Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34161 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 1.5e-217 759.6 486 100.0
SEGI_29633 Sequoiadendron giganteum HOM05D008111 ORTHO05D003850 4.1e-143 512.3 382 79.6
SEGI_21276 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 4.4e-129 465.7 356 75.6
SEGI_21811 Sequoiadendron giganteum HOM05D008111 ORTHO05D002142 9.1e-127 458.0 342 80.4
SEGI_23941 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 2.7e-123 446.4 337 79.8
SEGI_15268 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 3.6e-123 446.0 340 80.6
SEGI_40546 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 3.0e-122 443.0 340 82.4
SEGI_18322 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 9.8e-121 438.0 372 73.1
SEGI_29901 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 6.1e-115 418.7 338 77.2
SEGI_21006 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 1.0e-114 417.9 337 72.4
SEGI_34833 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 8.3e-112 408.3 385 68.6
SEGI_25725 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 3.1e-111 406.4 338 77.5
SEGI_18552 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 1.2e-110 404.4 293 70.0
SEGI_14983 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 3.6e-107 392.9 384 64.6
SEGI_13499 Sequoiadendron giganteum HOM05D008111 ORTHO05D000159 1.0e-106 391.3 324 73.5
SEGI_20332 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 1.5e-100 370.9 329 68.1
SEGI_35584 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 1.1e-98 364.8 327 67.9
SEGI_27458 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 3.4e-97 359.8 292 74.0
SEGI_34954 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 5.4e-95 352.4 219 85.4
SEGI_29148 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 2.0e-94 350.5 224 75.4
SEGI_33733 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 2.0e-94 350.5 271 81.2
SEGI_16027 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 7.8e-94 348.6 350 63.1
SEGI_24645 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 1.5e-92 344.4 230 72.6
SEGI_09471 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 5.6e-92 342.4 294 73.5
SEGI_32146 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 5.6e-92 342.4 268 81.3
SEGI_28777 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 9.5e-92 341.7 328 70.4
SEGI_24324 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 2.8e-91 340.1 334 69.2
SEGI_39209 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 2.3e-90 337.0 278 74.8
SEGI_17337 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 1.5e-89 334.3 287 73.2
SEGI_37624 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 9.2e-87 325.1 263 75.3
SEGI_26762 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 9.9e-81 305.1 262 74.0
SEGI_22841 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 3.2e-79 300.1 268 70.5
SEGI_02515 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 4.6e-78 296.2 269 70.3
SEGI_22172 Sequoiadendron giganteum HOM05D008111 ORTHO05D386557 5.1e-77 292.7 237 77.2
SEGI_07287 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 6.6e-77 292.4 262 72.1
SEGI_12173 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 2.8e-75 287.0 263 71.9
SEGI_41249 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 1.1e-74 285.0 291 61.5
SEGI_14931 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 9.0e-74 282.0 209 65.6
SEGI_21895 Sequoiadendron giganteum HOM05D008111 ORTHO05D003912 4.9e-72 276.2 264 70.5
SEGI_06153 Sequoiadendron giganteum HOM05D008111 ORTHO05D385605 3.5e-70 270.0 256 74.2
SEGI_41056 Sequoiadendron giganteum HOM05D008111 ORTHO05D386214 3.9e-69 266.5 169 84.0
SEGI_34624 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 3.6e-67 260.0 277 69.0
SEGI_31033 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 4.9e-64 249.6 205 77.6
SEGI_40203 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 2.5e-60 237.3 156 75.0
SEGI_37334 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 2.8e-59 233.8 211 78.7
SEGI_22651 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 1.4e-58 231.5 205 73.7
SEGI_06666 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 5.3e-58 229.6 262 65.3
SEGI_10118 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 9.9e-57 225.3 151 77.5
SEGI_11769 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 2.7e-54 217.2 145 77.2
SEGI_41094 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 1.6e-51 208.0 139 70.5
SEGI_04187 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 2.8e-51 207.2 150 74.7
SEGI_03981 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 3.1e-50 203.8 228 63.2
SEGI_04448 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 1.2e-46 191.8 212 65.6
SEGI_19829 Sequoiadendron giganteum HOM05D000121 ORTHO05D000102 3.9e-45 186.8 146 63.7
SEGI_02247 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 3.3e-44 183.7 215 60.9
SEGI_35927 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 9.0e-42 175.6 250 58.4
SEGI_16148 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 2.0e-41 174.5 199 64.3
SEGI_01589 Sequoiadendron giganteum HOM05D008111 ORTHO05D384599 3.8e-40 170.2 119 73.9
SEGI_29064 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 1.5e-36 158.3 193 48.2
SEGI_41043 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 5.7e-36 156.4 132 62.1
SEGI_18324 Sequoiadendron giganteum HOM05D000109 ORTHO05D010192 9.7e-36 155.6 165 53.3
SEGI_26350 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 1.1e-23 115.5 72 77.8
SEGI_15703 Sequoiadendron giganteum HOM05D013750 ORTHO05D385735 1.2e-22 112.1 88 64.8
SEGI_12443 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 1.5e-20 105.1 79 67.1
SEGI_14774 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 1.3e-19 102.1 71 73.2
SEGI_19309 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 3.7e-19 100.5 70 72.9
SEGI_01936 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 1.2e-17 95.5 70 68.6
SEGI_39294 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 5.9e-17 93.2 101 52.5
SEGI_21835 Sequoiadendron giganteum HOM05D050791 ORTHO05D385175 2.1e-14 84.7 132 44.7
SEGI_40829 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 3.6e-14 84.0 285 30.5
SEGI_03859 Sequoiadendron giganteum HOM05D000080 ORTHO05D000053 7.5e-12 76.3 89 50.6
SEGI_36802 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 7.0e-10 69.7 79 50.6
SEGI_19832 Sequoiadendron giganteum HOM05D008111 ORTHO05D011210 1.3e-08 65.5 95 40.0
SEGI_35117 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.9e-08 64.3 114 35.1
SEGI_14591 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 3.8e-08 63.9 78 39.7
SEGI_21570 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 3.8e-08 63.9 53 60.4
SEGI_01205 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 6.5e-08 63.2 78 41.0
SEGI_33973 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 6.5e-08 63.2 114 34.2
SEGI_38653 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 6.5e-08 63.2 114 35.1
SEGI_18505 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 8.5e-08 62.8 114 34.2
SEGI_39807 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 8.5e-08 62.8 114 34.2
SEGI_03182 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.1e-07 62.4 114 34.2
SEGI_21641 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.1e-07 62.4 114 34.2
RcHm_v2.0_Chr4g0414501 Rosa chinensis HOM05D002899 ORTHO05D010192 1.5e-07 62.0 43 55.8
SEGI_09653 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.5e-07 62.0 78 41.0
SEGI_12525 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.5e-07 62.0 78 41.0
SEGI_24652 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.5e-07 62.0 78 41.0
SEGI_40506 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.5e-07 62.0 78 41.0
SEGI_23817 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.9e-07 61.6 114 34.2
SEGI_13805 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.5e-07 61.2 114 34.2
SEGI_15176 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.5e-07 61.2 114 34.2
SEGI_16998 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.5e-07 61.2 114 34.2
SEGI_28893 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.5e-07 61.2 114 34.2
SEGI_30442 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.5e-07 61.2 114 34.2
SEGI_31503 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.5e-07 61.2 114 34.2
SEGI_33273 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.5e-07 61.2 114 34.2
SEGI_36063 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.5e-07 61.2 114 34.2
SEGI_38038 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.5e-07 61.2 114 34.2
SEGI_26611 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 3.2e-07 60.8 114 34.2
SEGI_19004 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 4.2e-07 60.5 78 39.7
Manes.09G130600 Manihot esculenta HOM05D002899 ORTHO05D003850 5.5e-07 60.1 79 40.5
Nitab4.5_0009225g0010 Nicotiana tabacum HOM05D002899 ORTHO05D003850 5.5e-07 60.1 77 40.3
Lju926C12T4 Lonicera japonica HOM05D002899 ORTHO05D003850 7.2e-07 59.7 75 37.3
PGSC0003DMG400014409 Solanum tuberosum HOM05D002899 ORTHO05D003850 7.2e-07 59.7 79 41.8
GSVIVG01024262001 Vitis vinifera HOM05D002899 ORTHO05D003850 7.2e-07 59.7 42 59.5
Atru.chr6.914 Acer truncatum HOM05D002899 ORTHO05D003850 9.4e-07 59.3 75 38.7
Potri.013G076000 Populus trichocarpa HOM05D002899 ORTHO05D003850 9.4e-07 59.3 75 41.3
Sabra13G0065200 Salix brachista HOM05D002899 ORTHO05D003850 9.4e-07 59.3 108 35.2
Atru.chr12.1814 Acer truncatum HOM05D002899 ORTHO05D003850 1.2e-06 58.9 77 40.3
ClCG02G007900 Citrullus lanatus HOM05D002899 ORTHO05D003850 1.2e-06 58.9 75 44.0
CSS0044416 Camellia sinensis var. sinensis HOM05D002899 ORTHO05D003850 2.1e-06 58.2 75 40.0
Duzib128G1532 Durio zibethinus HOM05D002899 ORTHO05D003850 2.1e-06 58.2 75 41.3
FvH4_4g13670 Fragaria vesca HOM05D002899 ORTHO05D010192 2.1e-06 58.2 54 48.1
Lj9C24T10 Lonicera japonica HOM05D002899 ORTHO05D003850 2.1e-06 58.2 75 37.3
SEGI_02942 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.1e-06 58.2 113 32.7
SEGI_25006 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.1e-06 58.2 114 33.3
Solyc10g005990.4 Solanum lycopersicum HOM05D002899 ORTHO05D003850 2.1e-06 58.2 79 41.8
Sopen10g001950 Solanum pennellii HOM05D002899 ORTHO05D003850 2.1e-06 58.2 79 41.8
AUR62014872 Chenopodium quinoa HOM05D002899 ORTHO05D003850 2.7e-06 57.8 42 57.1
MELO3C024757.2 Cucumis melo HOM05D002899 ORTHO05D003850 2.7e-06 57.8 60 48.3
Nn3g21896 Nelumbo nucifera HOM05D002899 ORTHO05D003850 2.7e-06 57.8 75 41.3
SEGI_41165 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 2.7e-06 57.8 78 39.7
BcaB02g06683 Brassica carinata HOM05D002899 ORTHO05D003850 3.6e-06 57.4 42 57.1
CAN.G492.37 Capsicum annuum HOM05D002899 ORTHO05D003850 3.6e-06 57.4 80 41.2
CiPaw.05G210800 Carya illinoinensis HOM05D002899 ORTHO05D003850 3.6e-06 57.4 75 40.0
Ciclev10030682m.g Citrus clementina HOM05D002899 ORTHO05D003850 3.6e-06 57.4 96 36.5
Medtr8g010350 Medicago truncatula HOM05D002899 ORTHO05D003850 3.6e-06 57.4 43 55.8
PGR142G0302 Punica granatum HOM05D002899 ORTHO05D003850 3.6e-06 57.4 45 55.6
SHI02598 Sapria himalayana HOM05D002899 ORTHO05D003850 3.6e-06 57.4 75 41.3
MSTRG.8559 Avicennia marina HOM05D002899 ORTHO05D003850 4.7e-06 57.0 42 57.1
ECA247G0541 Erigeron canadensis HOM05D002899 ORTHO05D003850 4.7e-06 57.0 55 50.9
Thhalv10006789m.g Eutrema salsugineum HOM05D002899 ORTHO05D003850 4.7e-06 57.0 42 54.8
Gohir.D10G191600 Gossypium hirsutum HOM05D002899 ORTHO05D003850 4.7e-06 57.0 42 57.1
Gorai.011G214400 Gossypium raimondii HOM05D002899 ORTHO05D003850 4.7e-06 57.0 42 57.1
SEGI_03250 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 4.7e-06 57.0 114 33.3
SEGI_14447 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 4.7e-06 57.0 114 32.5
Thecc.05G227100 Theobroma cacao HOM05D002899 ORTHO05D003850 4.7e-06 57.0 75 40.0
unitig_21.g20691 Utricularia gibba HOM05D002899 ORTHO05D003850 4.7e-06 57.0 46 54.3
AUR62030668 Chenopodium quinoa HOM05D002899 ORTHO05D003850 6.1e-06 56.6 42 57.1
Cc05_g11170 Coffea canephora HOM05D002899 ORTHO05D003850 6.1e-06 56.6 77 40.3
CsaV3_2G035840 Cucumis sativus L. HOM05D002899 ORTHO05D003850 6.1e-06 56.6 75 41.3
FAN04G0489 Fragaria x ananassa HOM05D002899 ORTHO05D003850 6.1e-06 56.6 75 37.3
Peaxi162Scf01026g00001 Petunia axillaris HOM05D002899 ORTHO05D003850 6.1e-06 56.6 63 44.4
Sabra19G0053900 Salix brachista HOM05D002899 ORTHO05D003850 6.1e-06 56.6 75 37.3
TWI38G1169 Tripterygium wilfordii HOM05D002899 ORTHO05D003850 6.1e-06 56.6 46 54.3
CDE05G1238 Ceratophyllum demersum HOM05D002899 ORTHO05D003850 8.0e-06 56.2 44 52.3
Dinv04696 Davidia involucrata HOM05D002899 ORTHO05D003850 8.0e-06 56.2 42 54.8
Gohir.A11G221200 Gossypium hirsutum HOM05D002899 ORTHO05D003850 8.0e-06 56.2 75 41.3
Gohir.D11G234700 Gossypium hirsutum HOM05D002899 ORTHO05D003850 8.0e-06 56.2 75 41.3
Gorai.007G247300 Gossypium raimondii HOM05D002899 ORTHO05D003850 8.0e-06 56.2 75 41.3
Hma1.2p1_1059F.1_g253030 Hydrangea macrophylla HOM05D002899 ORTHO05D003850 8.0e-06 56.2 42 54.8
Lj5P331T27 Lonicera japonica HOM05D002899 ORTHO05D003850 8.0e-06 56.2 42 54.8
MD08G1250100 Malus domestica HOM05D002899 ORTHO05D003850 8.0e-06 56.2 42 57.1
MD15G1445100 Malus domestica HOM05D002899 ORTHO05D003850 8.0e-06 56.2 42 57.1
Sed0003802 Sechium edule HOM05D002899 ORTHO05D003850 8.0e-06 56.2 42 57.1
Sc06g0010130 Simmondsia chinensis HOM05D002899 ORTHO05D003850 8.0e-06 56.2 37 62.2
Sc09g0008520 Simmondsia chinensis HOM05D002899 ORTHO05D003850 8.0e-06 56.2 37 62.2
Sc11g0002190 Simmondsia chinensis HOM05D002899 ORTHO05D003850 8.0e-06 56.2 37 62.2
THA.LOC104823791 Tarenaya hassleriana HOM05D002899 ORTHO05D003850 8.0e-06 56.2 58 48.3


User provided reference genes

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