7e-10 70.5 271 28.8
TAR371G1053 Trochodendron aralioides HOM05D002654 ORTHO05D002430 5.7e-10 70.5 555 24.9
CAN.G128.129 Capsicum annuum HOM05D007561 ORTHO05D007661 1.7e-09 68.9 527 25.0
Cpa.g.sc33.185 Carica papaya HOM05D007561 ORTHO05D007661 2.2e-09 68.6 481 27.7
TAR629G0269 Trochodendron aralioides HOM05D002654 ORTHO05D002430 2.9e-09 68.2 529 25.3
Lalb_Chr17g0340621 Lupinus albus HOM05D002654 ORTHO05D002430 3.7e-09 67.8 524 24.4
PGSC0003DMG400028120 Solanum tuberosum HOM05D007561 ORTHO05D007661 3.7e-09 67.8 517 24.2
MSTRG.19744 Avicennia marina HOM05D007561 ORTHO05D007661 4.9e-09 67.4 460 25.2
Migut.J01597 Erythranthe guttata HOM05D007561 ORTHO05D007661 6.4e-09 67.0 544 23.7
Solyc10g081340.1 Solanum lycopersicum HOM05D007561 ORTHO05D007661 6.4e-09 67.0 521 24.4
Sopen10g031840 Solanum pennellii HOM05D007561 ORTHO05D007661 1.1e-08 66.2 519 24.1
Prupe.7G023100 Prunus persica HOM05D007561 ORTHO05D007661 1.4e-08 65.9 183 29.5
RhsimUnG0021900 Rhododendron simsii HOM05D007561 ORTHO05D007661 1.4e-08 65.9 505 25.3
Cfa008990 Carpinus fangiana HOM05D002654 ORTHO05D002430 2.4e-08 65.1 408 27.5
ClCG10G016860 Citrullus lanatus HOM05D007561 ORTHO05D007661 3.2e-08 64.7 562 24.9
Actinidia18379 Actinidia chinensis HOM05D007561 ORTHO05D007661 9.2e-08 63.2 148 33.1
CiPaw.05G136200 Carya illinoinensis HOM05D002654 ORTHO05D002430 1.2e-07 62.8 264 28.0
Glyma.01G046600 Glycine max HOM05D002654 ORTHO05D002430 1.2e-07 62.8 544 23.9
Gorai.005G141100 Gossypium raimondii HOM05D002654 ORTHO05D002430 1.2e-07 62.8 248 28.6
MBI02_g39064_MAGBIO Magnolia biondii HOM05D002654 ORTHO05D002430 1.2e-07 62.8 488 25.4
COL.COLO4_23006 Corchorus olitorius HOM05D002654 ORTHO05D002430 2.0e-07 62.0 250 30.8
Nitab4.5_0000703g0220 Nicotiana tabacum HOM05D002654 ORTHO05D002430 2.0e-07 62.0 171 30.4
CsaV3_3G039500 Cucumis sativus L. HOM05D007561 ORTHO05D007661 2.7e-07 61.6 576 23.8
RcHm_v2.0_Chr4g0439931 Rosa chinensis HOM05D002654 ORTHO05D002430 3.5e-07 61.2 540 21.9
Duzib251G0139 Durio zibethinus HOM05D002654 ORTHO05D002430 4.6e-07 60.8 262 30.2
FAN12G2197 Fragaria x ananassa HOM05D007561 ORTHO05D007661 4.6e-07 60.8 583 24.4
Prupe.1G273300 Prunus persica HOM05D002654 ORTHO05D002430 4.6e-07 60.8 528 24.1
Thecc.02G347200 Theobroma cacao HOM05D002654 ORTHO05D002430 4.6e-07 60.8 256 30.9
VMungo1215G1652 Vigna mungo HOM05D002654 ORTHO05D002430 4.6e-07 60.8 543 22.7
Dinv38698 Davidia involucrata HOM05D002654 ORTHO05D002430 5.9e-07 60.5 519 24.9
RcHm_v2.0_Chr3g0495011 Rosa chinensis HOM05D007561 ORTHO05D007661 5.9e-07 60.5 552 24.6
Gohir.D02G125400 Gossypium hirsutum HOM05D002654 ORTHO05D002430 7.8e-07 60.1 249 28.1
Lj2g0004439 Lotus japonicus HOM05D002654 ORTHO05D002430 7.8e-07 60.1 550 22.9
Sed0024594 Sechium edule HOM05D007561 ORTHO05D007661 7.8e-07 60.1 566 24.4
FvH4_4g10470 Fragaria vesca HOM05D007561 ORTHO05D007661 1.3e-06 59.3 582 23.5
Gohir.A03G098250 Gossypium hirsutum HOM05D002654 ORTHO05D002430 1.3e-06 59.3 249 28.1
Gohir.A12G105550 Gossypium hirsutum HOM05D002654 ORTHO05D002430 1.3e-06 59.3 249 28.1
CAN.G58.27 Capsicum annuum HOM05D002654 ORTHO05D002430 1.7e-06 58.9 531 24.5
Lj2A414T29 Lonicera japonica HOM05D007561 ORTHO05D007661 1.7e-06 58.9 484 25.4
Lalb_Chr10g0098231 Lupinus albus HOM05D002654 ORTHO05D002430 1.7e-06 58.9 523 24.9
Gorai.012G026500 Gossypium raimondii HOM05D007561 ORTHO05D007661 2.3e-06 58.5 544 23.9
Manes.05G100700 Manihot esculenta HOM05D002654 ORTHO05D002430 2.3e-06 58.5 516 26.0
VMungo1383G3023 Vigna mungo HOM05D007561 ORTHO05D007661 2.3e-06 58.5 87 43.7
Duzib177G0099 Durio zibethinus HOM05D007561 ORTHO05D007661 3.9e-06 57.8 534 25.1
FAN12G0994 Fragaria x ananassa HOM05D007561 ORTHO05D007661 3.9e-06 57.8 585 24.1
QL03p064352 Quercus lobata HOM05D002654 ORTHO05D002430 3.9e-06 57.8 569 22.3
MSTRG.6258 Avicennia marina HOM05D007561 ORTHO05D007661 5.0e-06 57.4 482 23.7
arahy.Tifrunner.gnm1.ann1.63G1Z6 Arachis hypogaea HOM05D002654 ORTHO05D002430 6.6e-06 57.0 518 23.2
Nitab4.5_0000842g0040 Nicotiana tabacum HOM05D002654 ORTHO05D002430 6.6e-06 57.0 237 29.5
Phvul.001G109100 Phaseolus vulgaris HOM05D007561 ORTHO05D007661 8.6e-06 56.6 181 30.4
Psat2g120280 Pisum sativum HOM05D002654 ORTHO05D002430 8.6e-06 56.6 212 27.8
SEGI_09092 Sequoiadendron giganteum HOM05D035901 ORTHO05D007661 8.6e-06 56.6 187 28.3


User provided reference genes

Program Settings