Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34135 Sequoiadendron giganteum HOM05D000306 ORTHO05D030075 3.5e-88 328.2 158 100.0
AUR62040301 Chenopodium quinoa HOM05D000306 ORTHO05D007657 3.3e-25 119.0 91 68.1
Hund00645 Selenicereus undatus HOM05D000306 ORTHO05D007657 3.3e-25 119.0 69 82.6
MELO3C004085.2 Cucumis melo HOM05D000306 ORTHO05D007657 4.3e-25 118.6 69 84.1
CsaV3_2G008000 Cucumis sativus L. HOM05D000306 ORTHO05D007657 4.3e-25 118.6 69 84.1
Thecc.09G168500 Theobroma cacao HOM05D000306 ORTHO05D007657 4.3e-25 118.6 69 85.5
ClCG11G012530 Citrullus lanatus HOM05D000306 ORTHO05D007657 5.6e-25 118.2 69 84.1
Sc14g0001220 Simmondsia chinensis HOM05D000306 ORTHO05D007657 5.6e-25 118.2 69 82.6
Hma1.2p1_1423F.1_g282590 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 7.3e-25 117.9 69 82.6
Hma1.2p1_3301F.1_g335020 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 7.3e-25 117.9 69 82.6
PSO063G6265 Papaver somniferum HOM05D000306 ORTHO05D007657 7.3e-25 117.9 69 84.1
PSO782G2546 Papaver somniferum HOM05D000306 ORTHO05D007657 7.3e-25 117.9 69 84.1
Potri.018G095700 Populus trichocarpa HOM05D000306 ORTHO05D007657 7.3e-25 117.9 69 82.6
AUR62039995 Chenopodium quinoa HOM05D000306 ORTHO05D007657 9.5e-25 117.5 78 75.6
Cc06_g13490 Coffea canephora HOM05D000306 ORTHO05D007657 9.5e-25 117.5 69 81.2
arahy.Tifrunner.gnm1.ann1.2QW3Q9 Arachis hypogaea HOM05D000306 ORTHO05D007657 1.2e-24 117.1 69 81.2
Hund00646 Selenicereus undatus HOM05D000306 ORTHO05D007657 1.2e-24 117.1 69 82.6
Solyc07g006780.3 Solanum lycopersicum HOM05D000306 ORTHO05D007657 1.2e-24 117.1 69 78.3
Sopen07g002880 Solanum pennellii HOM05D000306 ORTHO05D007657 1.2e-24 117.1 69 78.3
Duzib150G0020 Durio zibethinus HOM05D000306 ORTHO05D007657 1.6e-24 116.7 69 84.1
Gohir.A05G005700 Gossypium hirsutum HOM05D000306 ORTHO05D007657 1.6e-24 116.7 69 84.1
Gohir.D05G006400 Gossypium hirsutum HOM05D000306 ORTHO05D007657 1.6e-24 116.7 69 84.1
Gorai.009G006500 Gossypium raimondii HOM05D000306 ORTHO05D007657 1.6e-24 116.7 69 84.1
DCAR_020115 Daucus carota HOM05D000306 ORTHO05D007657 2.1e-24 116.3 69 81.2
PGR142G2969 Punica granatum HOM05D000306 ORTHO05D007657 2.1e-24 116.3 69 81.2
PGSC0003DMG400018753 Solanum tuberosum HOM05D000306 ORTHO05D007657 2.1e-24 116.3 69 78.3
Sabra18G0081600 Salix brachista HOM05D000306 ORTHO05D007657 2.8e-24 115.9 69 81.2
Actinidia17107 Actinidia chinensis HOM05D000306 ORTHO05D007657 3.6e-24 115.5 69 79.7
EL10Ac8g18267 Beta vulgaris HOM05D000306 ORTHO05D007657 3.6e-24 115.5 69 81.2
BcaNung00538 Brassica carinata HOM05D000306 ORTHO05D007657 3.6e-24 115.5 69 82.6
A03p59750 Brassica napus HOM05D000306 ORTHO05D007657 3.6e-24 115.5 69 82.6
C07p57810 Brassica napus HOM05D000306 ORTHO05D007657 3.6e-24 115.5 69 82.6
BolC7t46241H Brassica oleracea HOM05D000306 ORTHO05D007657 3.6e-24 115.5 69 82.6
BraA03t15029Z Brassica rapa HOM05D000306 ORTHO05D007657 3.6e-24 115.5 69 82.6
Dinv42746 Davidia involucrata HOM05D000306 ORTHO05D007657 3.6e-24 115.5 69 79.7
Dinv43355 Davidia involucrata HOM05D000306 ORTHO05D007657 3.6e-24 115.5 69 79.7
Thhalv10024769m.g Eutrema salsugineum HOM05D000306 ORTHO05D007657 3.6e-24 115.5 69 82.6
Hma1.2p1_0342F.1_g130620 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 3.6e-24 115.5 69 79.7
HanXRQChr03g0068931 Helianthus annuus HOM05D000306 ORTHO05D007657 4.7e-24 115.2 69 84.1
CAN.G584.11 Capsicum annuum HOM05D000306 ORTHO05D007657 6.2e-24 114.8 69 76.8
Migut.J01462 Erythranthe guttata HOM05D000306 ORTHO05D007657 6.2e-24 114.8 69 79.7
Pp3c23_15560 Physcomitrium patens HOM05D000306 ORTHO05D007657 8.0e-24 114.4 69 79.7
AL7G21840 Arabidopsis lyrata HOM05D000306 ORTHO05D007657 1.0e-23 114.0 69 81.2
AT4G30310 Arabidopsis thaliana HOM05D000306 ORTHO05D007657 1.0e-23 114.0 69 81.2
CSS0004024 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D007657 1.0e-23 114.0 69 76.8
CSS0008880 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D007657 1.0e-23 114.0 69 76.8
Sp7g28180 Schrenkiella parvula HOM05D000306 ORTHO05D007657 1.0e-23 114.0 69 81.2
CARHR238220 Cardamine hirsuta HOM05D000306 ORTHO05D007657 1.4e-23 113.6 69 81.2
Medtr4g128640 Medicago truncatula HOM05D000306 ORTHO05D007657 1.4e-23 113.6 69 81.2
CANSAT11G0744 Cannabis sativa HOM05D000306 ORTHO05D007657 1.8e-23 113.2 69 78.3
Manes.06G026700 Manihot esculenta HOM05D000306 ORTHO05D007657 1.8e-23 113.2 69 81.2
Os02g0177900 Oryza sativa ssp. japonica HOM05D000306 ORTHO05D007657 1.8e-23 113.2 69 79.7
Sed0007717 Sechium edule HOM05D000306 ORTHO05D007657 1.8e-23 113.2 69 81.2
FvH4_4g09080 Fragaria vesca HOM05D000306 ORTHO05D007657 2.3e-23 112.8 69 78.3
FAN17G2452 Fragaria x ananassa HOM05D000306 ORTHO05D007657 2.3e-23 112.8 69 78.3
FAN22G1929 Fragaria x ananassa HOM05D000306 ORTHO05D007657 2.3e-23 112.8 69 78.3
Lj4g0000904 Lotus japonicus HOM05D000306 ORTHO05D007657 2.3e-23 112.8 69 78.3
MD13G1267100 Malus domestica HOM05D000306 ORTHO05D007657 2.3e-23 112.8 69 78.3
Phvul.003G148000 Phaseolus vulgaris HOM05D000306 ORTHO05D007657 2.3e-23 112.8 69 79.7
HPP92_013461 Vanilla planifolia HOM05D000306 ORTHO05D007657 2.3e-23 112.8 69 76.8
Nn8g40502 Nelumbo nucifera HOM05D000306 ORTHO05D007657 3.1e-23 112.5 69 82.6
Nitab4.5_0000244g0290 Nicotiana tabacum HOM05D000306 ORTHO05D007657 3.1e-23 112.5 68 76.5
Nitab4.5_0000937g0030 Nicotiana tabacum HOM05D000306 ORTHO05D007657 3.1e-23 112.5 68 76.5
Oeu042129.1 Olea europaea HOM05D000306 ORTHO05D007657 3.1e-23 112.5 69 76.8
VMungo1215G2115 Vigna mungo HOM05D000306 ORTHO05D007657 3.1e-23 112.5 69 76.8
Carub.0007s1029 Capsella rubella HOM05D000306 ORTHO05D007657 4.0e-23 112.1 69 79.7
Eucgr.C00188 Eucalyptus grandis HOM05D000306 ORTHO05D007657 4.0e-23 112.1 69 78.3
TWI34G1080 Tripterygium wilfordii HOM05D000306 ORTHO05D007657 4.0e-23 112.1 68 79.4
GSVIVG01029150001 Vitis vinifera HOM05D000306 ORTHO05D007657 4.0e-23 112.1 69 75.4
ECA240G1428 Erigeron canadensis HOM05D000306 ORTHO05D005993 5.2e-23 111.7 69 81.2
RcHm_v2.0_Chr4g0403081 Rosa chinensis HOM05D000306 ORTHO05D007657 5.2e-23 111.7 69 78.3
Ciclev10007754m.g Citrus clementina HOM05D000306 ORTHO05D007657 6.8e-23 111.3 69 76.8
ECA240G0310 Erigeron canadensis HOM05D000306 ORTHO05D007657 6.8e-23 111.3 69 81.2
FAN12G4153 Fragaria x ananassa HOM05D000306 ORTHO05D007657 6.8e-23 111.3 69 76.8
vmacro13107 Vaccinium macrocarpon HOM05D000306 ORTHO05D007657 6.8e-23 111.3 68 76.5
Zm00001eb069070 Zea mays HOM05D000306 ORTHO05D007657 6.8e-23 111.3 69 78.3
ATR0580G308 Amborella trichopoda HOM05D000306 ORTHO05D007657 8.9e-23 110.9 73 75.3
Ca_21206_v3 Cicer arietinum L. HOM05D000306 ORTHO05D007657 8.9e-23 110.9 69 78.3
Lalb_Chr07g0180291 Lupinus albus HOM05D000306 ORTHO05D007657 8.9e-23 110.9 69 78.3
Aqoxy7G03118 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 1.2e-22 110.5 68 79.4
Peaxi162Scf00050g00633 Petunia axillaris HOM05D000306 ORTHO05D007657 1.2e-22 110.5 68 75.0
Aa31LG2G20220 Aethionema arabicum HOM05D000306 ORTHO05D007657 1.5e-22 110.2 71 77.5
MBI16_g41815_MAGBIO Magnolia biondii HOM05D000306 ORTHO05D007657 1.5e-22 110.2 69 79.7
Lj9A688T83 Lonicera japonica HOM05D000306 ORTHO05D007657 2.0e-22 109.8 78 71.8
Prupe.1G089400 Prunus persica HOM05D000306 ORTHO05D007657 2.0e-22 109.8 69 76.8
TPR.G5313 Trifolium pratense HOM05D000306 ORTHO05D007657 2.0e-22 109.8 69 76.8
AagrBONN_evm.TU.Sc2ySwM_117.626 Anthoceros agrestis HOM05D000306 ORTHO05D007657 2.6e-22 109.4 71 67.6
Glyma.17G065600 Glycine max HOM05D000306 ORTHO05D007657 2.6e-22 109.4 69 76.8
CiPaw.07G190000 Carya illinoinensis HOM05D000306 ORTHO05D007657 4.4e-22 108.6 68 76.5
Glyma.13G094600 Glycine max HOM05D000306 ORTHO05D007657 4.4e-22 108.6 69 76.8
Nn2g12665 Nelumbo nucifera HOM05D000306 ORTHO05D007657 4.4e-22 108.6 69 76.8
QL02p097271 Quercus lobata HOM05D000306 ORTHO05D007657 4.4e-22 108.6 68 75.0
THA.LOC104803506 Tarenaya hassleriana HOM05D000306 ORTHO05D007657 4.4e-22 108.6 69 76.8
SEGI_35715 Sequoiadendron giganteum HOM05D001068 ORTHO05D003481 5.8e-22 108.2 50 94.0
Lsat_1_v5_gn_7_54281 Lactuca sativa HOM05D000306 ORTHO05D007657 1.3e-21 107.1 69 78.3
Cpa.g.sc95.65 Carica papaya HOM05D000306 ORTHO05D007657 2.9e-21 105.9 68 77.9
Haze_22120 Corylus avellana HOM05D000306 ORTHO05D007657 4.9e-21 105.1 68 76.5
Mapoly0003s0282 Marchantia polymorpha HOM05D000306 ORTHO05D007657 2.4e-20 102.8 69 69.6
CDE04G1293 Ceratophyllum demersum HOM05D000306 ORTHO05D007657 1.7e-13 80.1 69 62.3
MD07G1169000 Malus domestica HOM05D000306 ORTHO05D030075 4.1e-12 75.5 56 71.4
Rhsim01G0007000 Rhododendron simsii HOM05D000306 ORTHO05D007657 6.6e-10 68.2 43 74.4
Cfa013520 Carpinus fangiana HOM05D000306 ORTHO05D007657 7.3e-09 64.7 44 72.7
SMO239G0169 Selaginella moellendorffii HOM05D000306 ORTHO05D007657 3.6e-08 62.4 41 75.6
QL02p097186 Quercus lobata HOM05D000306 ORTHO05D030075 8.9e-07 57.8 41 68.3
SEGI_24935 Sequoiadendron giganteum HOM05D020712 ORTHO05D015571 1.5e-06 57.0 72 43.1
SEGI_09452 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 3.4e-06 55.8 111 38.7


User provided reference genes

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